RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
CBWD3-215ENST00000619322 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
CBWD3-215ENST00000619322 FGD6Q6ZV73 1430 aa9.15□□□□□ -0.94
CBWD3-215ENST00000619322 PRR29P0C7W0 189 aa9.15□□□□□ -0.94
CBWD3-215ENST00000619322 MNX1P50219 401 aaPredicted RBP9.15□□□□□ -0.94
CBWD3-215ENST00000619322 NRXN3Q9Y4C0 1643 aa9.15□□□□□ -0.94
CBWD3-215ENST00000619322 PLEKHD1A6NEE1 506 aa9.14□□□□□ -0.95
CBWD3-215ENST00000619322 E9PCH4 1651 aa9.14□□□□□ -0.95
CBWD3-215ENST00000619322 DCCP43146 1447 aa9.14□□□□□ -0.95
CBWD3-215ENST00000619322 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
CBWD3-215ENST00000619322 PKD2Q13563 968 aa9.13□□□□□ -0.95
CBWD3-215ENST00000619322 MIER1Q8N108 512 aa9.13□□□□□ -0.95
CBWD3-215ENST00000619322 KIAA1210Q9ULL0 1709 aa9.13□□□□□ -0.95
CBWD3-215ENST00000619322 PIK3R4Q99570 1358 aa9.12□□□□□ -0.95
CBWD3-215ENST00000619322 PPLO60437 1756 aa9.12□□□□□ -0.95
CBWD3-215ENST00000619322 CDK12Q9NYV4 1490 aaPredicted RBP9.12□□□□□ -0.95
CBWD3-215ENST00000619322 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
CBWD3-215ENST00000619322 RGPD3A6NKT7 1758 aaPredicted RBP9.11□□□□□ -0.95
CBWD3-215ENST00000619322 RGPD4Q7Z3J3 1758 aa9.11□□□□□ -0.95
CBWD3-215ENST00000619322 ADGRB2O60241 1585 aa9.11□□□□□ -0.95
CBWD3-215ENST00000619322 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
CBWD3-215ENST00000619322 TRPM2O94759 1503 aa9.1□□□□□ -0.95
CBWD3-215ENST00000619322 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
CBWD3-215ENST00000619322 MED1Q15648 1581 aaPredicted RBP9.09□□□□□ -0.95
CBWD3-215ENST00000619322 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
CBWD3-215ENST00000619322 KIF1AQ12756 1690 aa9.09□□□□□ -0.95
CBWD3-215ENST00000619322 ZFYVE9O95405 1425 aa9.08□□□□□ -0.96
CBWD3-215ENST00000619322 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
CBWD3-215ENST00000619322 NALCNQ8IZF0 1738 aa9.08□□□□□ -0.96
CBWD3-215ENST00000619322 KIF1BO60333 1816 aa9.07□□□□□ -0.96
CBWD3-215ENST00000619322 EVX2Q03828 476 aa9.07□□□□□ -0.96
CBWD3-215ENST00000619322 MYO5BQ9ULV0 1848 aa9.07□□□□□ -0.96
CBWD3-215ENST00000619322 COL16A1Q07092 1604 aaPredicted RBP9.07□□□□□ -0.96
CBWD3-215ENST00000619322 FBXO3Q9UK99 471 aa9.06□□□□□ -0.96
CBWD3-215ENST00000619322 MST1RQ04912 1400 aa9.04□□□□□ -0.96
CBWD3-215ENST00000619322 ABCA3Q99758 1704 aa9.03□□□□□ -0.96
CBWD3-215ENST00000619322 DAPK1P53355 1430 aa9.03□□□□□ -0.96
CBWD3-215ENST00000619322 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
CBWD3-215ENST00000619322 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
CBWD3-215ENST00000619322 LRRC7Q96NW7 1537 aa9.02□□□□□ -0.97
CBWD3-215ENST00000619322 NWD2Q9ULI1 1742 aa9.02□□□□□ -0.97
CBWD3-215ENST00000619322 CDC42BPGQ6DT37 1551 aa9.02□□□□□ -0.97
CBWD3-215ENST00000619322 SCAF11Q99590 1463 aaKnown RBP9.02□□□□□ -0.97
CBWD3-215ENST00000619322 NRXN1Q9ULB1 1477 aa9.01□□□□□ -0.97
CBWD3-215ENST00000619322 ZMYM3Q14202 1370 aa9.01□□□□□ -0.97
CBWD3-215ENST00000619322 COL24A1Q17RW2 1714 aa9□□□□□ -0.97
CBWD3-215ENST00000619322 CCNB3Q8WWL7 1395 aa9□□□□□ -0.97
CBWD3-215ENST00000619322 KLHL34Q8N239 644 aa9□□□□□ -0.97
CBWD3-215ENST00000619322 DLC1Q96QB1 1528 aa9□□□□□ -0.97
CBWD3-215ENST00000619322 FAM135BQ49AJ0 1406 aa8.99□□□□□ -0.97
CBWD3-215ENST00000619322 STAG3Q9UJ98 1225 aa8.99□□□□□ -0.97
CBWD3-215ENST00000619322 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
CBWD3-215ENST00000619322 ABCC6O95255 1503 aa8.99□□□□□ -0.97
CBWD3-215ENST00000619322 NEXMIFQ5QGS0 1516 aa8.99□□□□□ -0.97
CBWD3-215ENST00000619322 ABCC5O15440 1437 aa8.99□□□□□ -0.97
CBWD3-215ENST00000619322 RRBP1Q9P2E9 1410 aaKnown RBP8.98□□□□□ -0.97
CBWD3-215ENST00000619322 TOPAZ1Q8N9V7 1692 aa8.98□□□□□ -0.97
CBWD3-215ENST00000619322 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
CBWD3-215ENST00000619322 NPHP4O75161 1426 aaPredicted RBP8.98□□□□□ -0.97
CBWD3-215ENST00000619322 FMN2Q9NZ56 1722 aa8.97□□□□□ -0.97
CBWD3-215ENST00000619322 TNRQ92752 1358 aa8.97□□□□□ -0.97
CBWD3-215ENST00000619322 PTCH1Q13635 1447 aa8.97□□□□□ -0.97
CBWD3-215ENST00000619322 LRP5O75197 1615 aa8.97□□□□□ -0.97
CBWD3-215ENST00000619322 TECPR2O15040 1411 aa8.97□□□□□ -0.97
CBWD3-215ENST00000619322 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.96□□□□□ -0.97
CBWD3-215ENST00000619322 ITSN1Q15811 1721 aa8.95□□□□□ -0.98
CBWD3-215ENST00000619322 NUBP1P53384 320 aa8.95□□□□□ -0.98
CBWD3-215ENST00000619322 PLEKHG1Q9ULL1 1385 aa8.95□□□□□ -0.98
CBWD3-215ENST00000619322 PHLPP1O60346 1717 aa8.95□□□□□ -0.98
CBWD3-215ENST00000619322 ROBO1Q9Y6N7 1651 aa8.95□□□□□ -0.98
CBWD3-215ENST00000619322 MTUS2Q5JR59 1369 aa8.94□□□□□ -0.98
CBWD3-215ENST00000619322 QSER1Q2KHR3 1735 aa8.94□□□□□ -0.98
CBWD3-215ENST00000619322 MYOM2P54296 1465 aa8.94□□□□□ -0.98
CBWD3-215ENST00000619322 PLCH1Q4KWH8 1693 aa8.93□□□□□ -0.98
CBWD3-215ENST00000619322 CERKQ8TCT0 537 aa8.93□□□□□ -0.98
CBWD3-215ENST00000619322 POTEHQ6S545 545 aa8.93□□□□□ -0.98
CBWD3-215ENST00000619322 TSPYL2Q9H2G4 693 aaPredicted RBP8.93□□□□□ -0.98
CBWD3-215ENST00000619322 TRPM1Q7Z4N2 1603 aa8.92□□□□□ -0.98
CBWD3-215ENST00000619322 CLTCL1P53675 1640 aa8.92□□□□□ -0.98
CBWD3-215ENST00000619322 NRAPQ86VF7 1730 aa8.91□□□□□ -0.98
CBWD3-215ENST00000619322 TRPM3Q9HCF6 1732 aaPredicted RBP8.91□□□□□ -0.98
CBWD3-215ENST00000619322 PHRF1Q9P1Y6 1649 aaKnown RBP8.9□□□□□ -0.98
CBWD3-215ENST00000619322 SPAG9O60271 1321 aaKnown RBP8.9□□□□□ -0.99
CBWD3-215ENST00000619322 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
CBWD3-215ENST00000619322 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
CBWD3-215ENST00000619322 RAPGEF3O95398 923 aa8.87□□□□□ -0.99
CBWD3-215ENST00000619322 PYGBP11216 843 aa8.86□□□□□ -0.99
CBWD3-215ENST00000619322 CIZ1Q9ULV3 898 aaPredicted RBP8.86□□□□□ -0.99
CBWD3-215ENST00000619322 ILDR1Q86SU0 546 aaPredicted RBP8.86□□□□□ -0.99
CBWD3-215ENST00000619322 TMEM2Q9UHN6 1383 aa8.85□□□□□ -0.99
CBWD3-215ENST00000619322 SETD5Q9C0A6 1442 aa8.85□□□□□ -0.99
CBWD3-215ENST00000619322 PHF12Q96QT6 1004 aa8.85□□□□□ -0.99
CBWD3-215ENST00000619322 ANKRD30AQ9BXX3 1397 aa8.84□□□□□ -0.99
CBWD3-215ENST00000619322 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
CBWD3-215ENST00000619322 RREB1Q92766 1687 aa8.84□□□□□ -0.99
CBWD3-215ENST00000619322 QRICH2Q9H0J4 1663 aa8.84□□□□□ -1
CBWD3-215ENST00000619322 HAX1O00165 279 aa8.83□□□□□ -1
CBWD3-215ENST00000619322 RGL2O15211 777 aa8.83□□□□□ -1
CBWD3-215ENST00000619322 TRPC6Q9Y210 931 aa8.83□□□□□ -1
CBWD3-215ENST00000619322 ADAMTS13Q76LX8 1427 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms