RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
LINC01560-202ENST00000624822 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
LINC01560-202ENST00000624822 STRCQ7RTU9 1775 aa14.24□□□□□ -0.13
LINC01560-202ENST00000624822 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
LINC01560-202ENST00000624822 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
LINC01560-202ENST00000624822 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
LINC01560-202ENST00000624822 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
LINC01560-202ENST00000624822 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
LINC01560-202ENST00000624822 NOS1P29475 1434 aa14.21□□□□□ -0.13
LINC01560-202ENST00000624822 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
LINC01560-202ENST00000624822 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
LINC01560-202ENST00000624822 KIF1BO60333 1816 aa14.19□□□□□ -0.14
LINC01560-202ENST00000624822 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
LINC01560-202ENST00000624822 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
LINC01560-202ENST00000624822 PKD2Q13563 968 aa14.17□□□□□ -0.14
LINC01560-202ENST00000624822 THEMISQ8N1K5 641 aaPredicted RBP14.17□□□□□ -0.14
LINC01560-202ENST00000624822 PLA2R1Q13018 1463 aa14.17□□□□□ -0.14
LINC01560-202ENST00000624822 CHGAP10645 457 aaKnown RBP14.16□□□□□ -0.14
LINC01560-202ENST00000624822 TRIM26Q12899 539 aaPredicted RBP14.16□□□□□ -0.14
LINC01560-202ENST00000624822 IDI1Q13907 227 aa14.16□□□□□ -0.14
LINC01560-202ENST00000624822 SLC52A1Q9NWF4 448 aa14.16□□□□□ -0.14
LINC01560-202ENST00000624822 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
LINC01560-202ENST00000624822 TRPM2O94759 1503 aa14.15□□□□□ -0.14
LINC01560-202ENST00000624822 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.15
LINC01560-202ENST00000624822 MPHOSPH9Q99550 1183 aa14.14□□□□□ -0.15
LINC01560-202ENST00000624822 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
LINC01560-202ENST00000624822 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
LINC01560-202ENST00000624822 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
LINC01560-202ENST00000624822 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
LINC01560-202ENST00000624822 IQGAP1P46940 1657 aa14.12□□□□□ -0.15
LINC01560-202ENST00000624822 ANKLE2Q86XL3 938 aa14.12□□□□□ -0.15
LINC01560-202ENST00000624822 PTPRTO14522 1441 aa14.12□□□□□ -0.15
LINC01560-202ENST00000624822 NEURL4Q96JN8 1562 aa14.11□□□□□ -0.15
LINC01560-202ENST00000624822 SLIT1O75093 1534 aa14.1□□□□□ -0.15
LINC01560-202ENST00000624822 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC01560-202ENST00000624822 EID1Q9Y6B2 187 aa14.09□□□□□ -0.15
LINC01560-202ENST00000624822 SCAF11Q99590 1463 aaKnown RBP14.08□□□□□ -0.16
LINC01560-202ENST00000624822 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
LINC01560-202ENST00000624822 HRCP23327 699 aa14.08□□□□□ -0.16
LINC01560-202ENST00000624822 TMEM2Q9UHN6 1383 aa14.08□□□□□ -0.16
LINC01560-202ENST00000624822 CCDC144AA2RUR9 1427 aa14.07□□□□□ -0.16
LINC01560-202ENST00000624822 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
LINC01560-202ENST00000624822 TXNDC2Q86VQ3 553 aa14.07□□□□□ -0.16
LINC01560-202ENST00000624822 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
LINC01560-202ENST00000624822 RIMS2Q9UQ26 1411 aa14.06□□□□□ -0.16
LINC01560-202ENST00000624822 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
LINC01560-202ENST00000624822 BCANQ96GW7 911 aa14.05□□□□□ -0.16
LINC01560-202ENST00000624822 MED14O60244 1454 aa14.05□□□□□ -0.16
LINC01560-202ENST00000624822 LTKP29376 864 aa14.04□□□□□ -0.16
LINC01560-202ENST00000624822 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
LINC01560-202ENST00000624822 PPLO60437 1756 aa14.04□□□□□ -0.16
LINC01560-202ENST00000624822 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
LINC01560-202ENST00000624822 ZFYVE9O95405 1425 aa14.02□□□□□ -0.16
LINC01560-202ENST00000624822 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.17
LINC01560-202ENST00000624822 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC01560-202ENST00000624822 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
LINC01560-202ENST00000624822 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
LINC01560-202ENST00000624822 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
LINC01560-202ENST00000624822 PCGF6Q9BYE7 350 aa14□□□□□ -0.17
LINC01560-202ENST00000624822 ZNF335Q9H4Z2 1342 aaPredicted RBP13.98□□□□□ -0.17
LINC01560-202ENST00000624822 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
LINC01560-202ENST00000624822 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
LINC01560-202ENST00000624822 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
LINC01560-202ENST00000624822 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
LINC01560-202ENST00000624822 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.17
LINC01560-202ENST00000624822 HAX1O00165 279 aa13.96□□□□□ -0.17
LINC01560-202ENST00000624822 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
LINC01560-202ENST00000624822 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
LINC01560-202ENST00000624822 LTBP4Q8N2S1 1624 aa13.96□□□□□ -0.17
LINC01560-202ENST00000624822 CHD2O14647 1828 aaKnown RBP13.95□□□□□ -0.18
LINC01560-202ENST00000624822 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
LINC01560-202ENST00000624822 DIP2AQ14689 1571 aa13.95□□□□□ -0.18
LINC01560-202ENST00000624822 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
LINC01560-202ENST00000624822 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
LINC01560-202ENST00000624822 SETBP1Q9Y6X0 1596 aa13.93□□□□□ -0.18
LINC01560-202ENST00000624822 CPS1P31327 1500 aa13.93□□□□□ -0.18
LINC01560-202ENST00000624822 DHX57Q6P158 1386 aaKnown RBP13.93□□□□□ -0.18
LINC01560-202ENST00000624822 VGFO15240 615 aaPredicted RBP13.92□□□□□ -0.18
LINC01560-202ENST00000624822 CERKQ8TCT0 537 aa13.91□□□□□ -0.18
LINC01560-202ENST00000624822 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.18
LINC01560-202ENST00000624822 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
LINC01560-202ENST00000624822 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
LINC01560-202ENST00000624822 NWD1Q149M9 1564 aa13.89□□□□□ -0.19
LINC01560-202ENST00000624822 XIRP1Q702N8 1843 aaKnown RBP13.89□□□□□ -0.19
LINC01560-202ENST00000624822 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
LINC01560-202ENST00000624822 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
LINC01560-202ENST00000624822 EVX2Q03828 476 aa13.87□□□□□ -0.19
LINC01560-202ENST00000624822 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
LINC01560-202ENST00000624822 MYOM2P54296 1465 aa13.87□□□□□ -0.19
LINC01560-202ENST00000624822 LAMC1P11047 1609 aa13.86□□□□□ -0.19
LINC01560-202ENST00000624822 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
LINC01560-202ENST00000624822 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
LINC01560-202ENST00000624822 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
LINC01560-202ENST00000624822 NKTRP30414 1462 aaKnown RBP13.86□□□□□ -0.19
LINC01560-202ENST00000624822 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
LINC01560-202ENST00000624822 KCNA6P17658 529 aa13.85□□□□□ -0.19
LINC01560-202ENST00000624822 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
LINC01560-202ENST00000624822 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
LINC01560-202ENST00000624822 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
LINC01560-202ENST00000624822 PIK3R4Q99570 1358 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms