RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 EURLQ9NYK6 297 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 PRKAG3Q9UGI9 489 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 BAIAP2L1Q9UHR4 511 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 PPP2R3BQ9Y5P8 575 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 CLTAP09496 248 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 FDX1P10109 184 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 EZRP15311 586 aaKnown RBP16.49■□□□□ 0.23
CTSD-201ENST00000236671 TAS2R40P59535 323 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 KCNJ2P63252 427 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 BNIP1Q12981 228 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 VGLL4Q14135 290 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 CCNG2Q16589 344 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 TAS1R3Q7RTX0 852 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 ANKS1BQ7Z6G8 1248 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 RELL1Q8IUW5 271 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 RMDN3Q96TC7 470 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 FAM118BQ9BPY3 351 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 MOV10L1Q9BXT6 1211 aaKnown RBP16.49■□□□□ 0.23
CTSD-201ENST00000236671 ECT2Q9H8V3 914 aa16.49■□□□□ 0.23
CTSD-201ENST00000236671 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.49■□□□□ 0.23
CTSD-201ENST00000236671 ARID2Q68CP9 1835 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 TESPA1A2RU30 521 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 ZNF862O60290 1169 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 CDH16O75309 829 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 STBD1O95210 358 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 NQO1P15559 274 aaKnown RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 ZNF268Q14587 947 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 BRDTQ58F21 947 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 CGB2Q6NT52 195 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 RHOT1Q8IXI2 618 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 KATNAL2Q8IYT4 538 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 GBP7Q8N8V2 638 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 CCDC89Q8N998 374 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 RDM1Q8NG50 284 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 GIMAP7Q8NHV1 300 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 CEP170P1Q96L14 293 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 TBK1Q9UHD2 729 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 ABT1Q9ULW3 272 aaKnown RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 NAALADL1Q9UQQ1 740 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 ARL2BPQ9Y2Y0 163 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 CFHP08603 1231 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 IBSPP21815 317 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 KLRC2P26717 231 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 DSG3P32926 999 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 NF2P35240 595 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 HUNKP57058 714 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 CLDN10P78369 228 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 FSTL1Q12841 308 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 ZKSCAN8Q15776 578 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 IZUMO3Q5VZ72 239 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 LMBRD2Q68DH5 695 aaPredicted RBP16.48■□□□□ 0.23
CTSD-201ENST00000236671 ZNF365Q70YC5 407 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 SAPCD2Q86UD0 394 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 BBOF1Q8ND07 529 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.231e-19■■■□□ 18.6
CTSD-201ENST00000236671 LPAR1Q92633 364 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 OSBPL8Q9BZF1 889 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 ELP3Q9H9T3 547 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 ATP6V0A4Q9HBG4 840 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 PCDHA10Q9Y5I2 948 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
CTSD-201ENST00000236671 ACO1P21399 889 aaKnown RBP16.47■□□□□ 0.23
CTSD-201ENST00000236671 WNT7BP56706 349 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 BPIFB4P59827 614 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 COPS2P61201 443 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 STAT4Q14765 748 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 ZACNQ401N2 412 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 TDRD10Q5VZ19 366 aaKnown RBP16.47■□□□□ 0.23
CTSD-201ENST00000236671 SEPT14Q6ZU15 432 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 SRRM1Q8IYB3 904 aaKnown RBP16.47■□□□□ 0.23
CTSD-201ENST00000236671 C9orf72Q96LT7 481 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 MAGEB18Q96M61 343 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 SENP7Q9BQF6 1050 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 C11orf70Q9BRQ4 267 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 XPNPEP1Q9NQW7 623 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 PDLIM7Q9NR12 457 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 GABBR1Q9UBS5 961 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 ACTL7BQ9Y614 415 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
CTSD-201ENST00000236671 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ALADP13716 330 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ELF1P32519 619 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 STX2P32856 288 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 NOMO3P69849 1222 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 MAMLD1Q13495 774 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 SPOPLQ6IQ16 392 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ARHGEF18Q6ZSZ5 1173 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 FITM2Q8N6M3 262 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.46■□□□□ 0.23
CTSD-201ENST00000236671 BICD1Q96G01 975 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms