RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 NLRP3Q96P20 1036 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 NUP85Q9BW27 656 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 DPH5Q9H2P9 285 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SPATA31A3Q5VYP0 1347 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 KRIT1O00522 736 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 IFIT3O14879 490 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ATP9BO43861 1147 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TTC4O95801 387 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 MFAP3P55082 362 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 YWHAGP61981 247 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SEL1L2Q5TEA6 688 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 C16orf71Q8IYS4 520 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 KRT35Q92764 455 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 DCUN1D5Q9BTE7 237 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CDH19Q9H159 772 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM105AQ9NUU6 356 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 UVRAGQ9P2Y5 699 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CPSF3Q9UKF6 684 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ERVK-11Q9UQG0 969 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM32AQ9Y421 112 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ADGRA3Q8IWK6 1321 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ILVBLA1L0T0 632 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TNPO2O14787 897 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SEMA3EO15041 775 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CHN1P15882 459 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ITIH1P19827 911 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TTKP33981 857 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SSTP61278 116 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CYP4F8P98187 520 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 DHX34Q14147 1143 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ATG14Q6ZNE5 492 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TTC6Q86TZ1 520 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 HIPK4Q8NE63 616 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 VANGL1Q8TAA9 524 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 MTBPQ96DY7 904 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 UROC1Q96N76 676 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ZMYND12Q9H0C1 365 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 IFT22Q9H7X7 185 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 LEMD3Q9Y2U8 911 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF335Q9H4Z2 1342 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TOP3BO95985 862 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ARFIP2P53365 341 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ZFP69Q49AA0 526 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TPTE2Q6XPS3 522 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 GIMAP8Q8ND71 665 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CPS1P31327 1500 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 RNF113AO15541 343 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ALDH1B1P30837 517 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 IREB2P48200 963 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ETV1P50549 477 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TPTEP56180 551 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 GCKRQ14397 625 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 HIC1Q14526 733 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC9C1Q4G0N8 1177 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 CENPUQ71F23 418 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 TICAM1Q8IUC6 712 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 SYCE1Q8N0S2 351 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 STX19Q8N4C7 294 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 NCOA7Q8NI08 942 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 FNDC8Q8TC99 324 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF496Q96IT1 587 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ALG1Q9BT22 464 aa7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF624Q9P2J8 865 aaPredicted RBP7.07□□□□□ -1.28
PDGFRA-201ENST00000257290 hCG_1642624A0A1W2PR95 340 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 FADS2P1A8MWK0 482 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SNPHO15079 494 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SIN3BO75182 1162 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 FKBP6O75344 327 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 VCLP18206 1134 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 IARSP41252 1262 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 BCAP31P51572 246 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PLD1Q13393 1074 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CLCA4Q14CN2 919 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ASZ1Q8WWH4 475 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 MTERF3Q96E29 417 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SENP7Q9BQF6 1050 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 GRIP2Q9C0E4 1043 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CLK4Q9HAZ1 481 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SCPEP1Q9HB40 452 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 XPO7Q9UIA9 1087 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 POLIQ9UNA4 740 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 A0A0J9YVX5 310 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CD4P01730 458 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PRKCBP05771 671 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CIITAP33076 1130 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 CLK3P49761 638 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 RPP38P78345 283 aaKnown RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 USF2Q15853 346 aaPredicted RBP7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 C6orf10Q5SRN2 563 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC9A4Q6AI14 798 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 ARMCX5Q6P1M9 558 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 BRINP3Q76B58 766 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 MIGA2Q7L4E1 593 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 PALB2Q86YC2 1186 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 MICU2Q8IYU8 434 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC17A8Q8NDX2 589 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 MTMR12Q9C0I1 747 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 RXFP1Q9HBX9 757 aa7.06□□□□□ -1.28
PDGFRA-201ENST00000257290 IL20Q9NYY1 176 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms