RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NINJ2Q9NZG7 142 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 RASAL2Q9UJF2 1139 aa9.28□□□□□ -0.92
VAPB-201ENST00000265619 ADGRA3Q8IWK6 1321 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 TCP10L2B9ZVM9 353 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 MAGEB2O15479 319 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 ATP6V1B1P15313 513 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 NFIAQ12857 509 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 ITGA7Q13683 1181 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 GRM2Q14416 872 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 C6orf183Q5T699 404 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 SP8Q8IXZ3 490 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 VPS52Q8N1B4 723 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 FNDC8Q8TC99 324 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 PYDC1Q8WXC3 89 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 GRAMD1AQ96CP6 724 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 PPP1R10Q96QC0 940 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 KLHL4Q9C0H6 718 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 UBA5Q9GZZ9 404 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 LARSQ9P2J5 1176 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 TAF1LQ8IZX4 1826 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 CICQ96RK0 1608 aaPredicted RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 A0A1W2PPM1 405 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 FAM47DPA6NHR8 397 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 CCDC22O60826 627 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 LDHAP00338 332 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 NAA20P61599 178 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 IL9RQ01113 521 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 NONOQ15233 471 aaKnown RBP eCLIP9.27□□□□□ -0.933e-10■■■■■ 27.6
VAPB-201ENST00000265619 PFKFB3Q16875 520 aaPredicted RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 B3GNT6Q6ZMB0 384 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 PDSS2Q86YH6 399 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 ZFPM1Q8IX07 1006 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 CCDC105Q8IYK2 499 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 GUF1Q8N442 669 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 DGCR14Q96DF8 476 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 THAP2Q9H0W7 228 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 TDRD3Q9H7E2 651 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 ADAMTS6Q9UKP5 1117 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 DAGLAQ9Y4D2 1042 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 KLRF2D3W0D1 207 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 TTLL1O95922 423 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 PORP16435 677 aaPredicted RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 HDAC4P56524 1084 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 SIX1Q15475 284 aaPredicted RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 PKN2Q16513 984 aaKnown RBP9.27□□□□□ -0.93
VAPB-201ENST00000265619 SH2D4BQ5SQS7 431 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 UGT2A3Q6UWM9 527 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 ACAD11Q709F0 780 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 C1orf54Q8WWF1 131 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 LZICQ8WZA0 190 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 MAML1Q92585 1016 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 PPP2R3CQ969Q6 453 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 EYA3Q99504 573 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 FAM118BQ9BPY3 351 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 FAIMQ9NVQ4 179 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 EURLQ9NYK6 297 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
VAPB-201ENST00000265619 KANSL1LA0AUZ9 987 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 GDF11O95390 407 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 TTC4O95801 387 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PEX2P28328 305 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PGM1P36871 562 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PFKPQ01813 784 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 SLC45A4Q5BKX6 768 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 FAM182AQ5T1J6 154 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 TMEM214Q6NUQ4 689 aaKnown RBP9.26□□□□□ -0.93
VAPB-201ENST00000265619 CAPN12Q6ZSI9 719 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 RASSF3Q86WH2 238 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PPM1KQ8N3J5 372 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 OR6Y1Q8NGX8 325 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 ATG4AQ8WYN0 398 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 BTBD6Q96KE9 485 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 CAMKK2Q96RR4 588 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 BCAS3Q9H6U6 928 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 A0A1W2PQ67 120 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 TTLL13PA6NNM8 815 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 H3BSA7 217 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 TMX2-CTNND1H3BSU7 103 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 C2CD2LO14523 706 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 SH3BP5O60239 455 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PDE5AO76074 875 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 BCRP11274 1271 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 CTNNA2P26232 953 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PON1P27169 355 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 EPS15P42566 896 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 DCTN2Q13561 401 aaKnown RBP9.26□□□□□ -0.93
VAPB-201ENST00000265619 LETM2Q2VYF4 491 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 GRAMD4Q6IC98 578 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 RHBDF2Q6PJF5 856 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 CCDC80Q76M96 950 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 FAM186BQ8IYM0 893 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 ZBED8Q8IZ13 594 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 PPP4R1Q8TF05 950 aa9.26□□□□□ -0.93
VAPB-201ENST00000265619 DDX12PQ92771 950 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms