RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 IFNLR1Q8IU57 520 aaPredicted RBP16.69■□□□□ 0.26
UCHL3-206ENST00000618773 FAM163AQ96GL9 167 aaPredicted RBP16.69■□□□□ 0.26
UCHL3-206ENST00000618773 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
UCHL3-206ENST00000618773 CAMSAP1Q5T5Y3 1602 aa16.68■□□□□ 0.26
UCHL3-206ENST00000618773 POTEGQ6S5H5 508 aa16.68■□□□□ 0.26
UCHL3-206ENST00000618773 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
UCHL3-206ENST00000618773 NPATQ14207 1427 aa16.68■□□□□ 0.26
UCHL3-206ENST00000618773 NCOA1Q15788 1441 aa16.68■□□□□ 0.26
UCHL3-206ENST00000618773 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
UCHL3-206ENST00000618773 CHRM1P11229 460 aaPredicted RBP16.67■□□□□ 0.26
UCHL3-206ENST00000618773 CEP170BQ9Y4F5 1589 aaPredicted RBP16.66■□□□□ 0.26
UCHL3-206ENST00000618773 LTBP4Q8N2S1 1624 aa16.66■□□□□ 0.26
UCHL3-206ENST00000618773 PTPRTO14522 1441 aa16.65■□□□□ 0.26
UCHL3-206ENST00000618773 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
UCHL3-206ENST00000618773 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
UCHL3-206ENST00000618773 ZMYM3Q14202 1370 aa16.64■□□□□ 0.26
UCHL3-206ENST00000618773 PTPRKQ15262 1439 aa16.63■□□□□ 0.25
UCHL3-206ENST00000618773 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
UCHL3-206ENST00000618773 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
UCHL3-206ENST00000618773 OCEL1Q9H607 264 aa16.63■□□□□ 0.25
UCHL3-206ENST00000618773 PLSCR2Q9NRY7 297 aa16.63■□□□□ 0.25
UCHL3-206ENST00000618773 ARHGEF5Q12774 1597 aa16.63■□□□□ 0.25
UCHL3-206ENST00000618773 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
UCHL3-206ENST00000618773 GOLGA2Q08379 1002 aa16.61■□□□□ 0.25
UCHL3-206ENST00000618773 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
UCHL3-206ENST00000618773 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
UCHL3-206ENST00000618773 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
UCHL3-206ENST00000618773 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
UCHL3-206ENST00000618773 KDM5DQ9BY66 1539 aa16.58■□□□□ 0.24
UCHL3-206ENST00000618773 RNF17Q9BXT8 1623 aaKnown RBP16.57■□□□□ 0.24
UCHL3-206ENST00000618773 MAST1Q9Y2H9 1570 aa16.57■□□□□ 0.24
UCHL3-206ENST00000618773 GGT6Q6P531 493 aa16.57■□□□□ 0.24
UCHL3-206ENST00000618773 SLAIN1Q8ND83 568 aa16.57■□□□□ 0.24
UCHL3-206ENST00000618773 PLA2R1Q13018 1463 aa16.56■□□□□ 0.24
UCHL3-206ENST00000618773 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
UCHL3-206ENST00000618773 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
UCHL3-206ENST00000618773 FAM135AQ9P2D6 1515 aa16.55■□□□□ 0.24
UCHL3-206ENST00000618773 PSEN1P49768 467 aa16.55■□□□□ 0.24
UCHL3-206ENST00000618773 MKRN3Q13064 507 aaKnown RBP16.55■□□□□ 0.24
UCHL3-206ENST00000618773 CROCC2H7BZ55 1655 aa16.55■□□□□ 0.24
UCHL3-206ENST00000618773 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
UCHL3-206ENST00000618773 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
UCHL3-206ENST00000618773 MROH1Q8NDA8 1641 aa16.54■□□□□ 0.24
UCHL3-206ENST00000618773 CEP152O94986 1710 aa16.53■□□□□ 0.24
UCHL3-206ENST00000618773 A2ML1A8K2U0 1454 aa16.53■□□□□ 0.24
UCHL3-206ENST00000618773 EIF2AK4Q9P2K8 1649 aaKnown RBP16.52■□□□□ 0.24
UCHL3-206ENST00000618773 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.24
UCHL3-206ENST00000618773 MAP3K1Q13233 1512 aa16.52■□□□□ 0.24
UCHL3-206ENST00000618773 PZPP20742 1482 aa16.52■□□□□ 0.23
UCHL3-206ENST00000618773 ZC3H13Q5T200 1668 aaKnown RBP16.52■□□□□ 0.23
UCHL3-206ENST00000618773 IQSEC2Q5JU85 1478 aa16.51■□□□□ 0.23
UCHL3-206ENST00000618773 LCE2DQ5TA82 110 aaPredicted RBP16.5■□□□□ 0.23
UCHL3-206ENST00000618773 KIF3BO15066 747 aa16.48■□□□□ 0.23
UCHL3-206ENST00000618773 PDAP1Q13442 181 aaKnown RBP16.48■□□□□ 0.23
UCHL3-206ENST00000618773 KANK4Q5T7N3 995 aaPredicted RBP16.48■□□□□ 0.23
UCHL3-206ENST00000618773 CFAP65Q6ZU64 1925 aaKnown RBP16.48■□□□□ 0.23
UCHL3-206ENST00000618773 ABCC3O15438 1527 aa16.48■□□□□ 0.23
UCHL3-206ENST00000618773 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
UCHL3-206ENST00000618773 MYOM3Q5VTT5 1437 aa16.47■□□□□ 0.23
UCHL3-206ENST00000618773 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
UCHL3-206ENST00000618773 PCDH10Q9P2E7 1040 aa16.46■□□□□ 0.23
UCHL3-206ENST00000618773 TNRQ92752 1358 aa16.46■□□□□ 0.23
UCHL3-206ENST00000618773 SPATA31D1Q6ZQQ2 1576 aa16.45■□□□□ 0.22
UCHL3-206ENST00000618773 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
UCHL3-206ENST00000618773 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
UCHL3-206ENST00000618773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
UCHL3-206ENST00000618773 MIA2Q96PC5 1412 aa16.43■□□□□ 0.22
UCHL3-206ENST00000618773 DEPDC5O75140 1603 aa16.42■□□□□ 0.22
UCHL3-206ENST00000618773 STRCP1A6NGW2 1772 aa16.42■□□□□ 0.22
UCHL3-206ENST00000618773 PKD2Q13563 968 aa16.42■□□□□ 0.22
UCHL3-206ENST00000618773 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
UCHL3-206ENST00000618773 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
UCHL3-206ENST00000618773 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
UCHL3-206ENST00000618773 VWDEQ8N2E2 1590 aa16.41■□□□□ 0.22
UCHL3-206ENST00000618773 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
UCHL3-206ENST00000618773 NLRP1Q9C000 1473 aa16.41■□□□□ 0.22
UCHL3-206ENST00000618773 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
UCHL3-206ENST00000618773 DUOX2Q9NRD8 1548 aa16.4■□□□□ 0.22
UCHL3-206ENST00000618773 PDCD7Q8N8D1 485 aaKnown RBP16.4■□□□□ 0.22
UCHL3-206ENST00000618773 ERVK-7P63135 1459 aa16.4■□□□□ 0.22
UCHL3-206ENST00000618773 L3MBTL3Q96JM7 780 aaPredicted RBP16.39■□□□□ 0.21
UCHL3-206ENST00000618773 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
UCHL3-206ENST00000618773 WASHC2CQ9Y4E1 1318 aa16.39■□□□□ 0.21
UCHL3-206ENST00000618773 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
UCHL3-206ENST00000618773 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
UCHL3-206ENST00000618773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
UCHL3-206ENST00000618773 ABCC5O15440 1437 aa16.36■□□□□ 0.21
UCHL3-206ENST00000618773 CABP2Q9NPB3 220 aa16.36■□□□□ 0.21
UCHL3-206ENST00000618773 MED14O60244 1454 aa16.35■□□□□ 0.21
UCHL3-206ENST00000618773 ALKQ9UM73 1620 aa16.35■□□□□ 0.21
UCHL3-206ENST00000618773 CPS1P31327 1500 aa16.35■□□□□ 0.21
UCHL3-206ENST00000618773 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
UCHL3-206ENST00000618773 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
UCHL3-206ENST00000618773 DAPK1P53355 1430 aa16.33■□□□□ 0.2
UCHL3-206ENST00000618773 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
UCHL3-206ENST00000618773 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
UCHL3-206ENST00000618773 SNPHO15079 494 aa16.32■□□□□ 0.2
UCHL3-206ENST00000618773 ST18O60284 1047 aa16.32■□□□□ 0.2
UCHL3-206ENST00000618773 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
UCHL3-206ENST00000618773 ILDR2Q71H61 639 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms