RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 ERVK-7P63135 1459 aa11.57□□□□□ -0.56
FAM228B-209ENST00000615135 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
FAM228B-209ENST00000615135 CCNB3Q8WWL7 1395 aa11.57□□□□□ -0.56
FAM228B-209ENST00000615135 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
FAM228B-209ENST00000615135 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
FAM228B-209ENST00000615135 ZNF644Q9H582 1327 aaPredicted RBP11.56□□□□□ -0.56
FAM228B-209ENST00000615135 PRDM15P57071 1507 aaPredicted RBP11.55□□□□□ -0.56
FAM228B-209ENST00000615135 PROSER2Q86WR7 435 aaPredicted RBP11.55□□□□□ -0.56
FAM228B-209ENST00000615135 EID1Q9Y6B2 187 aa11.54□□□□□ -0.56
FAM228B-209ENST00000615135 ABCC3O15438 1527 aa11.54□□□□□ -0.56
FAM228B-209ENST00000615135 NKTRP30414 1462 aaKnown RBP11.53□□□□□ -0.56
FAM228B-209ENST00000615135 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
FAM228B-209ENST00000615135 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
FAM228B-209ENST00000615135 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
FAM228B-209ENST00000615135 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
FAM228B-209ENST00000615135 SSUH2Q9Y2M2 353 aa11.53□□□□□ -0.56
FAM228B-209ENST00000615135 MSH6P52701 1360 aa11.53□□□□□ -0.56
FAM228B-209ENST00000615135 TET3O43151 1660 aa11.52□□□□□ -0.56
FAM228B-209ENST00000615135 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
FAM228B-209ENST00000615135 TIAM1Q13009 1591 aa11.52□□□□□ -0.57
FAM228B-209ENST00000615135 SHPRHQ149N8 1683 aa11.52□□□□□ -0.57
FAM228B-209ENST00000615135 TMEM2Q9UHN6 1383 aa11.52□□□□□ -0.57
FAM228B-209ENST00000615135 NWD1Q149M9 1564 aa11.51□□□□□ -0.57
FAM228B-209ENST00000615135 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
FAM228B-209ENST00000615135 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
FAM228B-209ENST00000615135 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
FAM228B-209ENST00000615135 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
FAM228B-209ENST00000615135 RGS12O14924 1447 aa11.5□□□□□ -0.57
FAM228B-209ENST00000615135 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
FAM228B-209ENST00000615135 AHDC1Q5TGY3 1603 aaPredicted RBP11.49□□□□□ -0.57
FAM228B-209ENST00000615135 RBM6P78332 1123 aaKnown RBP11.49□□□□□ -0.57
FAM228B-209ENST00000615135 SETBP1Q9Y6X0 1596 aa11.49□□□□□ -0.57
FAM228B-209ENST00000615135 AFF2P51816 1311 aa11.48□□□□□ -0.57
FAM228B-209ENST00000615135 ARHGAP31Q2M1Z3 1444 aa11.48□□□□□ -0.57
FAM228B-209ENST00000615135 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
FAM228B-209ENST00000615135 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
FAM228B-209ENST00000615135 CFAP65Q6ZU64 1925 aaKnown RBP11.48□□□□□ -0.57
FAM228B-209ENST00000615135 KDM5AP29375 1690 aaKnown RBP11.46□□□□□ -0.57
FAM228B-209ENST00000615135 SLC26A8Q96RN1 970 aa11.46□□□□□ -0.57
FAM228B-209ENST00000615135 MROH1Q8NDA8 1641 aa11.46□□□□□ -0.58
FAM228B-209ENST00000615135 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
FAM228B-209ENST00000615135 ATAD2Q6PL18 1390 aa11.45□□□□□ -0.58
FAM228B-209ENST00000615135 QTRT2Q9H974 415 aaKnown RBP11.45□□□□□ -0.58
FAM228B-209ENST00000615135 EIF2AK4Q9P2K8 1649 aaKnown RBP11.44□□□□□ -0.58
FAM228B-209ENST00000615135 MTUS2Q5JR59 1369 aa11.43□□□□□ -0.58
FAM228B-209ENST00000615135 PIK3C2BO00750 1634 aa11.43□□□□□ -0.58
FAM228B-209ENST00000615135 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
FAM228B-209ENST00000615135 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
FAM228B-209ENST00000615135 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
FAM228B-209ENST00000615135 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
FAM228B-209ENST00000615135 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
FAM228B-209ENST00000615135 ARHGEF5Q12774 1597 aa11.42□□□□□ -0.58
FAM228B-209ENST00000615135 EFCAB6Q5THR3 1501 aa11.42□□□□□ -0.58
FAM228B-209ENST00000615135 TSPY4P0CV99 314 aa11.42□□□□□ -0.58
FAM228B-209ENST00000615135 TSPY10P0CW01 314 aa11.42□□□□□ -0.58
FAM228B-209ENST00000615135 PCGF6Q9BYE7 350 aa11.42□□□□□ -0.58
FAM228B-209ENST00000615135 CHD2O14647 1828 aaKnown RBP11.42□□□□□ -0.58
FAM228B-209ENST00000615135 CEP152O94986 1710 aa11.41□□□□□ -0.58
FAM228B-209ENST00000615135 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
FAM228B-209ENST00000615135 NGLY1Q96IV0 654 aa11.41□□□□□ -0.58
FAM228B-209ENST00000615135 SETD5Q9C0A6 1442 aa11.41□□□□□ -0.58
FAM228B-209ENST00000615135 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.58
FAM228B-209ENST00000615135 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
FAM228B-209ENST00000615135 IDI1Q13907 227 aa11.39□□□□□ -0.59
FAM228B-209ENST00000615135 LRP5O75197 1615 aa11.38□□□□□ -0.59
FAM228B-209ENST00000615135 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
FAM228B-209ENST00000615135 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
FAM228B-209ENST00000615135 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
FAM228B-209ENST00000615135 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
FAM228B-209ENST00000615135 EHBP1L1Q8N3D4 1523 aa11.37□□□□□ -0.59
FAM228B-209ENST00000615135 ATF3P18847 181 aa11.36□□□□□ -0.59
FAM228B-209ENST00000615135 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
FAM228B-209ENST00000615135 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
FAM228B-209ENST00000615135 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
FAM228B-209ENST00000615135 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
FAM228B-209ENST00000615135 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
FAM228B-209ENST00000615135 PLEKHG1Q9ULL1 1385 aa11.35□□□□□ -0.59
FAM228B-209ENST00000615135 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
FAM228B-209ENST00000615135 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
FAM228B-209ENST00000615135 ZFYVE9O95405 1425 aa11.33□□□□□ -0.6
FAM228B-209ENST00000615135 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 ADGRB3O60242 1522 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 ASXL1Q8IXJ9 1541 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 DUOX2Q9NRD8 1548 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-209ENST00000615135 SLC52A1Q9NWF4 448 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 TRPC5Q9UL62 973 aaPredicted RBP11.32□□□□□ -0.6
FAM228B-209ENST00000615135 NOS1P29475 1434 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 DCCP43146 1447 aa11.32□□□□□ -0.6
FAM228B-209ENST00000615135 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
FAM228B-209ENST00000615135 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
FAM228B-209ENST00000615135 EP400Q96L91 3159 aa11.31□□□□□ -0.6
FAM228B-209ENST00000615135 LMTK2Q8IWU2 1503 aa11.3□□□□□ -0.6
FAM228B-209ENST00000615135 ATRNO75882 1429 aa11.3□□□□□ -0.6
FAM228B-209ENST00000615135 MIER1Q8N108 512 aa11.3□□□□□ -0.6
FAM228B-209ENST00000615135 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
FAM228B-209ENST00000615135 BCANQ96GW7 911 aa11.3□□□□□ -0.6
FAM228B-209ENST00000615135 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
FAM228B-209ENST00000615135 USP21Q9UK80 565 aa11.29□□□□□ -0.6
FAM228B-209ENST00000615135 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms