RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 GYS1P13807 737 aa12.11□□□□□ -0.47
NOD1-201ENST00000222823 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
NOD1-201ENST00000222823 CDR2Q01850 454 aa12.11□□□□□ -0.47
NOD1-201ENST00000222823 CACNB2Q08289 660 aaPredicted RBP12.11□□□□□ -0.47
NOD1-201ENST00000222823 ZNF235Q14590 738 aa12.11□□□□□ -0.47
NOD1-201ENST00000222823 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
NOD1-201ENST00000222823 NIF3L1Q9GZT8 377 aa12.11□□□□□ -0.47
NOD1-201ENST00000222823 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
NOD1-201ENST00000222823 OLA1Q9NTK5 396 aaKnown RBP12.11□□□□□ -0.47
NOD1-201ENST00000222823 ZNF142P52746 1687 aaPredicted RBP12.11□□□□□ -0.47
NOD1-201ENST00000222823 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
NOD1-201ENST00000222823 RGPD5Q99666 1765 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 E5RI56 91 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 RAD51CO43502 376 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 CTSHP09668 335 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 MDH1P40925 334 aaKnown RBP12.1□□□□□ -0.47
NOD1-201ENST00000222823 HERVK_113P62684 666 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 MMGT1Q8N4V1 131 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ZNF446Q9NWS9 450 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 NAGPAQ9UK23 515 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 RAB21Q9UL25 225 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 UBA6A0AVT1 1052 aaPredicted RBP12.1□□□□□ -0.47
NOD1-201ENST00000222823 EXTL3O43909 919 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 GRAP2O75791 330 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ICAM1P05362 532 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 RBP3P10745 1247 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 CAP2P40123 477 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 VEPH1Q14D04 833 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 EFCAB12Q6NXP0 572 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 MOXD1Q6UVY6 613 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 GPRASP2Q96D09 838 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 RMDN1Q96DB5 314 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ATXN7L3BQ96GX2 97 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ZDHHC15Q96MV8 337 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 MED15Q96RN5 788 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
NOD1-201ENST00000222823 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
NOD1-201ENST00000222823 CYTH3O43739 400 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 MED24O75448 989 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 RALAP11233 206 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 KRT33BQ14525 404 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 GJB7Q6PEY0 223 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ANGPTL8Q6UXH0 198 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 USP38Q8NB14 1042 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 ERP44Q9BS26 406 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 FAM49BQ9NUQ9 324 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 TJP2Q9UDY2 1190 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 L3MBTL1Q9Y468 752 aa12.1□□□□□ -0.47
NOD1-201ENST00000222823 C3orf70A6NLC5 250 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 PPFIA2O75334 1257 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 IL18RAPO95256 599 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 RAD51Q06609 339 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 SYCP2LQ5T4T6 812 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
NOD1-201ENST00000222823 CARD9Q9H257 536 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ZC3H7BQ9UGR2 993 aaKnown RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 TCP11X1B4DZS4 312 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 DFFAO00273 331 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 CST8O60676 142 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 CCDC22O60826 627 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 CYP2C9P11712 490 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 CYP2B6P20813 491 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ELMOD1Q8N336 334 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 DUSP9Q99956 384 aaKnown RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 RUSC1Q9BVN2 902 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 GTF3C4Q9UKN8 822 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 TBX20Q9UMR3 447 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 CD4P01730 458 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 IL1R1P14778 569 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 PRLRP16471 622 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 STMN1P16949 149 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 GTF2H1P32780 548 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 PBX1P40424 430 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 KYNUQ16719 465 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
NOD1-201ENST00000222823 MTHFD1LQ6UB35 978 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ZNF677Q86XU0 584 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ARHGEF26Q96DR7 871 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 FAM161BQ96MY7 647 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms