RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 NCOA2Q15596 1464 aa12.79□□□□□ -0.36
LINC00347-204ENST00000596240 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
LINC00347-204ENST00000596240 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
LINC00347-204ENST00000596240 MKRN3Q13064 507 aaKnown RBP12.79□□□□□ -0.36
LINC00347-204ENST00000596240 MLECQ14165 292 aa12.78□□□□□ -0.36
LINC00347-204ENST00000596240 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
LINC00347-204ENST00000596240 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
LINC00347-204ENST00000596240 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
LINC00347-204ENST00000596240 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.36
LINC00347-204ENST00000596240 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
LINC00347-204ENST00000596240 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
LINC00347-204ENST00000596240 SETD1BQ9UPS6 1966 aaKnown RBP12.76□□□□□ -0.37
LINC00347-204ENST00000596240 SEC24BO95487 1268 aa12.76□□□□□ -0.37
LINC00347-204ENST00000596240 PDCD7Q8N8D1 485 aaKnown RBP12.76□□□□□ -0.37
LINC00347-204ENST00000596240 ZNF142P52746 1687 aaPredicted RBP12.75□□□□□ -0.37
LINC00347-204ENST00000596240 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
LINC00347-204ENST00000596240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00347-204ENST00000596240 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
LINC00347-204ENST00000596240 LHX8Q68G74 356 aa12.74□□□□□ -0.37
LINC00347-204ENST00000596240 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
LINC00347-204ENST00000596240 A2MP01023 1474 aa12.73□□□□□ -0.37
LINC00347-204ENST00000596240 PLCG2P16885 1265 aa12.73□□□□□ -0.37
LINC00347-204ENST00000596240 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
LINC00347-204ENST00000596240 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
LINC00347-204ENST00000596240 OCEL1Q9H607 264 aa12.73□□□□□ -0.37
LINC00347-204ENST00000596240 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
LINC00347-204ENST00000596240 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
LINC00347-204ENST00000596240 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
LINC00347-204ENST00000596240 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
LINC00347-204ENST00000596240 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
LINC00347-204ENST00000596240 CROCC2H7BZ55 1655 aa12.72□□□□□ -0.37
LINC00347-204ENST00000596240 HNRNPMP52272 730 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00347-204ENST00000596240 HSPA2P54652 639 aa12.71□□□□□ -0.37
LINC00347-204ENST00000596240 SPAG9O60271 1321 aaKnown RBP12.7□□□□□ -0.38
LINC00347-204ENST00000596240 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
LINC00347-204ENST00000596240 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
LINC00347-204ENST00000596240 MS4A4AQ96JQ5 239 aa12.7□□□□□ -0.38
LINC00347-204ENST00000596240 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
LINC00347-204ENST00000596240 CNTLNQ9NXG0 1405 aa12.7□□□□□ -0.38
LINC00347-204ENST00000596240 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
LINC00347-204ENST00000596240 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
LINC00347-204ENST00000596240 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
LINC00347-204ENST00000596240 UHRF1BP1Q6BDS2 1440 aa12.69□□□□□ -0.38
LINC00347-204ENST00000596240 RNF17Q9BXT8 1623 aaKnown RBP12.68□□□□□ -0.38
LINC00347-204ENST00000596240 FBXO22Q8NEZ5 403 aa12.67□□□□□ -0.38
LINC00347-204ENST00000596240 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
LINC00347-204ENST00000596240 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
LINC00347-204ENST00000596240 SOX12O15370 315 aa12.66□□□□□ -0.38
LINC00347-204ENST00000596240 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.38
LINC00347-204ENST00000596240 NPATQ14207 1427 aa12.65□□□□□ -0.38
LINC00347-204ENST00000596240 FAM135AQ9P2D6 1515 aa12.65□□□□□ -0.38
LINC00347-204ENST00000596240 EIF2AK4Q9P2K8 1649 aaKnown RBP12.65□□□□□ -0.38
LINC00347-204ENST00000596240 KDM5DQ9BY66 1539 aa12.64□□□□□ -0.39
LINC00347-204ENST00000596240 MYOM3Q5VTT5 1437 aa12.63□□□□□ -0.39
LINC00347-204ENST00000596240 ZC3H13Q5T200 1668 aaKnown RBP12.63□□□□□ -0.39
LINC00347-204ENST00000596240 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
LINC00347-204ENST00000596240 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
LINC00347-204ENST00000596240 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
LINC00347-204ENST00000596240 PTPN23Q9H3S7 1636 aa12.62□□□□□ -0.39
LINC00347-204ENST00000596240 CEP152O94986 1710 aa12.62□□□□□ -0.39
LINC00347-204ENST00000596240 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
LINC00347-204ENST00000596240 POLR1AO95602 1720 aaPredicted RBP12.61□□□□□ -0.39
LINC00347-204ENST00000596240 DNMT1P26358 1616 aaKnown RBP12.61□□□□□ -0.39
LINC00347-204ENST00000596240 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
LINC00347-204ENST00000596240 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
LINC00347-204ENST00000596240 DHX29Q7Z478 1369 aaKnown RBP12.6□□□□□ -0.39
LINC00347-204ENST00000596240 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
LINC00347-204ENST00000596240 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
LINC00347-204ENST00000596240 NLRP6P59044 892 aa12.59□□□□□ -0.39
LINC00347-204ENST00000596240 PZPP20742 1482 aa12.59□□□□□ -0.39
LINC00347-204ENST00000596240 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
LINC00347-204ENST00000596240 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
LINC00347-204ENST00000596240 ABCC3O15438 1527 aa12.58□□□□□ -0.4
LINC00347-204ENST00000596240 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
LINC00347-204ENST00000596240 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
LINC00347-204ENST00000596240 PLA2R1Q13018 1463 aa12.57□□□□□ -0.4
LINC00347-204ENST00000596240 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
LINC00347-204ENST00000596240 PTPRTO14522 1441 aa12.56□□□□□ -0.4
LINC00347-204ENST00000596240 PPP1R37O75864 691 aa12.56□□□□□ -0.4
LINC00347-204ENST00000596240 HRCP23327 699 aa12.55□□□□□ -0.4
LINC00347-204ENST00000596240 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
LINC00347-204ENST00000596240 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
LINC00347-204ENST00000596240 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
LINC00347-204ENST00000596240 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
LINC00347-204ENST00000596240 ESF1Q9H501 851 aaKnown RBP12.54□□□□□ -0.4
LINC00347-204ENST00000596240 SPATA31D1Q6ZQQ2 1576 aa12.54□□□□□ -0.4
LINC00347-204ENST00000596240 GGT6Q6P531 493 aa12.53□□□□□ -0.4
LINC00347-204ENST00000596240 ABCC5O15440 1437 aa12.53□□□□□ -0.4
LINC00347-204ENST00000596240 ZEB1P37275 1124 aaPredicted RBP12.52□□□□□ -0.41
LINC00347-204ENST00000596240 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
LINC00347-204ENST00000596240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00347-204ENST00000596240 DAPK1P53355 1430 aa12.52□□□□□ -0.41
LINC00347-204ENST00000596240 CFAP65Q6ZU64 1925 aaKnown RBP12.51□□□□□ -0.41
LINC00347-204ENST00000596240 KIF3BO15066 747 aa12.5□□□□□ -0.41
LINC00347-204ENST00000596240 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
LINC00347-204ENST00000596240 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
LINC00347-204ENST00000596240 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
LINC00347-204ENST00000596240 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
LINC00347-204ENST00000596240 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
LINC00347-204ENST00000596240 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms