RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
LMBR1-221ENST00000609774 ZC3H13Q5T200 1668 aaKnown RBP11□□□□□ -0.65
LMBR1-221ENST00000609774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11□□□□□ -0.65
LMBR1-221ENST00000609774 FBXO31Q5XUX0 539 aaPredicted RBP10.99□□□□□ -0.65
LMBR1-221ENST00000609774 CCNB3Q8WWL7 1395 aa10.99□□□□□ -0.65
LMBR1-221ENST00000609774 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
LMBR1-221ENST00000609774 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
LMBR1-221ENST00000609774 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
LMBR1-221ENST00000609774 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
LMBR1-221ENST00000609774 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
LMBR1-221ENST00000609774 SLIT1O75093 1534 aa10.94□□□□□ -0.66
LMBR1-221ENST00000609774 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
LMBR1-221ENST00000609774 WASHC2CQ9Y4E1 1318 aa10.94□□□□□ -0.66
LMBR1-221ENST00000609774 MIER1Q8N108 512 aa10.94□□□□□ -0.66
LMBR1-221ENST00000609774 YTHDC1Q96MU7 727 aaKnown RBP10.94□□□□□ -0.66
LMBR1-221ENST00000609774 KIF3BO15066 747 aa10.93□□□□□ -0.66
LMBR1-221ENST00000609774 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
LMBR1-221ENST00000609774 CAMSAP2Q08AD1 1489 aa10.93□□□□□ -0.66
LMBR1-221ENST00000609774 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
LMBR1-221ENST00000609774 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
LMBR1-221ENST00000609774 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
LMBR1-221ENST00000609774 ARHGEF5Q12774 1597 aa10.92□□□□□ -0.66
LMBR1-221ENST00000609774 EHBP1L1Q8N3D4 1523 aa10.91□□□□□ -0.66
LMBR1-221ENST00000609774 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
LMBR1-221ENST00000609774 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
LMBR1-221ENST00000609774 ERVK-7P63135 1459 aa10.91□□□□□ -0.66
LMBR1-221ENST00000609774 SCAF11Q99590 1463 aaKnown RBP10.91□□□□□ -0.66
LMBR1-221ENST00000609774 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
LMBR1-221ENST00000609774 ABCC3O15438 1527 aa10.9□□□□□ -0.66
LMBR1-221ENST00000609774 KDM5AP29375 1690 aaKnown RBP10.9□□□□□ -0.66
LMBR1-221ENST00000609774 NCOA2Q15596 1464 aa10.9□□□□□ -0.66
LMBR1-221ENST00000609774 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.67
LMBR1-221ENST00000609774 ARHGAP31Q2M1Z3 1444 aa10.89□□□□□ -0.67
LMBR1-221ENST00000609774 MAST1Q9Y2H9 1570 aa10.89□□□□□ -0.67
LMBR1-221ENST00000609774 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
LMBR1-221ENST00000609774 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
LMBR1-221ENST00000609774 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
LMBR1-221ENST00000609774 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
LMBR1-221ENST00000609774 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
LMBR1-221ENST00000609774 SPDYE4A6NLX3 237 aa10.85□□□□□ -0.67
LMBR1-221ENST00000609774 LTKP29376 864 aa10.85□□□□□ -0.67
LMBR1-221ENST00000609774 TET3O43151 1660 aa10.85□□□□□ -0.67
LMBR1-221ENST00000609774 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
LMBR1-221ENST00000609774 DHX57Q6P158 1386 aaKnown RBP10.83□□□□□ -0.68
LMBR1-221ENST00000609774 PRDM15P57071 1507 aaPredicted RBP10.83□□□□□ -0.68
LMBR1-221ENST00000609774 NKTRP30414 1462 aaKnown RBP10.82□□□□□ -0.68
LMBR1-221ENST00000609774 TMEM94Q12767 1356 aa10.82□□□□□ -0.68
LMBR1-221ENST00000609774 TMEM2Q9UHN6 1383 aa10.82□□□□□ -0.68
LMBR1-221ENST00000609774 TSPY4P0CV99 314 aa10.82□□□□□ -0.68
LMBR1-221ENST00000609774 TSPY10P0CW01 314 aa10.82□□□□□ -0.68
LMBR1-221ENST00000609774 KCNA6P17658 529 aa10.82□□□□□ -0.68
LMBR1-221ENST00000609774 TXNDC2Q86VQ3 553 aa10.82□□□□□ -0.68
LMBR1-221ENST00000609774 RRBP1Q9P2E9 1410 aaKnown RBP10.82□□□□□ -0.68
LMBR1-221ENST00000609774 JCADQ9P266 1359 aa10.81□□□□□ -0.68
LMBR1-221ENST00000609774 LHX8Q68G74 356 aa10.81□□□□□ -0.68
LMBR1-221ENST00000609774 FGD6Q6ZV73 1430 aa10.81□□□□□ -0.68
LMBR1-221ENST00000609774 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
LMBR1-221ENST00000609774 EID1Q9Y6B2 187 aa10.8□□□□□ -0.68
LMBR1-221ENST00000609774 NCOA3Q9Y6Q9 1424 aa10.8□□□□□ -0.68
LMBR1-221ENST00000609774 CEP152O94986 1710 aa10.8□□□□□ -0.68
LMBR1-221ENST00000609774 CDK12Q9NYV4 1490 aaPredicted RBP10.8□□□□□ -0.68
LMBR1-221ENST00000609774 CFAP65Q6ZU64 1925 aaKnown RBP10.8□□□□□ -0.68
LMBR1-221ENST00000609774 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
LMBR1-221ENST00000609774 PIK3C2BO00750 1634 aa10.79□□□□□ -0.68
LMBR1-221ENST00000609774 COL16A1Q07092 1604 aaPredicted RBP10.79□□□□□ -0.68
LMBR1-221ENST00000609774 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
LMBR1-221ENST00000609774 SPATA31A6Q5VVP1 1343 aa10.78□□□□□ -0.68
LMBR1-221ENST00000609774 PHLPP1O60346 1717 aa10.78□□□□□ -0.68
LMBR1-221ENST00000609774 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
LMBR1-221ENST00000609774 LMTK2Q8IWU2 1503 aa10.77□□□□□ -0.69
LMBR1-221ENST00000609774 ZNF772Q68DY9 489 aaPredicted RBP10.76□□□□□ -0.69
LMBR1-221ENST00000609774 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
LMBR1-221ENST00000609774 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
LMBR1-221ENST00000609774 CHD2O14647 1828 aaKnown RBP10.76□□□□□ -0.69
LMBR1-221ENST00000609774 SHPRHQ149N8 1683 aa10.76□□□□□ -0.69
LMBR1-221ENST00000609774 ERBINQ96RT1 1412 aa10.75□□□□□ -0.69
LMBR1-221ENST00000609774 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
LMBR1-221ENST00000609774 AHDC1Q5TGY3 1603 aaPredicted RBP10.75□□□□□ -0.69
LMBR1-221ENST00000609774 MSH6P52701 1360 aa10.75□□□□□ -0.69
LMBR1-221ENST00000609774 LRP6O75581 1613 aa10.74□□□□□ -0.69
LMBR1-221ENST00000609774 TIMELESSQ9UNS1 1208 aa10.74□□□□□ -0.69
LMBR1-221ENST00000609774 PROSER2Q86WR7 435 aaPredicted RBP10.73□□□□□ -0.69
LMBR1-221ENST00000609774 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
LMBR1-221ENST00000609774 NOS1P29475 1434 aa10.73□□□□□ -0.69
LMBR1-221ENST00000609774 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
LMBR1-221ENST00000609774 ADGRB3O60242 1522 aa10.71□□□□□ -0.69
LMBR1-221ENST00000609774 IDI1Q13907 227 aa10.71□□□□□ -0.69
LMBR1-221ENST00000609774 MYOM3Q5VTT5 1437 aa10.71□□□□□ -0.69
LMBR1-221ENST00000609774 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
LMBR1-221ENST00000609774 DIP2AQ14689 1571 aa10.7□□□□□ -0.7
LMBR1-221ENST00000609774 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
LMBR1-221ENST00000609774 SLC52A1Q9NWF4 448 aa10.7□□□□□ -0.7
LMBR1-221ENST00000609774 ZFYVE9O95405 1425 aa10.69□□□□□ -0.7
LMBR1-221ENST00000609774 PLEKHG1Q9ULL1 1385 aa10.69□□□□□ -0.7
LMBR1-221ENST00000609774 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
LMBR1-221ENST00000609774 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
LMBR1-221ENST00000609774 PIK3R4Q99570 1358 aa10.68□□□□□ -0.7
LMBR1-221ENST00000609774 RXRBP28702 533 aa10.68□□□□□ -0.7
LMBR1-221ENST00000609774 SLC26A8Q96RN1 970 aa10.68□□□□□ -0.7
LMBR1-221ENST00000609774 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms