RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
USB1-216ENST00000624720 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
USB1-216ENST00000624720 E9PSI1 815 aa11.9□□□□□ -0.5
USB1-216ENST00000624720 RGL3Q3MIN7 710 aa11.9□□□□□ -0.5
USB1-216ENST00000624720 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
USB1-216ENST00000624720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.89□□□□□ -0.51
USB1-216ENST00000624720 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
USB1-216ENST00000624720 TNNT2P45379 298 aaPredicted RBP11.89□□□□□ -0.51
USB1-216ENST00000624720 NUP155O75694 1391 aa11.89□□□□□ -0.51
USB1-216ENST00000624720 L3MBTL2Q969R5 705 aa11.88□□□□□ -0.51
USB1-216ENST00000624720 ABCC2Q92887 1545 aa11.88□□□□□ -0.51
USB1-216ENST00000624720 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
USB1-216ENST00000624720 TPM2P07951 284 aa11.88□□□□□ -0.51
USB1-216ENST00000624720 CLCN1P35523 988 aa11.88□□□□□ -0.51
USB1-216ENST00000624720 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
USB1-216ENST00000624720 SETQ01105 290 aaPredicted RBP11.87□□□□□ -0.51
USB1-216ENST00000624720 EFCAB2Q5VUJ9 269 aa11.87□□□□□ -0.51
USB1-216ENST00000624720 PPP1R15AO75807 674 aaPredicted RBP11.87□□□□□ -0.51
USB1-216ENST00000624720 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
USB1-216ENST00000624720 TCOF1Q13428 1488 aaKnown RBP11.86□□□□□ -0.51
USB1-216ENST00000624720 ANKRD30AQ9BXX3 1397 aa11.86□□□□□ -0.51
USB1-216ENST00000624720 KIF15Q9NS87 1388 aa11.86□□□□□ -0.51
USB1-216ENST00000624720 ABCC10Q5T3U5 1492 aa11.86□□□□□ -0.51
USB1-216ENST00000624720 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
USB1-216ENST00000624720 NCOA1Q15788 1441 aa11.85□□□□□ -0.51
USB1-216ENST00000624720 GLI2P10070 1586 aa11.85□□□□□ -0.51
USB1-216ENST00000624720 CC2D1BQ5T0F9 858 aaKnown RBP11.85□□□□□ -0.51
USB1-216ENST00000624720 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
USB1-216ENST00000624720 KDM5BQ9UGL1 1544 aa11.85□□□□□ -0.51
USB1-216ENST00000624720 ANAPC15P60006 121 aa11.85□□□□□ -0.51
USB1-216ENST00000624720 DMTNQ08495 405 aa11.85□□□□□ -0.51
USB1-216ENST00000624720 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
USB1-216ENST00000624720 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
USB1-216ENST00000624720 GPATCH11Q8N954 259 aa11.84□□□□□ -0.51
USB1-216ENST00000624720 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
USB1-216ENST00000624720 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
USB1-216ENST00000624720 AKNAQ7Z591 1439 aa11.83□□□□□ -0.52
USB1-216ENST00000624720 RAPGEF3O95398 923 aa11.82□□□□□ -0.52
USB1-216ENST00000624720 SYCP2Q9BX26 1530 aa11.82□□□□□ -0.52
USB1-216ENST00000624720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.52
USB1-216ENST00000624720 KIF20AO95235 890 aa11.81□□□□□ -0.52
USB1-216ENST00000624720 NGEFQ8N5V2 710 aa11.81□□□□□ -0.52
USB1-216ENST00000624720 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
USB1-216ENST00000624720 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
USB1-216ENST00000624720 TRAPPC8Q9Y2L5 1435 aa11.8□□□□□ -0.52
USB1-216ENST00000624720 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
USB1-216ENST00000624720 DENND4BO75064 1496 aaPredicted RBP11.8□□□□□ -0.52
USB1-216ENST00000624720 NBPF8Q3BBV2 869 aa11.8□□□□□ -0.52
USB1-216ENST00000624720 TAF3Q5VWG9 929 aa11.8□□□□□ -0.52
USB1-216ENST00000624720 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
USB1-216ENST00000624720 ZCCHC11Q5TAX3 1644 aaKnown RBP11.8□□□□□ -0.52
USB1-216ENST00000624720 KIF3BO15066 747 aa11.79□□□□□ -0.52
USB1-216ENST00000624720 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
USB1-216ENST00000624720 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
USB1-216ENST00000624720 GGT6Q6P531 493 aa11.78□□□□□ -0.52
USB1-216ENST00000624720 AEBP1Q8IUX7 1158 aa11.78□□□□□ -0.52
USB1-216ENST00000624720 DNMT1P26358 1616 aaKnown RBP11.78□□□□□ -0.52
USB1-216ENST00000624720 CDC42BPAQ5VT25 1732 aa11.78□□□□□ -0.52
USB1-216ENST00000624720 SCAPERQ9BY12 1400 aa11.78□□□□□ -0.52
USB1-216ENST00000624720 ARHGEF12Q9NZN5 1544 aa11.78□□□□□ -0.52
USB1-216ENST00000624720 EGFL6Q8IUX8 553 aa11.77□□□□□ -0.52
USB1-216ENST00000624720 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
USB1-216ENST00000624720 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
USB1-216ENST00000624720 HSPA5P11021 654 aaKnown RBP11.76□□□□□ -0.53
USB1-216ENST00000624720 ROCK1Q13464 1354 aa11.76□□□□□ -0.53
USB1-216ENST00000624720 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
USB1-216ENST00000624720 PLEKHH2Q8IVE3 1493 aa11.76□□□□□ -0.53
USB1-216ENST00000624720 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
USB1-216ENST00000624720 RALBP1Q15311 655 aa11.76□□□□□ -0.53
USB1-216ENST00000624720 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
USB1-216ENST00000624720 SH3BP1Q9Y3L3 701 aa11.75□□□□□ -0.53
USB1-216ENST00000624720 MAP3K4Q9Y6R4 1608 aa11.75□□□□□ -0.53
USB1-216ENST00000624720 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
USB1-216ENST00000624720 WDR7Q9Y4E6 1490 aa11.75□□□□□ -0.53
USB1-216ENST00000624720 PLCH2O75038 1416 aa11.74□□□□□ -0.53
USB1-216ENST00000624720 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
USB1-216ENST00000624720 ANKRD30BQ9BXX2 1392 aa11.74□□□□□ -0.53
USB1-216ENST00000624720 MLECQ14165 292 aa11.73□□□□□ -0.53
USB1-216ENST00000624720 ITSN2Q9NZM3 1697 aa11.73□□□□□ -0.53
USB1-216ENST00000624720 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
USB1-216ENST00000624720 FANCAO15360 1455 aa11.72□□□□□ -0.53
USB1-216ENST00000624720 PZPP20742 1482 aa11.72□□□□□ -0.53
USB1-216ENST00000624720 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
USB1-216ENST00000624720 MAFGO15525 162 aa11.72□□□□□ -0.53
USB1-216ENST00000624720 SLC20A2Q08357 652 aa11.72□□□□□ -0.53
USB1-216ENST00000624720 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
USB1-216ENST00000624720 LETM1O95202 739 aaPredicted RBP11.71□□□□□ -0.53
USB1-216ENST00000624720 NUTM2DQ5VT03 806 aaPredicted RBP11.71□□□□□ -0.53
USB1-216ENST00000624720 CEP120Q8N960 986 aa11.71□□□□□ -0.53
USB1-216ENST00000624720 PPP4R2Q9NY27 417 aa11.71□□□□□ -0.53
USB1-216ENST00000624720 ZBTB22O15209 634 aa11.71□□□□□ -0.54
USB1-216ENST00000624720 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.54
USB1-216ENST00000624720 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.54
USB1-216ENST00000624720 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
USB1-216ENST00000624720 MPNDQ8N594 471 aa11.7□□□□□ -0.54
USB1-216ENST00000624720 CD109Q6YHK3 1445 aa11.7□□□□□ -0.54
USB1-216ENST00000624720 ADRA2BP18089 450 aa11.7□□□□□ -0.54
USB1-216ENST00000624720 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
USB1-216ENST00000624720 GTPBP4Q9BZE4 634 aaKnown RBP11.69□□□□□ -0.54
USB1-216ENST00000624720 GEMIN8Q9NWZ8 242 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms