RNA–Protein interactions for RNA: ENST00000638824.1

NEK1-209, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 3,642 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-209ENST00000638824 KDM4FA0A1W2PPD8 638 aa4.34□□□□□ -1.72
NEK1-209ENST00000638824 CHRDL2Q6WN34 429 aa4.34□□□□□ -1.72
NEK1-209ENST00000638824 NUP155O75694 1391 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 SPHKAPQ2M3C7 1700 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 EVX2Q03828 476 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 PTPRMP28827 1452 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 TRIM52Q96A61 297 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 LMTK2Q8IWU2 1503 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 WASHC2CQ9Y4E1 1318 aa4.33□□□□□ -1.72
NEK1-209ENST00000638824 CEBPAP49715 358 aaPredicted RBP4.32□□□□□ -1.72
NEK1-209ENST00000638824 KANK1Q14678 1352 aa4.32□□□□□ -1.72
NEK1-209ENST00000638824 NPATQ14207 1427 aa4.32□□□□□ -1.72
NEK1-209ENST00000638824 MYO5BQ9ULV0 1848 aa4.32□□□□□ -1.72
NEK1-209ENST00000638824 SYNMO15061 1565 aa4.32□□□□□ -1.72
NEK1-209ENST00000638824 UGGT1Q9NYU2 1555 aa4.32□□□□□ -1.72
NEK1-209ENST00000638824 MYO3AQ8NEV4 1616 aa4.32□□□□□ -1.72
NEK1-209ENST00000638824 CNTLNQ9NXG0 1405 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 CLCN6P51797 869 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 ESF1Q9H501 851 aaKnown RBP4.31□□□□□ -1.72
NEK1-209ENST00000638824 ZMYM3Q14202 1370 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 FBXO31Q5XUX0 539 aaPredicted RBP4.31□□□□□ -1.72
NEK1-209ENST00000638824 VSIG10Q8N0Z9 540 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 ERVK-7P63135 1459 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 CLTCL1P53675 1640 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 SPATA31D1Q6ZQQ2 1576 aa4.31□□□□□ -1.72
NEK1-209ENST00000638824 ZNF142P52746 1687 aaPredicted RBP4.3□□□□□ -1.72
NEK1-209ENST00000638824 PIK3C2BO00750 1634 aa4.3□□□□□ -1.72
NEK1-209ENST00000638824 REM2Q8IYK8 340 aaPredicted RBP4.3□□□□□ -1.72
NEK1-209ENST00000638824 ARHGAP31Q2M1Z3 1444 aa4.3□□□□□ -1.72
NEK1-209ENST00000638824 PKD2Q13563 968 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 PIP4P2Q8N4L2 257 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 MPHOSPH9Q99550 1183 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 TRPM2O94759 1503 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 RPRD2Q5VT52 1461 aaKnown RBP4.29□□□□□ -1.72
NEK1-209ENST00000638824 PITPNM1O00562 1244 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 PLA2R1Q13018 1463 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 UBR1Q8IWV7 1749 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 DHX57Q6P158 1386 aaKnown RBP4.29□□□□□ -1.72
NEK1-209ENST00000638824 CEP170BQ9Y4F5 1589 aaPredicted RBP4.29□□□□□ -1.72
NEK1-209ENST00000638824 KIF1BO60333 1816 aa4.29□□□□□ -1.72
NEK1-209ENST00000638824 NOS1P29475 1434 aa4.28□□□□□ -1.72
NEK1-209ENST00000638824 SETD1BQ9UPS6 1966 aaKnown RBP4.28□□□□□ -1.72
NEK1-209ENST00000638824 TNRQ92752 1358 aa4.28□□□□□ -1.72
NEK1-209ENST00000638824 SPDYE2BA6NHP3 402 aa4.28□□□□□ -1.72
NEK1-209ENST00000638824 SPDYE6P0CI01 402 aa4.28□□□□□ -1.72
NEK1-209ENST00000638824 SPDYE2Q495Y8 402 aa4.28□□□□□ -1.72
NEK1-209ENST00000638824 TMEM131LA2VDJ0 1609 aa4.27□□□□□ -1.73
NEK1-209ENST00000638824 LMTK3Q96Q04 1460 aa4.27□□□□□ -1.73
NEK1-209ENST00000638824 PTPRTO14522 1441 aa4.27□□□□□ -1.73
NEK1-209ENST00000638824 ADGRB3O60242 1522 aa4.27□□□□□ -1.73
NEK1-209ENST00000638824 POLR1AO95602 1720 aaPredicted RBP4.27□□□□□ -1.73
NEK1-209ENST00000638824 UHRF1BP1Q6BDS2 1440 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 IFT172Q9UG01 1749 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 NLRP1Q9C000 1473 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 KDM5AP29375 1690 aaKnown RBP4.26□□□□□ -1.73
NEK1-209ENST00000638824 A2ML1A8K2U0 1454 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 ANKRD30BQ9BXX2 1392 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 CCDC144AA2RUR9 1427 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 PPLO60437 1756 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 FXR2P51116 673 aaKnown RBP eCLIP4.26□□□□□ -1.73
NEK1-209ENST00000638824 IDI1Q13907 227 aa4.26□□□□□ -1.73
NEK1-209ENST00000638824 STRCQ7RTU9 1775 aa4.25□□□□□ -1.73
NEK1-209ENST00000638824 HSPA2P54652 639 aa4.25□□□□□ -1.73
NEK1-209ENST00000638824 CHGAP10645 457 aaKnown RBP4.25□□□□□ -1.73
NEK1-209ENST00000638824 SIN3AQ96ST3 1273 aa4.25□□□□□ -1.73
NEK1-209ENST00000638824 NEXMIFQ5QGS0 1516 aa4.25□□□□□ -1.73
NEK1-209ENST00000638824 IQGAP1P46940 1657 aa4.24□□□□□ -1.73
NEK1-209ENST00000638824 NEURL4Q96JN8 1562 aa4.24□□□□□ -1.73
NEK1-209ENST00000638824 ACIN1Q9UKV3 1341 aaKnown RBP4.24□□□□□ -1.73
NEK1-209ENST00000638824 SPATA31E1Q6ZUB1 1445 aa4.24□□□□□ -1.73
NEK1-209ENST00000638824 NUTM2DQ5VT03 806 aaPredicted RBP4.24□□□□□ -1.73
NEK1-209ENST00000638824 CCER1Q8TC90 406 aaPredicted RBP4.24□□□□□ -1.73
NEK1-209ENST00000638824 NEUROD1Q13562 356 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 STAG3Q9UJ98 1225 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 SLIT1O75093 1534 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 RGL3Q3MIN7 710 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 NRXN3Q9Y4C0 1643 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 ZFYVE9O95405 1425 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 RIMS2Q9UQ26 1411 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 ARHGAP23Q9P227 1491 aa4.23□□□□□ -1.73
NEK1-209ENST00000638824 ZNF326Q5BKZ1 582 aaKnown RBP4.22□□□□□ -1.73
NEK1-209ENST00000638824 TMEM2Q9UHN6 1383 aa4.22□□□□□ -1.73
NEK1-209ENST00000638824 SETD1AO15047 1707 aaKnown RBP4.22□□□□□ -1.73
NEK1-209ENST00000638824 SCAF11Q99590 1463 aaKnown RBP4.22□□□□□ -1.73
NEK1-209ENST00000638824 TSHZ2Q9NRE2 1034 aa4.22□□□□□ -1.73
NEK1-209ENST00000638824 NCKAP5LQ9HCH0 1330 aa4.22□□□□□ -1.73
NEK1-209ENST00000638824 LTKP29376 864 aa4.21□□□□□ -1.73
NEK1-209ENST00000638824 SSUH2Q9Y2M2 353 aa4.21□□□□□ -1.73
NEK1-209ENST00000638824 IGSF3O75054 1194 aa4.21□□□□□ -1.74
NEK1-209ENST00000638824 THEMISQ8N1K5 641 aaPredicted RBP4.21□□□□□ -1.74
NEK1-209ENST00000638824 STRCP1A6NGW2 1772 aa4.21□□□□□ -1.74
NEK1-209ENST00000638824 DCAF11Q8TEB1 546 aa4.2□□□□□ -1.74
NEK1-209ENST00000638824 MYOM2P54296 1465 aa4.2□□□□□ -1.74
NEK1-209ENST00000638824 TONSLQ96HA7 1378 aa4.2□□□□□ -1.74
NEK1-209ENST00000638824 TRPM1Q7Z4N2 1603 aa4.2□□□□□ -1.74
NEK1-209ENST00000638824 ADGRF5Q8IZF2 1346 aa4.2□□□□□ -1.74
NEK1-209ENST00000638824 SETBP1Q9Y6X0 1596 aa4.2□□□□□ -1.74
NEK1-209ENST00000638824 PPP1R15AO75807 674 aaPredicted RBP4.2□□□□□ -1.74
NEK1-209ENST00000638824 TXNDC2Q86VQ3 553 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms