RNA–Protein interactions for RNA: ENST00000611331.1

LINC01949-202, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 2

Gene LINC01949, Length 1,618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-202ENST00000611331 RTEL1-TNFRSF6BF6WH68 1400 aa12.2□□□□□ -0.46
LINC01949-202ENST00000611331 MSH6P52701 1360 aa12.2□□□□□ -0.46
LINC01949-202ENST00000611331 EID1Q9Y6B2 187 aa12.19□□□□□ -0.46
LINC01949-202ENST00000611331 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
LINC01949-202ENST00000611331 SLIT1O75093 1534 aa12.19□□□□□ -0.46
LINC01949-202ENST00000611331 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
LINC01949-202ENST00000611331 KCNA6P17658 529 aa12.19□□□□□ -0.46
LINC01949-202ENST00000611331 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
LINC01949-202ENST00000611331 PRDM15P57071 1507 aaPredicted RBP12.18□□□□□ -0.46
LINC01949-202ENST00000611331 ERVK-7P63135 1459 aa12.18□□□□□ -0.46
LINC01949-202ENST00000611331 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
LINC01949-202ENST00000611331 ATAD2Q6PL18 1390 aa12.17□□□□□ -0.46
LINC01949-202ENST00000611331 AFF2P51816 1311 aa12.17□□□□□ -0.46
LINC01949-202ENST00000611331 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
LINC01949-202ENST00000611331 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
LINC01949-202ENST00000611331 CASKIN1Q8WXD9 1431 aa12.16□□□□□ -0.46
LINC01949-202ENST00000611331 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.46
LINC01949-202ENST00000611331 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
LINC01949-202ENST00000611331 MBD5Q9P267 1494 aa12.15□□□□□ -0.46
LINC01949-202ENST00000611331 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.47
LINC01949-202ENST00000611331 ABCC3O15438 1527 aa12.14□□□□□ -0.47
LINC01949-202ENST00000611331 ZNF644Q9H582 1327 aaPredicted RBP12.13□□□□□ -0.47
LINC01949-202ENST00000611331 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
LINC01949-202ENST00000611331 QTRT2Q9H974 415 aaKnown RBP12.12□□□□□ -0.47
LINC01949-202ENST00000611331 NWD1Q149M9 1564 aa12.12□□□□□ -0.47
LINC01949-202ENST00000611331 KDM5AP29375 1690 aaKnown RBP12.11□□□□□ -0.47
LINC01949-202ENST00000611331 SLC26A8Q96RN1 970 aa12.11□□□□□ -0.47
LINC01949-202ENST00000611331 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
LINC01949-202ENST00000611331 TMEM2Q9UHN6 1383 aa12.11□□□□□ -0.47
LINC01949-202ENST00000611331 NGLY1Q96IV0 654 aa12.1□□□□□ -0.47
LINC01949-202ENST00000611331 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
LINC01949-202ENST00000611331 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
LINC01949-202ENST00000611331 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
LINC01949-202ENST00000611331 DIP2AQ14689 1571 aa12.08□□□□□ -0.48
LINC01949-202ENST00000611331 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.48
LINC01949-202ENST00000611331 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.48
LINC01949-202ENST00000611331 LRP5O75197 1615 aa12.08□□□□□ -0.48
LINC01949-202ENST00000611331 TET3O43151 1660 aa12.08□□□□□ -0.48
LINC01949-202ENST00000611331 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
LINC01949-202ENST00000611331 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
LINC01949-202ENST00000611331 PIK3C2BO00750 1634 aa12.07□□□□□ -0.48
LINC01949-202ENST00000611331 CEP152O94986 1710 aa12.06□□□□□ -0.48
LINC01949-202ENST00000611331 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
LINC01949-202ENST00000611331 C14orf37Q86TY3 774 aa12.05□□□□□ -0.48
LINC01949-202ENST00000611331 ARXQ96QS3 562 aa12.04□□□□□ -0.48
LINC01949-202ENST00000611331 EFCAB6Q5THR3 1501 aa12.04□□□□□ -0.48
LINC01949-202ENST00000611331 BCANQ96GW7 911 aa12.04□□□□□ -0.48
LINC01949-202ENST00000611331 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
LINC01949-202ENST00000611331 MTUS2Q5JR59 1369 aa12.03□□□□□ -0.48
LINC01949-202ENST00000611331 ATF3P18847 181 aa12.02□□□□□ -0.49
LINC01949-202ENST00000611331 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
LINC01949-202ENST00000611331 NCOA3Q9Y6Q9 1424 aa12.02□□□□□ -0.49
LINC01949-202ENST00000611331 MROH1Q8NDA8 1641 aa12.02□□□□□ -0.49
LINC01949-202ENST00000611331 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
LINC01949-202ENST00000611331 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
LINC01949-202ENST00000611331 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
LINC01949-202ENST00000611331 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
LINC01949-202ENST00000611331 EIF2AK4Q9P2K8 1649 aaKnown RBP12.01□□□□□ -0.49
LINC01949-202ENST00000611331 BRINP3Q76B58 766 aa12□□□□□ -0.49
LINC01949-202ENST00000611331 EP400Q96L91 3159 aa12□□□□□ -0.49
LINC01949-202ENST00000611331 SETD5Q9C0A6 1442 aa12□□□□□ -0.49
LINC01949-202ENST00000611331 SIPA1L2Q9P2F8 1722 aaPredicted RBP12□□□□□ -0.49
LINC01949-202ENST00000611331 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
LINC01949-202ENST00000611331 ARHGAP31Q2M1Z3 1444 aa11.99□□□□□ -0.49
LINC01949-202ENST00000611331 TSPY4P0CV99 314 aa11.99□□□□□ -0.49
LINC01949-202ENST00000611331 TSPY10P0CW01 314 aa11.99□□□□□ -0.49
LINC01949-202ENST00000611331 C19orf44Q9H6X5 657 aa11.99□□□□□ -0.49
LINC01949-202ENST00000611331 MYT1Q01538 1121 aa11.98□□□□□ -0.49
LINC01949-202ENST00000611331 IFFO2Q5TF58 517 aa11.98□□□□□ -0.49
LINC01949-202ENST00000611331 LRRC59Q96AG4 307 aaKnown RBP11.98□□□□□ -0.49
LINC01949-202ENST00000611331 TRPC5Q9UL62 973 aaPredicted RBP11.98□□□□□ -0.49
LINC01949-202ENST00000611331 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
LINC01949-202ENST00000611331 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
LINC01949-202ENST00000611331 USP21Q9UK80 565 aa11.97□□□□□ -0.49
LINC01949-202ENST00000611331 YY1P25490 414 aa11.97□□□□□ -0.49
LINC01949-202ENST00000611331 ASXL1Q8IXJ9 1541 aa11.97□□□□□ -0.49
LINC01949-202ENST00000611331 NHSL1Q5SYE7 1610 aa11.96□□□□□ -0.49
LINC01949-202ENST00000611331 PNPLA6Q8IY17 1366 aa11.96□□□□□ -0.49
LINC01949-202ENST00000611331 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
LINC01949-202ENST00000611331 IDI1Q13907 227 aa11.95□□□□□ -0.5
LINC01949-202ENST00000611331 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
LINC01949-202ENST00000611331 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
LINC01949-202ENST00000611331 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
LINC01949-202ENST00000611331 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
LINC01949-202ENST00000611331 ADGRB3O60242 1522 aa11.93□□□□□ -0.5
LINC01949-202ENST00000611331 ATRNO75882 1429 aa11.93□□□□□ -0.5
LINC01949-202ENST00000611331 DEFB132Q7Z7B7 95 aa11.93□□□□□ -0.5
LINC01949-202ENST00000611331 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
LINC01949-202ENST00000611331 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
LINC01949-202ENST00000611331 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
LINC01949-202ENST00000611331 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
LINC01949-202ENST00000611331 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
LINC01949-202ENST00000611331 HRCP23327 699 aa11.91□□□□□ -0.5
LINC01949-202ENST00000611331 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
LINC01949-202ENST00000611331 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
LINC01949-202ENST00000611331 DCCP43146 1447 aa11.9□□□□□ -0.5
LINC01949-202ENST00000611331 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
LINC01949-202ENST00000611331 TBX22Q9Y458 520 aa11.89□□□□□ -0.51
LINC01949-202ENST00000611331 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
LINC01949-202ENST00000611331 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms