RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
SMIM11B-201ENST00000612624 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.44
SMIM11B-201ENST00000612624 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
SMIM11B-201ENST00000612624 MIER1Q8N108 512 aa12.27□□□□□ -0.45
SMIM11B-201ENST00000612624 CFDP1Q9UEE9 299 aaPredicted RBP12.27□□□□□ -0.45
SMIM11B-201ENST00000612624 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
SMIM11B-201ENST00000612624 RXRBP28702 533 aa12.26□□□□□ -0.45
SMIM11B-201ENST00000612624 HNRNPMP52272 730 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMIM11B-201ENST00000612624 ZC3H13Q5T200 1668 aaKnown RBP12.24□□□□□ -0.45
SMIM11B-201ENST00000612624 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
SMIM11B-201ENST00000612624 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
SMIM11B-201ENST00000612624 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
SMIM11B-201ENST00000612624 SCAF11Q99590 1463 aaKnown RBP12.23□□□□□ -0.45
SMIM11B-201ENST00000612624 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
SMIM11B-201ENST00000612624 LRP6O75581 1613 aa12.22□□□□□ -0.45
SMIM11B-201ENST00000612624 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
SMIM11B-201ENST00000612624 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
SMIM11B-201ENST00000612624 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
SMIM11B-201ENST00000612624 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
SMIM11B-201ENST00000612624 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.46
SMIM11B-201ENST00000612624 ABCC5O15440 1437 aa12.2□□□□□ -0.46
SMIM11B-201ENST00000612624 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
SMIM11B-201ENST00000612624 WASHC2CQ9Y4E1 1318 aa12.19□□□□□ -0.46
SMIM11B-201ENST00000612624 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
SMIM11B-201ENST00000612624 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
SMIM11B-201ENST00000612624 SLIT1O75093 1534 aa12.19□□□□□ -0.46
SMIM11B-201ENST00000612624 DAPK1P53355 1430 aa12.19□□□□□ -0.46
SMIM11B-201ENST00000612624 ABCC3O15438 1527 aa12.18□□□□□ -0.46
SMIM11B-201ENST00000612624 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
SMIM11B-201ENST00000612624 KCNA6P17658 529 aa12.17□□□□□ -0.46
SMIM11B-201ENST00000612624 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
SMIM11B-201ENST00000612624 COL16A1Q07092 1604 aaPredicted RBP12.16□□□□□ -0.46
SMIM11B-201ENST00000612624 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
SMIM11B-201ENST00000612624 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
SMIM11B-201ENST00000612624 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
SMIM11B-201ENST00000612624 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
SMIM11B-201ENST00000612624 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.46
SMIM11B-201ENST00000612624 RGS12O14924 1447 aa12.15□□□□□ -0.46
SMIM11B-201ENST00000612624 LTKP29376 864 aa12.15□□□□□ -0.46
SMIM11B-201ENST00000612624 KIF3BO15066 747 aa12.14□□□□□ -0.47
SMIM11B-201ENST00000612624 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
SMIM11B-201ENST00000612624 MSH6P52701 1360 aa12.14□□□□□ -0.47
SMIM11B-201ENST00000612624 ATAD2Q6PL18 1390 aa12.14□□□□□ -0.47
SMIM11B-201ENST00000612624 SETBP1Q9Y6X0 1596 aa12.13□□□□□ -0.47
SMIM11B-201ENST00000612624 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
SMIM11B-201ENST00000612624 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
SMIM11B-201ENST00000612624 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
SMIM11B-201ENST00000612624 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
SMIM11B-201ENST00000612624 CCDC125Q86Z20 511 aa12.12□□□□□ -0.47
SMIM11B-201ENST00000612624 ERVK-7P63135 1459 aa12.12□□□□□ -0.47
SMIM11B-201ENST00000612624 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
SMIM11B-201ENST00000612624 ADGRL2O95490 1459 aa12.11□□□□□ -0.47
SMIM11B-201ENST00000612624 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
SMIM11B-201ENST00000612624 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
SMIM11B-201ENST00000612624 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
SMIM11B-201ENST00000612624 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
SMIM11B-201ENST00000612624 CHIC2Q9UKJ5 165 aa12.1□□□□□ -0.47
SMIM11B-201ENST00000612624 AHDC1Q5TGY3 1603 aaPredicted RBP12.1□□□□□ -0.47
SMIM11B-201ENST00000612624 MROH1Q8NDA8 1641 aa12.1□□□□□ -0.47
SMIM11B-201ENST00000612624 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
SMIM11B-201ENST00000612624 NWD1Q149M9 1564 aa12.09□□□□□ -0.47
SMIM11B-201ENST00000612624 AFF2P51816 1311 aa12.09□□□□□ -0.47
SMIM11B-201ENST00000612624 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
SMIM11B-201ENST00000612624 ITGAEP38570 1179 aa12.08□□□□□ -0.48
SMIM11B-201ENST00000612624 CEP152O94986 1710 aa12.08□□□□□ -0.48
SMIM11B-201ENST00000612624 UBR1Q8IWV7 1749 aa12.08□□□□□ -0.48
SMIM11B-201ENST00000612624 EIF2AK4Q9P2K8 1649 aaKnown RBP12.08□□□□□ -0.48
SMIM11B-201ENST00000612624 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
SMIM11B-201ENST00000612624 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
SMIM11B-201ENST00000612624 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
SMIM11B-201ENST00000612624 LRP5O75197 1615 aa12.06□□□□□ -0.48
SMIM11B-201ENST00000612624 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
SMIM11B-201ENST00000612624 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 RGL2O15211 777 aa12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 RSPH4AQ5TD94 716 aa12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 QTRT2Q9H974 415 aaKnown RBP12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 TET3O43151 1660 aa12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
SMIM11B-201ENST00000612624 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
SMIM11B-201ENST00000612624 DIP2AQ14689 1571 aa12.04□□□□□ -0.48
SMIM11B-201ENST00000612624 ARHGAP31Q2M1Z3 1444 aa12.03□□□□□ -0.48
SMIM11B-201ENST00000612624 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
SMIM11B-201ENST00000612624 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
SMIM11B-201ENST00000612624 RRP7BPQ9NSQ0 103 aa12.03□□□□□ -0.48
SMIM11B-201ENST00000612624 SETD5Q9C0A6 1442 aa12.03□□□□□ -0.48
SMIM11B-201ENST00000612624 UNC13BO14795 1591 aa12.02□□□□□ -0.49
SMIM11B-201ENST00000612624 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
SMIM11B-201ENST00000612624 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
SMIM11B-201ENST00000612624 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
SMIM11B-201ENST00000612624 ROCK1Q13464 1354 aa12.01□□□□□ -0.49
SMIM11B-201ENST00000612624 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
SMIM11B-201ENST00000612624 NAIPQ13075 1403 aa12.01□□□□□ -0.49
SMIM11B-201ENST00000612624 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
SMIM11B-201ENST00000612624 ERBINQ96RT1 1412 aa12□□□□□ -0.49
SMIM11B-201ENST00000612624 KDM5AP29375 1690 aaKnown RBP12□□□□□ -0.49
SMIM11B-201ENST00000612624 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
SMIM11B-201ENST00000612624 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms