RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 MYH16Q9H6N6 1097 aa7.16□□□□□ -1.26
SCN3A-210ENST00000640652 C11orf95C9JLR9 678 aaPredicted RBP7.16□□□□□ -1.26
SCN3A-210ENST00000640652 AAMPQ13685 434 aa7.16□□□□□ -1.26
SCN3A-210ENST00000640652 CHMP4BQ9H444 224 aaKnown RBP7.16□□□□□ -1.26
SCN3A-210ENST00000640652 LAS1LQ9Y4W2 734 aaKnown RBP7.16□□□□□ -1.26
SCN3A-210ENST00000640652 KIF20BQ96Q89 1820 aa7.16□□□□□ -1.26
SCN3A-210ENST00000640652 DHX29Q7Z478 1369 aaKnown RBP7.16□□□□□ -1.26
SCN3A-210ENST00000640652 PPLO60437 1756 aa7.15□□□□□ -1.26
SCN3A-210ENST00000640652 ANP32BQ92688 251 aaKnown RBP7.15□□□□□ -1.26
SCN3A-210ENST00000640652 MADDQ8WXG6 1647 aa7.15□□□□□ -1.26
SCN3A-210ENST00000640652 ABCC10Q5T3U5 1492 aa7.15□□□□□ -1.26
SCN3A-210ENST00000640652 MYO5BQ9ULV0 1848 aa7.15□□□□□ -1.26
SCN3A-210ENST00000640652 PDE4AP27815 886 aa7.15□□□□□ -1.27
SCN3A-210ENST00000640652 PNNQ9H307 717 aaKnown RBP7.15□□□□□ -1.27
SCN3A-210ENST00000640652 CGNL1Q0VF96 1302 aa7.15□□□□□ -1.27
SCN3A-210ENST00000640652 NKTRP30414 1462 aaKnown RBP7.14□□□□□ -1.27
SCN3A-210ENST00000640652 E9PSI1 815 aa7.14□□□□□ -1.27
SCN3A-210ENST00000640652 BLMP54132 1417 aaPredicted RBP7.14□□□□□ -1.27
SCN3A-210ENST00000640652 DENND4BO75064 1496 aaPredicted RBP7.14□□□□□ -1.27
SCN3A-210ENST00000640652 RGS3P49796 1198 aa7.14□□□□□ -1.27
SCN3A-210ENST00000640652 TRPM2O94759 1503 aa7.14□□□□□ -1.27
SCN3A-210ENST00000640652 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
SCN3A-210ENST00000640652 SCAF11Q99590 1463 aaKnown RBP7.14□□□□□ -1.27
SCN3A-210ENST00000640652 FAM161AQ3B820 660 aa7.14□□□□□ -1.27
SCN3A-210ENST00000640652 CHGAP10645 457 aaKnown RBP7.14□□□□□ -1.27
SCN3A-210ENST00000640652 ATP7AQ04656 1500 aa7.13□□□□□ -1.27
SCN3A-210ENST00000640652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.13□□□□□ -1.27
SCN3A-210ENST00000640652 CENPJQ9HC77 1338 aaPredicted RBP7.13□□□□□ -1.27
SCN3A-210ENST00000640652 LRPPRCP42704 1394 aaKnown RBP7.13□□□□□ -1.27
SCN3A-210ENST00000640652 ANKRD26Q9UPS8 1709 aa7.13□□□□□ -1.27
SCN3A-210ENST00000640652 CCDC184Q52MB2 194 aa7.13□□□□□ -1.27
SCN3A-210ENST00000640652 IFT172Q9UG01 1749 aa7.12□□□□□ -1.27
SCN3A-210ENST00000640652 DEPDC5O75140 1603 aa7.12□□□□□ -1.27
SCN3A-210ENST00000640652 MORC1Q86VD1 984 aa7.12□□□□□ -1.27
SCN3A-210ENST00000640652 MYOM1P52179 1685 aa7.12□□□□□ -1.27
SCN3A-210ENST00000640652 EXOC6Q8TAG9 804 aa7.12□□□□□ -1.27
SCN3A-210ENST00000640652 PMFBP1Q8TBY8 1022 aa7.12□□□□□ -1.27
SCN3A-210ENST00000640652 ABCC1P33527 1531 aa7.11□□□□□ -1.27
SCN3A-210ENST00000640652 MAP3K4Q9Y6R4 1608 aa7.11□□□□□ -1.27
SCN3A-210ENST00000640652 A2MP01023 1474 aa7.11□□□□□ -1.27
SCN3A-210ENST00000640652 ZC3H13Q5T200 1668 aaKnown RBP7.1□□□□□ -1.27
SCN3A-210ENST00000640652 DLG5Q8TDM6 1919 aa7.1□□□□□ -1.27
SCN3A-210ENST00000640652 ARAP3Q8WWN8 1544 aa7.1□□□□□ -1.27
SCN3A-210ENST00000640652 MSH5O43196 834 aa7.1□□□□□ -1.27
SCN3A-210ENST00000640652 CLTCL1P53675 1640 aa7.1□□□□□ -1.27
SCN3A-210ENST00000640652 L1TD1Q5T7N2 865 aaKnown RBP7.1□□□□□ -1.27
SCN3A-210ENST00000640652 GPRASP1Q5JY77 1395 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 GLIPR1L2Q4G1C9 344 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 FRAT1Q92837 279 aaPredicted RBP7.09□□□□□ -1.27
SCN3A-210ENST00000640652 CRBNQ96SW2 442 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 RWDD1Q9H446 243 aaPredicted RBP7.09□□□□□ -1.27
SCN3A-210ENST00000640652 STAG3Q9UJ98 1225 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 CFAP44Q96MT7 982 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 ZFYVE16Q7Z3T8 1539 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 TSPOAP1O95153 1857 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 RNF123Q5XPI4 1314 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 GOLGA6L22H0YM25 854 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 ITSN1Q15811 1721 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 DISP3Q9P2K9 1392 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 CLASP1Q7Z460 1538 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
SCN3A-210ENST00000640652 ADGRL1O94910 1474 aa7.08□□□□□ -1.28
SCN3A-210ENST00000640652 IPO8O15397 1037 aaKnown RBP7.08□□□□□ -1.28
SCN3A-210ENST00000640652 CALD1Q05682 793 aaKnown RBP7.08□□□□□ -1.28
SCN3A-210ENST00000640652 PIK3C2GO75747 1445 aa7.08□□□□□ -1.28
SCN3A-210ENST00000640652 PTMSP20962 102 aa7.08□□□□□ -1.28
SCN3A-210ENST00000640652 FANCAO15360 1455 aa7.08□□□□□ -1.28
SCN3A-210ENST00000640652 CASC1Q6TDU7 716 aa7.08□□□□□ -1.28
SCN3A-210ENST00000640652 ATP10AO60312 1499 aa7.08□□□□□ -1.28
SCN3A-210ENST00000640652 EVC2Q86UK5 1308 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 MAGI2Q86UL8 1455 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 MYO3AQ8NEV4 1616 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 HSCBQ8IWL3 235 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 RTEL1-TNFRSF6BF6WH68 1400 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 KIF3BO15066 747 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 GSE1Q14687 1217 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 PLIN1O60240 522 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 HECW2Q9P2P5 1572 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 PLCH2O75038 1416 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 ABCA6Q8N139 1617 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 PPP2R1AP30153 589 aa7.07□□□□□ -1.28
SCN3A-210ENST00000640652 WDR7Q9Y4E6 1490 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 TERF2IPQ9NYB0 399 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 SETBP1Q9Y6X0 1596 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 NEURL4Q96JN8 1562 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 USP32Q8NFA0 1604 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 HAP1P54257 671 aaPredicted RBP7.06□□□□□ -1.28
SCN3A-210ENST00000640652 NEUROD2Q15784 382 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 NBPF1Q3BBV0 1214 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 ADAMTS8Q9UP79 889 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 CAMSAP1Q5T5Y3 1602 aa7.06□□□□□ -1.28
SCN3A-210ENST00000640652 INO80Q9ULG1 1556 aaPredicted RBP7.05□□□□□ -1.28
SCN3A-210ENST00000640652 ZNF518AQ6AHZ1 1483 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 NPC1L1Q9UHC9 1359 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 TNNT2P45379 298 aaPredicted RBP7.05□□□□□ -1.28
SCN3A-210ENST00000640652 ESF1Q9H501 851 aaKnown RBP7.05□□□□□ -1.28
SCN3A-210ENST00000640652 ABCA9Q8IUA7 1624 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 EFCAB6Q5THR3 1501 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 CCDC146Q8IYE0 955 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 ARHGEF28Q8N1W1 1705 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms