RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 HIST1H2AJQ99878 128 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 H2AFJQ9BTM1 129 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 IMPAD1Q9NX62 359 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ZBTB1Q9Y2K1 713 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 MAP3K4Q9Y6R4 1608 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 GOLGA8RI6L899 631 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 DPYSL4O14531 572 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF280CQ8ND82 737 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 NSL1Q96IY1 281 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 UBA6A0AVT1 1052 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 AIM2O14862 343 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 STRNO43815 780 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TRIP4Q15650 581 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 BTBD8Q5XKL5 378 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 DDHD1Q8NEL9 900 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 DDI1Q8WTU0 396 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 WNK4Q96J92 1243 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LRRC1Q9BTT6 524 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM9Q9C026 710 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SYBUQ9NX95 663 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 AGO2Q9UKV8 859 aaKnown RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 KCNK10P57789 538 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ADRM1Q16186 407 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SIRT2Q8IXJ6 389 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 APPL2Q8NEU8 664 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 CLMNQ96JQ2 1002 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LRRIQ3A6PVS8 624 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 MKRN4PQ13434 485 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LRRC36Q1X8D7 754 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TMEM154Q6P9G4 183 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ARHGAP27Q6ZUM4 889 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SGMS1Q86VZ5 419 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TTC30BQ8N4P2 665 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ARHGEF26Q96DR7 871 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ADAM33Q9BZ11 813 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TUFT1Q9NNX1 390 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ADGRA3Q8IWK6 1321 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 DISP1Q96F81 1524 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LRRC7Q96NW7 1537 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 XPO1O14980 1071 aaKnown RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 MTSS1O43312 755 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 CAND2O75155 1236 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ALBP02768 609 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 POLBP06746 335 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 FNTAP49354 379 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF200P98182 395 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 PDAP1Q13442 181 aaKnown RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 GRAPQ13588 217 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 NKX1-1Q15270 411 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 CLEC4GQ6UXB4 293 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 METTL16Q86W50 562 aaKnown RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 JAMLQ86YT9 394 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SLC35G2Q8TBE7 412 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 GRAPLQ8TC17 118 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 GINS4Q9BRT9 223 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 KIF20BQ96Q89 1820 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 CORO7P57737 925 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LAMC2Q13753 1193 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 GTF2H3Q13889 308 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 PDIA5Q14554 519 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 VEPH1Q14D04 833 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LINC00523Q86TU6 105 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF507Q8TCN5 953 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 VPS33BQ9H267 617 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 DLGAP2Q9P1A6 1054 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SPRP35270 261 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TMEM132DQ14C87 1099 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 LONRF1Q17RB8 773 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SPATA18Q8TC71 538 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 GPR101Q96P66 508 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 MED15Q96RN5 788 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 FKBP9O95302 570 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 FCGR1AP12314 374 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 FKBP9P1Q75LS8 142 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 MS4A14Q96JA4 679 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TMEM47Q9BQJ4 181 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM51Q9BSJ1 452 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 UGGT1Q9NYU2 1555 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 SPATA33Q96N06 139 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 EXOSC4Q9NPD3 245 aaKnown RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.06□□□□□ -1.28
CSMD2-201ENST00000241312 NEU2Q9Y3R4 380 aa7.06□□□□□ -1.28
CSMD2-201ENST00000241312 O00370 1275 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 NFIBO00712 420 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 RAD17O75943 681 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 PTK6Q13882 451 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 TTC39BQ5VTQ0 682 aaPredicted RBP7.05□□□□□ -1.28
CSMD2-201ENST00000241312 TRAPPC11Q7Z392 1133 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 DBNDD1Q9H9R9 158 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 PIH1D3Q9NQM4 214 aaKnown RBP7.05□□□□□ -1.28
CSMD2-201ENST00000241312 SMARCAL1Q9NZC9 954 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 GLI2P10070 1586 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 CASZ1Q86V15 1759 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 SYNDIG1LA6NDD5 238 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 RNF103O00237 685 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 PSTPIP1O43586 416 aa7.05□□□□□ -1.28
CSMD2-201ENST00000241312 SESN2P58004 480 aaPredicted RBP7.05□□□□□ -1.28
CSMD2-201ENST00000241312 IYDQ6PHW0 289 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms