RNA–Protein interactions for RNA: ENST00000638965.1

PAX6-247, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-247ENST00000638965 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
PAX6-247ENST00000638965 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
PAX6-247ENST00000638965 MROH2AA6NES4 1674 aa19.77■□□□□ 0.76
PAX6-247ENST00000638965 SAMD9LQ8IVG5 1584 aa19.76■□□□□ 0.75
PAX6-247ENST00000638965 MS4A4AQ96JQ5 239 aa19.76■□□□□ 0.75
PAX6-247ENST00000638965 NCOA1Q15788 1441 aa19.75■□□□□ 0.75
PAX6-247ENST00000638965 HS6ST3Q8IZP7 471 aa19.74■□□□□ 0.75
PAX6-247ENST00000638965 NLRP6P59044 892 aa19.73■□□□□ 0.75
PAX6-247ENST00000638965 BOLA1Q9Y3E2 137 aa19.73■□□□□ 0.75
PAX6-247ENST00000638965 CNTLNQ9NXG0 1405 aa19.73■□□□□ 0.75
PAX6-247ENST00000638965 FBXO22Q8NEZ5 403 aa19.72■□□□□ 0.75
PAX6-247ENST00000638965 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.72■□□□□ 0.75
PAX6-247ENST00000638965 PLXNC1O60486 1568 aa19.71■□□□□ 0.75
PAX6-247ENST00000638965 SLAIN1Q8ND83 568 aa19.71■□□□□ 0.75
PAX6-247ENST00000638965 MFRPQ9BY79 579 aa19.71■□□□□ 0.75
PAX6-247ENST00000638965 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
PAX6-247ENST00000638965 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
PAX6-247ENST00000638965 NPATQ14207 1427 aa19.7■□□□□ 0.74
PAX6-247ENST00000638965 SYCP2Q9BX26 1530 aa19.7■□□□□ 0.74
PAX6-247ENST00000638965 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
PAX6-247ENST00000638965 CHGAP10645 457 aaKnown RBP19.69■□□□□ 0.74
PAX6-247ENST00000638965 ILDR2Q71H61 639 aa19.69■□□□□ 0.74
PAX6-247ENST00000638965 ZNF142P52746 1687 aaPredicted RBP19.68■□□□□ 0.74
PAX6-247ENST00000638965 C3orf67Q6ZVT6 689 aa19.68■□□□□ 0.74
PAX6-247ENST00000638965 SPATA31D1Q6ZQQ2 1576 aa19.68■□□□□ 0.74
PAX6-247ENST00000638965 GPATCH8Q9UKJ3 1502 aaKnown RBP19.67■□□□□ 0.74
PAX6-247ENST00000638965 CAMSAP1Q5T5Y3 1602 aa19.67■□□□□ 0.74
PAX6-247ENST00000638965 AMER1Q5JTC6 1135 aaPredicted RBP19.67■□□□□ 0.74
PAX6-247ENST00000638965 G3V3G9 751 aa19.66■□□□□ 0.74
PAX6-247ENST00000638965 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
PAX6-247ENST00000638965 ATP7AQ04656 1500 aa19.66■□□□□ 0.74
PAX6-247ENST00000638965 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
PAX6-247ENST00000638965 TMEM121BQ9BXQ6 578 aaPredicted RBP19.65■□□□□ 0.74
PAX6-247ENST00000638965 MYT1LQ9UL68 1186 aa19.65■□□□□ 0.74
PAX6-247ENST00000638965 MYO3AQ8NEV4 1616 aa19.65■□□□□ 0.74
PAX6-247ENST00000638965 CLTCQ00610 1675 aaKnown RBP19.64■□□□□ 0.73
PAX6-247ENST00000638965 KIAA1107Q9UPP5 1409 aa19.61■□□□□ 0.73
PAX6-247ENST00000638965 ZMYM3Q14202 1370 aa19.6■□□□□ 0.73
PAX6-247ENST00000638965 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
PAX6-247ENST00000638965 CEP170BQ9Y4F5 1589 aaPredicted RBP19.59■□□□□ 0.73
PAX6-247ENST00000638965 ESF1Q9H501 851 aaKnown RBP19.59■□□□□ 0.73
PAX6-247ENST00000638965 RTN4Q9NQC3 1192 aaKnown RBP19.59■□□□□ 0.73
PAX6-247ENST00000638965 TCOF1Q13428 1488 aaKnown RBP19.59■□□□□ 0.73
PAX6-247ENST00000638965 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
PAX6-247ENST00000638965 SOCS7O14512 581 aa19.58■□□□□ 0.72
PAX6-247ENST00000638965 MICALL2Q8IY33 904 aa19.58■□□□□ 0.72
PAX6-247ENST00000638965 A2MP01023 1474 aa19.57■□□□□ 0.72
PAX6-247ENST00000638965 PLEKHH2Q8IVE3 1493 aa19.57■□□□□ 0.72
PAX6-247ENST00000638965 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
PAX6-247ENST00000638965 ADGBQ8N7X0 1667 aa19.56■□□□□ 0.72
PAX6-247ENST00000638965 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
PAX6-247ENST00000638965 HNRNPMP52272 730 aaKnown RBP eCLIP19.53■□□□□ 0.72
PAX6-247ENST00000638965 ZNF777Q9ULD5 760 aaPredicted RBP19.52■□□□□ 0.72
PAX6-247ENST00000638965 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
PAX6-247ENST00000638965 MBD5Q9P267 1494 aa19.51■□□□□ 0.71
PAX6-247ENST00000638965 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
PAX6-247ENST00000638965 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
PAX6-247ENST00000638965 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
PAX6-247ENST00000638965 CCNB3Q8WWL7 1395 aa19.47■□□□□ 0.71
PAX6-247ENST00000638965 FAM163AQ96GL9 167 aaPredicted RBP19.47■□□□□ 0.71
PAX6-247ENST00000638965 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
PAX6-247ENST00000638965 NEURL4Q96JN8 1562 aa19.47■□□□□ 0.71
PAX6-247ENST00000638965 A2ML1A8K2U0 1454 aa19.47■□□□□ 0.71
PAX6-247ENST00000638965 POLR1AO95602 1720 aaPredicted RBP19.46■□□□□ 0.71
PAX6-247ENST00000638965 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
PAX6-247ENST00000638965 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
PAX6-247ENST00000638965 FAM135AQ9P2D6 1515 aa19.43■□□□□ 0.7
PAX6-247ENST00000638965 LCE2DQ5TA82 110 aaPredicted RBP19.43■□□□□ 0.7
PAX6-247ENST00000638965 ZNF644Q9H582 1327 aaPredicted RBP19.43■□□□□ 0.7
PAX6-247ENST00000638965 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
PAX6-247ENST00000638965 PPP1R37O75864 691 aa19.42■□□□□ 0.7
PAX6-247ENST00000638965 GGT6Q6P531 493 aa19.41■□□□□ 0.7
PAX6-247ENST00000638965 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
PAX6-247ENST00000638965 TMEM92Q6UXU6 159 aa19.4■□□□□ 0.7
PAX6-247ENST00000638965 KDM5DQ9BY66 1539 aa19.4■□□□□ 0.7
PAX6-247ENST00000638965 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
PAX6-247ENST00000638965 PZPP20742 1482 aa19.39■□□□□ 0.69
PAX6-247ENST00000638965 SNPHO15079 494 aa19.38■□□□□ 0.69
PAX6-247ENST00000638965 DHX29Q7Z478 1369 aaKnown RBP19.38■□□□□ 0.69
PAX6-247ENST00000638965 VWDEQ8N2E2 1590 aa19.36■□□□□ 0.69
PAX6-247ENST00000638965 CPS1P31327 1500 aa19.35■□□□□ 0.69
PAX6-247ENST00000638965 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
PAX6-247ENST00000638965 ALKQ9UM73 1620 aa19.35■□□□□ 0.69
PAX6-247ENST00000638965 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
PAX6-247ENST00000638965 TNRQ92752 1358 aa19.34■□□□□ 0.69
PAX6-247ENST00000638965 SHANK2Q9UPX8 1470 aa19.33■□□□□ 0.68
PAX6-247ENST00000638965 DEPDC5O75140 1603 aa19.33■□□□□ 0.68
PAX6-247ENST00000638965 MED1Q15648 1581 aaPredicted RBP19.32■□□□□ 0.68
PAX6-247ENST00000638965 ARHGEF5Q12774 1597 aa19.32■□□□□ 0.68
PAX6-247ENST00000638965 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
PAX6-247ENST00000638965 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
PAX6-247ENST00000638965 RYDENQ9NUL5 291 aaKnown RBP19.31■□□□□ 0.68
PAX6-247ENST00000638965 RNF17Q9BXT8 1623 aaKnown RBP19.31■□□□□ 0.68
PAX6-247ENST00000638965 MED14O60244 1454 aa19.3■□□□□ 0.68
PAX6-247ENST00000638965 ST18O60284 1047 aa19.3■□□□□ 0.68
PAX6-247ENST00000638965 NLRP1Q9C000 1473 aa19.29■□□□□ 0.68
PAX6-247ENST00000638965 STRCP1A6NGW2 1772 aa19.27■□□□□ 0.68
PAX6-247ENST00000638965 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.67
PAX6-247ENST00000638965 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
PAX6-247ENST00000638965 POTEMA6NI47 508 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms