RNA–Protein interactions for RNA: ENST00000617800.4

ANK3-229, Transcript of ankyrin 3, human

TSL 5

Gene ANK3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANK3-229	ENST00000617800	ZNF777	Q9ULD5	760 aa	Predicted RBP	9.43	□□□□□ -0.9
ANK3-229	ENST00000617800	PHLDB1	Q86UU1	1377 aa		9.42	□□□□□ -0.9
ANK3-229	ENST00000617800	MS4A4A	Q96JQ5	239 aa		9.42	□□□□□ -0.9
ANK3-229	ENST00000617800	DNMT1	P26358	1616 aa	Known RBP	9.42	□□□□□ -0.9
ANK3-229	ENST00000617800	ARHGEF5	Q12774	1597 aa		9.41	□□□□□ -0.9
ANK3-229	ENST00000617800	ZNF518A	Q6AHZ1	1483 aa		9.41	□□□□□ -0.9
ANK3-229	ENST00000617800	ATP7A	Q04656	1500 aa		9.41	□□□□□ -0.9
ANK3-229	ENST00000617800	TRAPPC8	Q9Y2L5	1435 aa		9.4	□□□□□ -0.9
ANK3-229	ENST00000617800	FER1L4	A9Z1Z3	1794 aa		9.4	□□□□□ -0.9
ANK3-229	ENST00000617800	RAPGEF3	O95398	923 aa		9.4	□□□□□ -0.9
ANK3-229	ENST00000617800	PLEKHH2	Q8IVE3	1493 aa		9.4	□□□□□ -0.91
ANK3-229	ENST00000617800	EFCAB2	Q5VUJ9	269 aa		9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	SPRYD3	Q8NCJ5	442 aa		9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	SLAIN1	Q8ND83	568 aa		9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	CFDP1	Q9UEE9	299 aa	Predicted RBP	9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	BCORL1	Q5H9F3	1711 aa		9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	FGD6	Q6ZV73	1430 aa		9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	YEATS2	Q9ULM3	1422 aa		9.39	□□□□□ -0.91
ANK3-229	ENST00000617800	ZNF644	Q9H582	1327 aa	Predicted RBP	9.38	□□□□□ -0.91
ANK3-229	ENST00000617800	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	9.38	□□□□□ -0.91
ANK3-229	ENST00000617800	RYDEN	Q9NUL5	291 aa	Known RBP	9.38	□□□□□ -0.91
ANK3-229	ENST00000617800	CCDC141	Q6ZP82	1450 aa		9.38	□□□□□ -0.91
ANK3-229	ENST00000617800	RIMS1	Q86UR5	1692 aa	Known RBP	9.38	□□□□□ -0.91
ANK3-229	ENST00000617800	MAST1	Q9Y2H9	1570 aa		9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	TCOF1	Q13428	1488 aa	Known RBP	9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	PLCB2	Q00722	1185 aa		9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	DPY19L2	Q6NUT2	758 aa		9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	FAM163A	Q96GL9	167 aa	Predicted RBP	9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	MADD	Q8WXG6	1647 aa		9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	PLXNC1	O60486	1568 aa		9.37	□□□□□ -0.91
ANK3-229	ENST00000617800	MBD5	Q9P267	1494 aa		9.36	□□□□□ -0.91
ANK3-229	ENST00000617800	MIA2	Q96PC5	1412 aa		9.36	□□□□□ -0.91
ANK3-229	ENST00000617800	PPP1R37	O75864	691 aa		9.35	□□□□□ -0.91
ANK3-229	ENST00000617800	HNRNPM	P52272	730 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
ANK3-229	ENST00000617800	RERE	Q9P2R6	1566 aa		9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	KIAA1107	Q9UPP5	1409 aa		9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	L3MBTL3	Q96JM7	780 aa	Predicted RBP	9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	CFAP44	Q96MT7	982 aa		9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	MYT1L	Q9UL68	1186 aa		9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	MAGI2	Q86UL8	1455 aa		9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	MLH3	Q9UHC1	1453 aa		9.34	□□□□□ -0.91
ANK3-229	ENST00000617800	ADAMTSL3	P82987	1691 aa		9.33	□□□□□ -0.92
ANK3-229	ENST00000617800	C9orf84	Q5VXU9	1444 aa		9.33	□□□□□ -0.92
ANK3-229	ENST00000617800	POTEM	A6NI47	508 aa		9.33	□□□□□ -0.92
ANK3-229	ENST00000617800	LCE2D	Q5TA82	110 aa	Predicted RBP	9.33	□□□□□ -0.92
ANK3-229	ENST00000617800	AFAP1	Q8N556	730 aa		9.33	□□□□□ -0.92
ANK3-229	ENST00000617800	CEP152	O94986	1710 aa		9.33	□□□□□ -0.92
ANK3-229	ENST00000617800	CLTC	Q00610	1675 aa	Known RBP	9.32	□□□□□ -0.92
ANK3-229	ENST00000617800	GCC2	Q8IWJ2	1684 aa		9.32	□□□□□ -0.92
ANK3-229	ENST00000617800	DAPK1	P53355	1430 aa		9.32	□□□□□ -0.92
ANK3-229	ENST00000617800	POTEG	Q6S5H5	508 aa		9.32	□□□□□ -0.92
ANK3-229	ENST00000617800	SHANK2	Q9UPX8	1470 aa		9.32	□□□□□ -0.92
ANK3-229	ENST00000617800	EIF2AK4	Q9P2K8	1649 aa	Known RBP	9.31	□□□□□ -0.92
ANK3-229	ENST00000617800	C3orf67	Q6ZVT6	689 aa		9.31	□□□□□ -0.92
ANK3-229	ENST00000617800	ATP10A	O60312	1499 aa		9.31	□□□□□ -0.92
ANK3-229	ENST00000617800	FAM50A	Q14320	339 aa	Known RBP	9.3	□□□□□ -0.92
ANK3-229	ENST00000617800	ABCC5	O15440	1437 aa		9.3	□□□□□ -0.92
ANK3-229	ENST00000617800	SPAG9	O60271	1321 aa	Known RBP	9.3	□□□□□ -0.92
ANK3-229	ENST00000617800	A2M	P01023	1474 aa		9.29	□□□□□ -0.92
ANK3-229	ENST00000617800	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	9.29	□□□□□ -0.92
ANK3-229	ENST00000617800	PLSCR2	Q9NRY7	297 aa		9.29	□□□□□ -0.92
ANK3-229	ENST00000617800	RNF17	Q9BXT8	1623 aa	Known RBP	9.29	□□□□□ -0.92
ANK3-229	ENST00000617800	C3	P01024	1663 aa		9.29	□□□□□ -0.92
ANK3-229	ENST00000617800	RRBP1	Q9P2E9	1410 aa	Known RBP	9.28	□□□□□ -0.92
ANK3-229	ENST00000617800	DEPDC5	O75140	1603 aa		9.27	□□□□□ -0.92
ANK3-229	ENST00000617800	MROH1	Q8NDA8	1641 aa		9.27	□□□□□ -0.92
ANK3-229	ENST00000617800	AGL	P35573	1532 aa		9.27	□□□□□ -0.93
ANK3-229	ENST00000617800	MROH2A	A6NES4	1674 aa		9.27	□□□□□ -0.93
ANK3-229	ENST00000617800	ZC3H13	Q5T200	1668 aa	Known RBP	9.27	□□□□□ -0.93
ANK3-229	ENST00000617800	ARID4B	Q4LE39	1312 aa	Predicted RBP	9.27	□□□□□ -0.93
ANK3-229	ENST00000617800	DUOX2	Q9NRD8	1548 aa		9.26	□□□□□ -0.93
ANK3-229	ENST00000617800	RTEL1-TNFRSF6B	F6WH68	1400 aa		9.26	□□□□□ -0.93
ANK3-229	ENST00000617800	KDM4F	A0A1W2PPD8	638 aa		9.26	□□□□□ -0.93
ANK3-229	ENST00000617800		G3V3G9	751 aa		9.26	□□□□□ -0.93
ANK3-229	ENST00000617800	MICALL2	Q8IY33	904 aa		9.26	□□□□□ -0.93
ANK3-229	ENST00000617800	BOLA1	Q9Y3E2	137 aa		9.26	□□□□□ -0.93
ANK3-229	ENST00000617800	PTPRK	Q15262	1439 aa		9.25	□□□□□ -0.93
ANK3-229	ENST00000617800	CAMSAP1	Q5T5Y3	1602 aa		9.25	□□□□□ -0.93
ANK3-229	ENST00000617800	MLEC	Q14165	292 aa		9.25	□□□□□ -0.93
ANK3-229	ENST00000617800	ADGRL2	O95490	1459 aa		9.25	□□□□□ -0.93
ANK3-229	ENST00000617800	CFAP65	Q6ZU64	1925 aa	Known RBP	9.25	□□□□□ -0.93
ANK3-229	ENST00000617800	ITGAE	P38570	1179 aa		9.24	□□□□□ -0.93
ANK3-229	ENST00000617800	TSHZ2	Q9NRE2	1034 aa		9.24	□□□□□ -0.93
ANK3-229	ENST00000617800	UNC13B	O14795	1591 aa		9.24	□□□□□ -0.93
ANK3-229	ENST00000617800	KIF15	Q9NS87	1388 aa		9.24	□□□□□ -0.93
ANK3-229	ENST00000617800	PRDM15	P57071	1507 aa	Predicted RBP	9.23	□□□□□ -0.93
ANK3-229	ENST00000617800	ST18	O60284	1047 aa		9.23	□□□□□ -0.93
ANK3-229	ENST00000617800	CHIC2	Q9UKJ5	165 aa		9.23	□□□□□ -0.93
ANK3-229	ENST00000617800	KDM5D	Q9BY66	1539 aa		9.22	□□□□□ -0.93
ANK3-229	ENST00000617800	PREX1	Q8TCU6	1659 aa		9.22	□□□□□ -0.93
ANK3-229	ENST00000617800	MYO3A	Q8NEV4	1616 aa		9.21	□□□□□ -0.93
ANK3-229	ENST00000617800	TSPY4	P0CV99	314 aa		9.21	□□□□□ -0.94
ANK3-229	ENST00000617800	TSPY10	P0CW01	314 aa		9.21	□□□□□ -0.94
ANK3-229	ENST00000617800	ANKRD30A	Q9BXX3	1397 aa		9.21	□□□□□ -0.94
ANK3-229	ENST00000617800	ERBIN	Q96RT1	1412 aa		9.21	□□□□□ -0.94
ANK3-229	ENST00000617800	PTPRM	P28827	1452 aa		9.21	□□□□□ -0.94
ANK3-229	ENST00000617800	SNPH	O15079	494 aa		9.2	□□□□□ -0.94
ANK3-229	ENST00000617800	CADPS2	Q86UW7	1296 aa		9.2	□□□□□ -0.94
ANK3-229	ENST00000617800	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	9.2	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms