RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 RIBC1Q8N443 379 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 DGCR14Q96DF8 476 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 ARPC5LQ9BPX5 153 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TMEM247A6NEH6 219 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 ALOX5P09917 674 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 COASYQ13057 564 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 METTL23Q86XA0 190 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TMEM35BQ8NCS4 154 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TRABDQ9H4I3 376 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CPDO75976 1380 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 AKAP6Q13023 2319 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 MYO3AQ8NEV4 1616 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 EVPLLA8MZ36 301 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 GOLGA8SH3BPF8 625 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PENKP01210 267 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 PRELPP51888 382 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 NAA20P61599 178 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TAB3Q8N5C8 712 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 BORCS5Q969J3 196 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 EME1Q96AY2 570 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CEP170P1Q96L14 293 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 RPF1Q9H9Y2 349 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 INO80Q9ULG1 1556 aaPredicted RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 ADCY6O43306 1168 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 LGR5O75473 907 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 TNFAIP8O95379 198 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 GSNP06396 782 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 HSD17B3P37058 310 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 GPS1Q13098 491 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 NLRP10Q86W26 655 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 PLD3Q8IV08 490 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 LRRC39Q96DD0 335 aa5.98□□□□□ -1.45
VCAN-201ENST00000265077 CHD2O14647 1828 aaKnown RBP5.98□□□□□ -1.45
VCAN-201ENST00000265077 PDLIM1O00151 329 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KLHL2O95198 593 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SCRN3Q0VDG4 424 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RHOT1Q8IXI2 618 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RAD54LQ92698 747 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 COX4I2Q96KJ9 171 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PUS3Q9BZE2 481 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 EHD4Q9H223 541 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TRNAU1APQ9NX07 287 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 COPG1Q9Y678 874 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 MEIS1O00470 390 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SEMA3DO95025 777 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PDIA5Q14554 519 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 MYBPC3Q14896 1274 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 NAT14Q8WUY8 206 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 EFHD2Q96C19 240 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 CLIC5Q9NZA1 410 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RNF103-CHMP3A0A140T963 221 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TTLL13PA6NNM8 815 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PHF2O75151 1096 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TFAMQ00059 246 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 SPIDRQ14159 915 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TJAP1Q5JTD0 557 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CMTM5Q96DZ9 223 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 FAM20AQ96MK3 541 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 MAGEB5Q9BZ81 275 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 AASDHPPTQ9NRN7 309 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 ETS2P15036 469 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 DDX5P17844 614 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 MTF1Q14872 753 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KIF19Q2TAC6 998 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 MB21D2Q8IYB1 491 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 CCNYQ8ND76 341 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 ANO3Q9BYT9 981 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GINM1Q9NU53 330 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KCND2Q9NZV8 630 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CLEC11AQ9Y240 323 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 MTO1Q9Y2Z2 717 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 LOC102724428A0A0B4J2F2 783 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 ZNF12P17014 697 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SIK1P57059 783 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TBC1D10BQ4KMP7 808 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 USP17L2Q6R6M4 530 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PBXIP1Q96AQ6 731 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KCNK16Q96T55 309 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 LBHD1Q9BQE6 289 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 SLC13A4Q9UKG4 626 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SPAG6O75602 509 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CCDC130P13994 396 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RASSF5Q8WWW0 418 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SYN2Q92777 582 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 DHRS1Q96LJ7 313 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 BEGAINQ9BUH8 593 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 BARHL2Q9NY43 387 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PTTG2Q9NZH5 202 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 VWA5AO00534 786 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RPL5P46777 297 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 KCNJ2P63252 427 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GRM4Q14833 912 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 NR1D2Q14995 579 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 ACAP2Q15057 778 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KYAT1Q16773 422 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KIAA1755Q5JYT7 1200 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SGMS1Q86VZ5 419 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 LCORLQ8N3X6 602 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GALNT6Q8NCL4 622 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RNF139Q8WU17 664 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms