RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
CLN5-217ENST00000637278 C9orf84Q5VXU9 1444 aa10.56□□□□□ -0.72
CLN5-217ENST00000637278 LRRIQ1Q96JM4 1722 aa10.56□□□□□ -0.72
CLN5-217ENST00000637278 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
CLN5-217ENST00000637278 ARHGAP5Q13017 1502 aa10.55□□□□□ -0.72
CLN5-217ENST00000637278 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
CLN5-217ENST00000637278 RAPGEF3O95398 923 aa10.55□□□□□ -0.72
CLN5-217ENST00000637278 SCAPERQ9BY12 1400 aa10.55□□□□□ -0.72
CLN5-217ENST00000637278 ATP10AO60312 1499 aa10.54□□□□□ -0.72
CLN5-217ENST00000637278 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
CLN5-217ENST00000637278 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
CLN5-217ENST00000637278 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
CLN5-217ENST00000637278 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
CLN5-217ENST00000637278 ABCC1P33527 1531 aa10.53□□□□□ -0.72
CLN5-217ENST00000637278 ARHGEF12Q9NZN5 1544 aa10.53□□□□□ -0.72
CLN5-217ENST00000637278 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
CLN5-217ENST00000637278 KCNG1Q9UIX4 513 aa10.52□□□□□ -0.73
CLN5-217ENST00000637278 CCDC27Q2M243 656 aa10.51□□□□□ -0.73
CLN5-217ENST00000637278 WWC1Q8IX03 1113 aa10.51□□□□□ -0.73
CLN5-217ENST00000637278 IPO4Q8TEX9 1081 aaKnown RBP10.51□□□□□ -0.73
CLN5-217ENST00000637278 PSMD1Q99460 953 aa10.51□□□□□ -0.73
CLN5-217ENST00000637278 MLH3Q9UHC1 1453 aa10.51□□□□□ -0.73
CLN5-217ENST00000637278 AGLP35573 1532 aa10.5□□□□□ -0.73
CLN5-217ENST00000637278 PLEKHH2Q8IVE3 1493 aa10.5□□□□□ -0.73
CLN5-217ENST00000637278 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
CLN5-217ENST00000637278 TEX2Q8IWB9 1127 aa10.5□□□□□ -0.73
CLN5-217ENST00000637278 CDC42BPAQ5VT25 1732 aa10.5□□□□□ -0.73
CLN5-217ENST00000637278 YEATS2Q9ULM3 1422 aa10.5□□□□□ -0.73
CLN5-217ENST00000637278 PREX1Q8TCU6 1659 aa10.5□□□□□ -0.73
CLN5-217ENST00000637278 DIP2CQ9Y2E4 1556 aa10.49□□□□□ -0.73
CLN5-217ENST00000637278 PPP1R1BQ9UD71 204 aaPredicted RBP10.49□□□□□ -0.73
CLN5-217ENST00000637278 LMTK3Q96Q04 1460 aa10.48□□□□□ -0.73
CLN5-217ENST00000637278 BRD1O95696 1058 aa10.48□□□□□ -0.73
CLN5-217ENST00000637278 SIGLEC1Q9BZZ2 1709 aa10.48□□□□□ -0.73
CLN5-217ENST00000637278 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
CLN5-217ENST00000637278 ABCA6Q8N139 1617 aa10.47□□□□□ -0.73
CLN5-217ENST00000637278 EHBP1L1Q8N3D4 1523 aa10.46□□□□□ -0.73
CLN5-217ENST00000637278 PDE4DQ08499 809 aa10.46□□□□□ -0.74
CLN5-217ENST00000637278 ZNF662Q6ZS27 426 aa10.46□□□□□ -0.74
CLN5-217ENST00000637278 MROH2AA6NES4 1674 aa10.45□□□□□ -0.74
CLN5-217ENST00000637278 CNTLNQ9NXG0 1405 aa10.45□□□□□ -0.74
CLN5-217ENST00000637278 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
CLN5-217ENST00000637278 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
CLN5-217ENST00000637278 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
CLN5-217ENST00000637278 FAM43BQ6ZT52 329 aaPredicted RBP10.44□□□□□ -0.74
CLN5-217ENST00000637278 SAMD9LQ8IVG5 1584 aa10.43□□□□□ -0.74
CLN5-217ENST00000637278 FTSJ3Q8IY81 847 aaKnown RBP10.43□□□□□ -0.74
CLN5-217ENST00000637278 MIER1Q8N108 512 aa10.43□□□□□ -0.74
CLN5-217ENST00000637278 KIDINS220Q9ULH0 1771 aa10.43□□□□□ -0.74
CLN5-217ENST00000637278 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
CLN5-217ENST00000637278 FOSBP53539 338 aa10.43□□□□□ -0.74
CLN5-217ENST00000637278 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
CLN5-217ENST00000637278 CCDC125Q86Z20 511 aa10.42□□□□□ -0.74
CLN5-217ENST00000637278 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
CLN5-217ENST00000637278 ADGBQ8N7X0 1667 aa10.42□□□□□ -0.74
CLN5-217ENST00000637278 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
CLN5-217ENST00000637278 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
CLN5-217ENST00000637278 GPATCH8Q9UKJ3 1502 aaKnown RBP10.41□□□□□ -0.74
CLN5-217ENST00000637278 ATP7AQ04656 1500 aa10.4□□□□□ -0.74
CLN5-217ENST00000637278 SYCP2Q9BX26 1530 aa10.4□□□□□ -0.74
CLN5-217ENST00000637278 CLSTN1O94985 981 aa10.4□□□□□ -0.74
CLN5-217ENST00000637278 C3P01024 1663 aa10.4□□□□□ -0.75
CLN5-217ENST00000637278 PLXNC1O60486 1568 aa10.4□□□□□ -0.75
CLN5-217ENST00000637278 CCNB3Q8WWL7 1395 aa10.4□□□□□ -0.75
CLN5-217ENST00000637278 TRIM66O15016 1216 aa10.4□□□□□ -0.75
CLN5-217ENST00000637278 ILDR1Q86SU0 546 aaPredicted RBP10.4□□□□□ -0.75
CLN5-217ENST00000637278 KIAA1522Q9P206 1035 aaPredicted RBP10.4□□□□□ -0.75
CLN5-217ENST00000637278 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
CLN5-217ENST00000637278 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
CLN5-217ENST00000637278 TRAPPC8Q9Y2L5 1435 aa10.39□□□□□ -0.75
CLN5-217ENST00000637278 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
CLN5-217ENST00000637278 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
CLN5-217ENST00000637278 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
CLN5-217ENST00000637278 TIAM1Q13009 1591 aa10.38□□□□□ -0.75
CLN5-217ENST00000637278 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
CLN5-217ENST00000637278 NPATQ14207 1427 aa10.38□□□□□ -0.75
CLN5-217ENST00000637278 SETD1BQ9UPS6 1966 aaKnown RBP10.38□□□□□ -0.75
CLN5-217ENST00000637278 FBXO41Q8TF61 875 aa10.38□□□□□ -0.75
CLN5-217ENST00000637278 STK24Q9Y6E0 443 aa10.38□□□□□ -0.75
CLN5-217ENST00000637278 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
CLN5-217ENST00000637278 MCM6Q14566 821 aa10.36□□□□□ -0.75
CLN5-217ENST00000637278 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
CLN5-217ENST00000637278 DMRT2Q9Y5R5 561 aa10.36□□□□□ -0.75
CLN5-217ENST00000637278 AFAP1Q8N556 730 aa10.36□□□□□ -0.75
CLN5-217ENST00000637278 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
CLN5-217ENST00000637278 ZNF142P52746 1687 aaPredicted RBP10.35□□□□□ -0.75
CLN5-217ENST00000637278 SPAG9O60271 1321 aaKnown RBP10.35□□□□□ -0.75
CLN5-217ENST00000637278 MAP3K1Q13233 1512 aa10.35□□□□□ -0.75
CLN5-217ENST00000637278 AK7Q96M32 723 aa10.35□□□□□ -0.75
CLN5-217ENST00000637278 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
CLN5-217ENST00000637278 A2MP01023 1474 aa10.35□□□□□ -0.75
CLN5-217ENST00000637278 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
CLN5-217ENST00000637278 MLLT3P42568 568 aaPredicted RBP10.34□□□□□ -0.75
CLN5-217ENST00000637278 MLECQ14165 292 aa10.34□□□□□ -0.75
CLN5-217ENST00000637278 CFDP1Q9UEE9 299 aaPredicted RBP10.34□□□□□ -0.75
CLN5-217ENST00000637278 PTPRTO14522 1441 aa10.34□□□□□ -0.75
CLN5-217ENST00000637278 ARHGEF5Q12774 1597 aa10.34□□□□□ -0.75
CLN5-217ENST00000637278 HOXD11P31277 338 aaPredicted RBP10.33□□□□□ -0.76
CLN5-217ENST00000637278 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
CLN5-217ENST00000637278 STAC3Q96MF2 364 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms