RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 K7ENM7 598 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 M0QZQ0 153 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 OGTO15294 1046 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 TBCAO75347 108 aaKnown RBP10.58□□□□□ -0.72
VPS41-201ENST00000265745 OAZ2O95190 189 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 SEC24AO95486 1093 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 RHOP08100 348 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 NUDT7P0C024 238 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
VPS41-201ENST00000265745 ABCD1P33897 745 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 ARPP19P56211 112 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 GPC5P78333 572 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 CLIC6Q96NY7 704 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 RTP3Q9BQQ7 232 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 MSTO1Q9BUK6 570 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 BACH2Q9BYV9 841 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 ST6GALNAC4Q9H4F1 302 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 RPF1Q9H9Y2 349 aaKnown RBP10.58□□□□□ -0.72
VPS41-201ENST00000265745 CYP4F11Q9HBI6 524 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 CPSF3Q9UKF6 684 aaKnown RBP10.58□□□□□ -0.72
VPS41-201ENST00000265745 MAFFQ9ULX9 164 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 UBQLN1Q9UMX0 589 aaKnown RBP10.58□□□□□ -0.72
VPS41-201ENST00000265745 STYXL1Q9Y6J8 313 aa10.58□□□□□ -0.72
VPS41-201ENST00000265745 ZFHX2Q9C0A1 2572 aaPredicted RBP10.58□□□□□ -0.72
VPS41-201ENST00000265745 ANKRD63C9JTQ0 380 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 PROB1E7EW31 1015 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 PRRG1O14668 218 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 PTPN2P17706 415 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS41-201ENST00000265745 GUCY2FP51841 1108 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 PPP2R3AQ06190 1150 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 SLC5A9Q2M3M2 681 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 ZC2HC1CQ53FD0 456 aaPredicted RBP10.57□□□□□ -0.72
VPS41-201ENST00000265745 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 ZNF280DQ6N043 979 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 PHLDB3Q6NSJ2 640 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 POTEHQ6S545 545 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 MTSS1LQ765P7 747 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 ZNF720Q7Z2F6 126 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 CD302Q8IX05 232 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 CCDC105Q8IYK2 499 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 DTWD2Q8NBA8 298 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 OXCT2Q9BYC2 517 aaPredicted RBP10.57□□□□□ -0.72
VPS41-201ENST00000265745 TBC1D17Q9HA65 648 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 ARHGEF3Q9NR81 526 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 GDE1Q9NZC3 331 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 AFF4Q9UHB7 1163 aaKnown RBP10.57□□□□□ -0.72
VPS41-201ENST00000265745 CA14Q9ULX7 337 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
VPS41-201ENST00000265745 MRPS23Q9Y3D9 190 aaKnown RBP10.57□□□□□ -0.72
VPS41-201ENST00000265745 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
VPS41-201ENST00000265745 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
VPS41-201ENST00000265745 MYMKA6NI61 221 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 TISP43B9A030 160 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
VPS41-201ENST00000265745 MICAL2O94851 1124 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 LRG1P02750 347 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 ACOT2P49753 483 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 LILRA4P59901 499 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 CEBPZQ03701 1054 aaKnown RBP10.56□□□□□ -0.72
VPS41-201ENST00000265745 YWHAHQ04917 246 aaPredicted RBP10.56□□□□□ -0.72
VPS41-201ENST00000265745 ADCY1Q08828 1119 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 RRAGBQ5VZM2 374 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 JADE1Q6IE81 842 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 SLFN12LQ6IEE8 588 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 DYMQ7RTS9 669 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 BEST2Q8NFU1 509 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 ING5Q8WYH8 240 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 CORO1BQ9BR76 489 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 INSL5Q9Y5Q6 135 aa10.56□□□□□ -0.72
VPS41-201ENST00000265745 PTPRZ1P23471 2315 aaPredicted RBP10.56□□□□□ -0.72
VPS41-201ENST00000265745 ANO9A1A5B4 782 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
VPS41-201ENST00000265745 PIRO00625 290 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 ZNF197O14709 1029 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 PPEF2O14830 753 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SPTLC1O15269 473 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 ECI2O75521 394 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 NFICP08651 508 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 TYMPP19971 482 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 PAX3P23760 479 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 ADSSP30520 456 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 NBL1P41271 181 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 STARD6P59095 220 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 POU5F1Q01860 360 aaKnown RBP10.55□□□□□ -0.72
VPS41-201ENST00000265745 TWF1Q12792 350 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 GPR17Q13304 367 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
VPS41-201ENST00000265745 SLC44A4Q53GD3 710 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 PRSS36Q5K4E3 855 aa10.55□□□□□ -0.72
VPS41-201ENST00000265745 C9orf57Q5W0N0 161 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms