RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 INO80BQ9C086 356 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 NEU2Q9Y3R4 380 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ATP8B3O60423 1300 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 PIK3R2O00459 728 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 CDH16O75309 829 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 LYPLA2O95372 231 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 IL9RQ01113 521 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 CCT6BQ92526 530 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SERPINB12Q96P63 405 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 DNPEPQ9ULA0 475 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SLX4Q8IY92 1834 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 PAEPP09466 180 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 MYBL1P10243 752 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 GARTP22102 1010 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 PDIA2Q13087 525 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF449Q6P9G9 518 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 LRRC71Q8N4P6 559 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 AGBL3Q8NEM8 1001 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ASAP3Q8TDY4 903 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 KLF6Q99612 283 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 CALN1Q9BXU9 219 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 AS3MTQ9HBK9 375 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 SRRM3A6NNA2 597 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 F8VP50 259 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 PLA2G6O60733 806 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 WNT7BP56706 349 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 IGBP1P78318 339 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 CNTN2Q02246 1040 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 NAA25Q14CX7 972 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 BBS9Q3SYG4 887 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 BBOF1Q8ND07 529 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF280CQ8ND82 737 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 RSAD2Q8WXG1 361 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 GPRASP2Q96D09 838 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 CDHR1Q96JP9 859 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 SMC6Q96SB8 1091 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 TMEM121Q9BTD3 319 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 KIAA1586Q9HCI6 787 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 PARVAQ9NVD7 372 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 NUB1Q9Y5A7 615 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 NOP56O00567 594 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 BANF1O75531 89 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 STAM2O75886 525 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 TJP3O95049 919 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 TCF4P15884 667 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 FEZF2Q8TBJ5 459 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 CFAP57Q96MR6 1250 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 SENP7Q9BQF6 1050 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 IVNS1ABPQ9Y6Y0 642 aa13.35□□□□□ -0.27
RAB3IP-201ENST00000247833 TBC1D12O60347 775 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 PSMA2P25787 234 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 BACE1P56817 501 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 MAMLD1Q13495 774 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 SIX1Q15475 284 aaPredicted RBP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 STXBP2Q15833 593 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 SPDYCQ5MJ68 293 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 ABRAQ8N0Z2 381 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF606Q8WXB4 792 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 N4BP2L2Q92802 583 aaPredicted RBP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 CENPTQ96BT3 561 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 GMLQ99445 158 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 KIF9Q9HAQ2 790 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 UTRNP46939 3433 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 IGF2BP3O00425 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 MAPK13O15264 365 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 SNX3O60493 162 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 ZACNQ401N2 412 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 KIRREL3Q8IZU9 778 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 LRRC8CQ8TDW0 803 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 FBF1Q8TES7 1133 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 DDX27Q96GQ7 796 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms