RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 LMTK2Q8IWU2 1503 aa12.37□□□□□ -0.43
ZNF248-208ENST00000611278 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
ZNF248-208ENST00000611278 XIRP1Q702N8 1843 aaKnown RBP12.36□□□□□ -0.43
ZNF248-208ENST00000611278 PIK3C2BO00750 1634 aa12.36□□□□□ -0.43
ZNF248-208ENST00000611278 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
ZNF248-208ENST00000611278 CFAP65Q6ZU64 1925 aaKnown RBP12.36□□□□□ -0.43
ZNF248-208ENST00000611278 JCADQ9P266 1359 aa12.35□□□□□ -0.43
ZNF248-208ENST00000611278 NCOA3Q9Y6Q9 1424 aa12.35□□□□□ -0.43
ZNF248-208ENST00000611278 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
ZNF248-208ENST00000611278 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
ZNF248-208ENST00000611278 CROCC2H7BZ55 1655 aa12.34□□□□□ -0.43
ZNF248-208ENST00000611278 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
ZNF248-208ENST00000611278 A0A0G2JS52 829 aa12.33□□□□□ -0.44
ZNF248-208ENST00000611278 ROBO1Q9Y6N7 1651 aa12.33□□□□□ -0.44
ZNF248-208ENST00000611278 ADGRB3O60242 1522 aa12.33□□□□□ -0.44
ZNF248-208ENST00000611278 SF3B2Q13435 895 aaKnown RBP12.32□□□□□ -0.44
ZNF248-208ENST00000611278 FGD6Q6ZV73 1430 aa12.32□□□□□ -0.44
ZNF248-208ENST00000611278 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
ZNF248-208ENST00000611278 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
ZNF248-208ENST00000611278 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
ZNF248-208ENST00000611278 TET3O43151 1660 aa12.31□□□□□ -0.44
ZNF248-208ENST00000611278 RPRD2Q5VT52 1461 aaKnown RBP12.31□□□□□ -0.44
ZNF248-208ENST00000611278 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
ZNF248-208ENST00000611278 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
ZNF248-208ENST00000611278 ABCC5O15440 1437 aa12.3□□□□□ -0.44
ZNF248-208ENST00000611278 NOS1P29475 1434 aa12.3□□□□□ -0.44
ZNF248-208ENST00000611278 PHLPP1O60346 1717 aa12.3□□□□□ -0.44
ZNF248-208ENST00000611278 NUP155O75694 1391 aa12.3□□□□□ -0.44
ZNF248-208ENST00000611278 IDI1Q13907 227 aa12.3□□□□□ -0.44
ZNF248-208ENST00000611278 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
ZNF248-208ENST00000611278 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
ZNF248-208ENST00000611278 DAPK1P53355 1430 aa12.29□□□□□ -0.44
ZNF248-208ENST00000611278 PLEKHG1Q9ULL1 1385 aa12.29□□□□□ -0.44
ZNF248-208ENST00000611278 PIK3R4Q99570 1358 aa12.28□□□□□ -0.44
ZNF248-208ENST00000611278 SLC26A8Q96RN1 970 aa12.27□□□□□ -0.44
ZNF248-208ENST00000611278 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
ZNF248-208ENST00000611278 DIP2AQ14689 1571 aa12.26□□□□□ -0.45
ZNF248-208ENST00000611278 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
ZNF248-208ENST00000611278 POGKQ9P215 609 aa12.26□□□□□ -0.45
ZNF248-208ENST00000611278 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
ZNF248-208ENST00000611278 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
ZNF248-208ENST00000611278 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
ZNF248-208ENST00000611278 ADGRL2O95490 1459 aa12.24□□□□□ -0.45
ZNF248-208ENST00000611278 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
ZNF248-208ENST00000611278 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
ZNF248-208ENST00000611278 CDK12Q9NYV4 1490 aaPredicted RBP12.24□□□□□ -0.45
ZNF248-208ENST00000611278 KANK4Q5T7N3 995 aaPredicted RBP12.24□□□□□ -0.45
ZNF248-208ENST00000611278 AHDC1Q5TGY3 1603 aaPredicted RBP12.24□□□□□ -0.45
ZNF248-208ENST00000611278 COL16A1Q07092 1604 aaPredicted RBP12.23□□□□□ -0.45
ZNF248-208ENST00000611278 ZFYVE9O95405 1425 aa12.23□□□□□ -0.45
ZNF248-208ENST00000611278 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
ZNF248-208ENST00000611278 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
ZNF248-208ENST00000611278 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
ZNF248-208ENST00000611278 C19orf44Q9H6X5 657 aa12.22□□□□□ -0.45
ZNF248-208ENST00000611278 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
ZNF248-208ENST00000611278 DCCP43146 1447 aa12.21□□□□□ -0.46
ZNF248-208ENST00000611278 RXRBP28702 533 aa12.2□□□□□ -0.46
ZNF248-208ENST00000611278 TRPM2O94759 1503 aa12.2□□□□□ -0.46
ZNF248-208ENST00000611278 PSME1Q06323 249 aa12.19□□□□□ -0.46
ZNF248-208ENST00000611278 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
ZNF248-208ENST00000611278 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
ZNF248-208ENST00000611278 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
ZNF248-208ENST00000611278 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
ZNF248-208ENST00000611278 SETD1AO15047 1707 aaKnown RBP12.18□□□□□ -0.46
ZNF248-208ENST00000611278 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
ZNF248-208ENST00000611278 TMEM131LA2VDJ0 1609 aa12.18□□□□□ -0.46
ZNF248-208ENST00000611278 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
ZNF248-208ENST00000611278 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.16□□□□□ -0.46
ZNF248-208ENST00000611278 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
ZNF248-208ENST00000611278 LRP6O75581 1613 aa12.15□□□□□ -0.46
ZNF248-208ENST00000611278 RGL3Q3MIN7 710 aa12.14□□□□□ -0.47
ZNF248-208ENST00000611278 ADAMTS13Q76LX8 1427 aa12.14□□□□□ -0.47
ZNF248-208ENST00000611278 SETD5Q9C0A6 1442 aa12.14□□□□□ -0.47
ZNF248-208ENST00000611278 UNC13BO14795 1591 aa12.14□□□□□ -0.47
ZNF248-208ENST00000611278 MYO5BQ9ULV0 1848 aa12.14□□□□□ -0.47
ZNF248-208ENST00000611278 ZEB1P37275 1124 aaPredicted RBP12.13□□□□□ -0.47
ZNF248-208ENST00000611278 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
ZNF248-208ENST00000611278 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
ZNF248-208ENST00000611278 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
ZNF248-208ENST00000611278 AFF2P51816 1311 aa12.11□□□□□ -0.47
ZNF248-208ENST00000611278 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
ZNF248-208ENST00000611278 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
ZNF248-208ENST00000611278 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
ZNF248-208ENST00000611278 STK26Q9P289 416 aa12.1□□□□□ -0.47
ZNF248-208ENST00000611278 ASXL1Q8IXJ9 1541 aa12.1□□□□□ -0.47
ZNF248-208ENST00000611278 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
ZNF248-208ENST00000611278 IQGAP3Q86VI3 1631 aa12.09□□□□□ -0.47
ZNF248-208ENST00000611278 NHSL1Q5SYE7 1610 aa12.09□□□□□ -0.47
ZNF248-208ENST00000611278 CENPBP07199 599 aaPredicted RBP12.09□□□□□ -0.47
ZNF248-208ENST00000611278 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
ZNF248-208ENST00000611278 SETBP1Q9Y6X0 1596 aa12.08□□□□□ -0.48
ZNF248-208ENST00000611278 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
ZNF248-208ENST00000611278 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
ZNF248-208ENST00000611278 E9PCH4 1651 aa12.07□□□□□ -0.48
ZNF248-208ENST00000611278 MST1RQ04912 1400 aa12.07□□□□□ -0.48
ZNF248-208ENST00000611278 NPHP3Q7Z494 1330 aa12.07□□□□□ -0.48
ZNF248-208ENST00000611278 ESCO1Q5FWF5 840 aa12.07□□□□□ -0.48
ZNF248-208ENST00000611278 CCDC144AA2RUR9 1427 aa12.07□□□□□ -0.48
ZNF248-208ENST00000611278 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
ZNF248-208ENST00000611278 ADGRL3Q9HAR2 1447 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms