RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SPPL3Q8TCT6 385 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 LINC01599Q8WXQ3 324 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 RSPH1Q8WYR4 309 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 UIMC1Q96RL1 719 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CDCA3Q99618 268 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 ELAC1Q9H777 363 aaKnown RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 KLF18A0A0U1RQI7 1052 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 MAGEB2O15479 319 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 TBX10O75333 385 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 TMOD1P28289 359 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CRYBB1P53674 252 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 TMEM62Q0P6H9 643 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CAMK1Q14012 370 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 PFKFB3Q16875 520 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 RAB11FIP4Q86YS3 637 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CCDC60Q8IWA6 550 aaPredicted RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 CKAP2LQ8IYA6 745 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 REXO1Q8N1G1 1221 aaKnown RBP10.92□□□□□ -0.66
LRTM1-201ENST00000273286 SMRP1Q8NCR6 262 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 BICD2Q8TD16 824 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 POF1BQ8WVV4 589 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 FAM167AQ96KS9 214 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 ZMYND12Q9H0C1 365 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 MIR1-1HGQ9H1L0 117 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 ERVK-5Q9HDB9 667 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 RGS18Q9NS28 235 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 TMEM161AQ9NX61 479 aa10.92□□□□□ -0.66
LRTM1-201ENST00000273286 IGLV3-22A0A075B6J6 115 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 CCNE2O96020 404 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
LRTM1-201ENST00000273286 METAP2P50579 478 aaKnown RBP eCLIP10.91□□□□□ -0.66
LRTM1-201ENST00000273286 DLX2Q07687 328 aaPredicted RBP10.91□□□□□ -0.66
LRTM1-201ENST00000273286 SPOUT1Q5T280 376 aaKnown RBP10.91□□□□□ -0.66
LRTM1-201ENST00000273286 CDKAL1Q5VV42 579 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 SWSAP1Q6NVH7 229 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 C22orf34Q6ZV56 151 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 KIAA0319LQ8IZA0 1049 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 CCDC148Q8NFR7 591 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 RIN3Q8TB24 985 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 TRAPPC12Q8WVT3 735 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 CRYGNQ8WXF5 182 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 MSLNLQ96KJ4 702 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 HSPA12BQ96MM6 686 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 PRRX2Q99811 253 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 ADAM2Q99965 735 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 ZNF577Q9BSK1 485 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 TMX1Q9H3N1 280 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 TLR9Q9NR96 1032 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 PARP2Q9UGN5 583 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
LRTM1-201ENST00000273286 GINS2Q9Y248 185 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 PCDHA10Q9Y5I2 948 aa10.91□□□□□ -0.66
LRTM1-201ENST00000273286 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 C9IYK1 514 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 GFRA2O00451 464 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 CDC45O75419 566 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 ATF7P17544 494 aaPredicted RBP10.9□□□□□ -0.66
LRTM1-201ENST00000273286 LAG3P18627 525 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 PPM1AP35813 382 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 NRIP1P48552 1158 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 AKAP17AQ02040 695 aaKnown RBP10.9□□□□□ -0.66
LRTM1-201ENST00000273286 PAN2Q504Q3 1202 aaKnown RBP10.9□□□□□ -0.66
LRTM1-201ENST00000273286 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
LRTM1-201ENST00000273286 BMP8AQ7Z5Y6 402 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 FBXL16Q8N461 479 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 ZBTB10Q96DT7 871 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 PGBD1Q96JS3 809 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 MAP7D2Q96T17 732 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 TLE6Q9H808 572 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 ATP6V0A4Q9HBG4 840 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 ST3GAL5Q9UNP4 418 aa10.9□□□□□ -0.66
LRTM1-201ENST00000273286 NID2Q14112 1375 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 LOXHD1Q8IVV2 1947 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 TBKBP1A7MCY6 615 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 DDX39AO00148 427 aaKnown RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 FGF18O76093 207 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 C22orf31O95567 290 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 TFE3P19532 575 aaPredicted RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 DNAJB1P25685 340 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 CIITAP33076 1130 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 PSMD2Q13200 908 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 CLUL1Q15846 466 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 TMEM266Q2M3C6 531 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 ZNF648Q5T619 568 aaPredicted RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 THNSL1Q8IYQ7 743 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 EDAQ92838 391 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 C22orf23Q9BZE7 217 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 TMEM117Q9H0C3 514 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 ATP13A1Q9HD20 1204 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 NGRNQ9NPE2 291 aaKnown RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 SEMA3GQ9NS98 782 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms