RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 CNBD2Q96M20 576 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 PCDHA3Q9Y5H8 950 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 FOXD2O60548 495 aaPredicted RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 CLPTM1O96005 669 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 NELFEP18615 380 aaKnown RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 ITIH2P19823 946 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 CTNNA2P26232 953 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 TSHZ1Q6ZSZ6 1077 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 ZNF564Q8TBZ8 553 aaPredicted RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 TCP10LQ8TDR4 215 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 ANLNQ9NQW6 1124 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 MROH7Q68CQ1 1323 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 KAT6AQ92794 2004 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 MIF4GDA9UHW6 222 aaKnown RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 SORBS2O94875 1100 aaKnown RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 CYP19A1P11511 503 aaPredicted RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 BGNP21810 368 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 PAX3P23760 479 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 SSTR3P32745 418 aaPredicted RBP19.31■□□□□ 0.68
PTPN12-201ENST00000248594 ARL4CP56559 192 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 GPC5P78333 572 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 STAT4Q14765 748 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 PDK3Q15120 406 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 PANX3Q96QZ0 392 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 HAPLN3Q96S86 360 aa19.31■□□□□ 0.68
PTPN12-201ENST00000248594 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 CALUO43852 315 aaPredicted RBP19.3■□□□□ 0.68
PTPN12-201ENST00000248594 TBCAO75347 108 aaKnown RBP19.3■□□□□ 0.68
PTPN12-201ENST00000248594 ETS1P14921 441 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 MECOMQ03112 1051 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 CYTH1Q15438 398 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 CCDC92Q53HC0 331 aaPredicted RBP19.3■□□□□ 0.68
PTPN12-201ENST00000248594 C1orf228Q6PIY5 440 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 TMEM110Q86TL2 294 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 KAT5Q92993 513 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 AGPAT1Q99943 283 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 RUSC1Q9BVN2 902 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 XPOTO43592 962 aaKnown RBP19.3■□□□□ 0.68
PTPN12-201ENST00000248594 CYP11B2P19099 503 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 PPIDQ08752 370 aaKnown RBP19.3■□□□□ 0.68
PTPN12-201ENST00000248594 DPY19L2Q6NUT2 758 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 LLGL2Q6P1M3 1020 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 PCIF1Q9H4Z3 704 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 TUT1Q9H6E5 874 aaKnown RBP19.3■□□□□ 0.68
PTPN12-201ENST00000248594 ZNF148Q9UQR1 794 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 ADGRA3Q8IWK6 1321 aa19.3■□□□□ 0.68
PTPN12-201ENST00000248594 LSM1O15116 133 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 CCDC166P0CW27 439 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 PDIA2Q13087 525 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 ERFEQ4G0M1 354 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 CBWD6Q4V339 395 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 CBWD3Q5JTY5 395 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 CBWD5Q5RIA9 395 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 B3GNT6Q6ZMB0 384 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 NCCRP1Q6ZVX7 275 aaPredicted RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 OSBPL8Q9BZF1 889 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 MANSC1Q9H8J5 431 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 SAR1AQ9NR31 198 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 KANSL3Q9P2N6 904 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 PHRF1Q9P1Y6 1649 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 NMT1P30419 496 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 SLC25A3Q00325 362 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 GRM4Q14833 912 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 CAVIN4Q5BKX8 364 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 KLHDC10Q6PID8 442 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 NANOGNBQ7Z5D8 188 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 DZIP1Q86YF9 867 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 RHOT2Q8IXI1 618 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 GDPD5Q8WTR4 605 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 PRPF18Q99633 342 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 TRAIPQ9BWF2 469 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 MRPL1Q9BYD6 325 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 BRD8Q9H0E9 1235 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 ZNF395Q9H8N7 513 aaPredicted RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 TYW1Q9NV66 732 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 RPL13P26373 211 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 GJA8P48165 433 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 C16orf72Q14CZ0 275 aa19.29■□□□□ 0.68
PTPN12-201ENST00000248594 RBMX2Q9Y388 322 aaKnown RBP19.29■□□□□ 0.68
PTPN12-201ENST00000248594 PI4K2BG5E9Z4 385 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 VCLP18206 1134 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 ADCY7P51828 1080 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 NAA20P61599 178 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 LMBRD2Q68DH5 695 aaPredicted RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 ARHGAP27Q6ZUM4 889 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 FRMD5Q7Z6J6 570 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 PRPF39Q86UA1 669 aaKnown RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 FAM111AQ96PZ2 611 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 BRIP1Q9BX63 1249 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 CAPN8A6NHC0 703 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 PCSK6P29122 969 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 DCTN2Q13561 401 aaKnown RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 CTC1Q2NKJ3 1217 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 NADK2Q4G0N4 442 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 ULK2Q8IYT8 1036 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 STKLD1Q8NE28 680 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 ABHD8Q96I13 439 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 REEP2Q9BRK0 252 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 INTS2Q9H0H0 1204 aaKnown RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 SLC7A8Q9UHI5 535 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms