RNA–Protein interactions for RNA: ENST00000595369.1

SH2D3A-203, Transcript of SH2 domain containing 3A, humanhuman

TSL 2

Gene SH2D3A, Length 3,493 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-203ENST00000595369 ERBINQ96RT1 1412 aa11.71□□□□□ -0.53
SH2D3A-203ENST00000595369 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.53
SH2D3A-203ENST00000595369 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.54
SH2D3A-203ENST00000595369 PLA2R1Q13018 1463 aa11.71□□□□□ -0.54
SH2D3A-203ENST00000595369 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
SH2D3A-203ENST00000595369 GZF1Q9H116 711 aaPredicted RBP11.7□□□□□ -0.54
SH2D3A-203ENST00000595369 CENPQQ7L2Z9 268 aaPredicted RBP11.7□□□□□ -0.54
SH2D3A-203ENST00000595369 POGKQ9P215 609 aa11.7□□□□□ -0.54
SH2D3A-203ENST00000595369 ABCA8O94911 1581 aa11.7□□□□□ -0.54
SH2D3A-203ENST00000595369 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
SH2D3A-203ENST00000595369 A2MP01023 1474 aa11.68□□□□□ -0.54
SH2D3A-203ENST00000595369 MAGI2Q86UL8 1455 aa11.68□□□□□ -0.54
SH2D3A-203ENST00000595369 PLPPR3Q6T4P5 718 aa11.68□□□□□ -0.54
SH2D3A-203ENST00000595369 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
SH2D3A-203ENST00000595369 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
SH2D3A-203ENST00000595369 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
SH2D3A-203ENST00000595369 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
SH2D3A-203ENST00000595369 PTPRGP23470 1445 aa11.67□□□□□ -0.54
SH2D3A-203ENST00000595369 ABCC2Q92887 1545 aa11.66□□□□□ -0.54
SH2D3A-203ENST00000595369 NEURL4Q96JN8 1562 aa11.66□□□□□ -0.54
SH2D3A-203ENST00000595369 RLBP1P12271 317 aa11.66□□□□□ -0.54
SH2D3A-203ENST00000595369 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
SH2D3A-203ENST00000595369 MAP3K4Q9Y6R4 1608 aa11.66□□□□□ -0.54
SH2D3A-203ENST00000595369 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
SH2D3A-203ENST00000595369 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
SH2D3A-203ENST00000595369 PPRC1Q5VV67 1664 aaKnown RBP11.64□□□□□ -0.55
SH2D3A-203ENST00000595369 KIF3BO15066 747 aa11.63□□□□□ -0.55
SH2D3A-203ENST00000595369 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.63□□□□□ -0.55
SH2D3A-203ENST00000595369 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
SH2D3A-203ENST00000595369 DIP2BQ9P265 1576 aa11.63□□□□□ -0.55
SH2D3A-203ENST00000595369 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
SH2D3A-203ENST00000595369 ADGRF5Q8IZF2 1346 aa11.62□□□□□ -0.55
SH2D3A-203ENST00000595369 MAST1Q9Y2H9 1570 aa11.62□□□□□ -0.55
SH2D3A-203ENST00000595369 ARHGEF12Q9NZN5 1544 aa11.62□□□□□ -0.55
SH2D3A-203ENST00000595369 TSR2Q969E8 191 aaKnown RBP11.62□□□□□ -0.55
SH2D3A-203ENST00000595369 ABCC10Q5T3U5 1492 aa11.61□□□□□ -0.55
SH2D3A-203ENST00000595369 FBLN1P23142 703 aa11.61□□□□□ -0.55
SH2D3A-203ENST00000595369 REREQ9P2R6 1566 aa11.61□□□□□ -0.55
SH2D3A-203ENST00000595369 USP19O94966 1318 aa11.61□□□□□ -0.55
SH2D3A-203ENST00000595369 WWC1Q8IX03 1113 aa11.61□□□□□ -0.55
SH2D3A-203ENST00000595369 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 CFAP74Q9C0B2 1584 aa11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 SYCP2Q9BX26 1530 aa11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 CENPJQ9HC77 1338 aaPredicted RBP11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
SH2D3A-203ENST00000595369 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
SH2D3A-203ENST00000595369 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
SH2D3A-203ENST00000595369 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
SH2D3A-203ENST00000595369 ZCCHC11Q5TAX3 1644 aaKnown RBP11.58□□□□□ -0.55
SH2D3A-203ENST00000595369 ERCC6L2Q5T890 1561 aa11.58□□□□□ -0.56
SH2D3A-203ENST00000595369 ZMYM4Q5VZL5 1548 aa11.58□□□□□ -0.56
SH2D3A-203ENST00000595369 MFAP1P55081 439 aaKnown RBP11.58□□□□□ -0.56
SH2D3A-203ENST00000595369 ADGBQ8N7X0 1667 aa11.58□□□□□ -0.56
SH2D3A-203ENST00000595369 STK26Q9P289 416 aa11.58□□□□□ -0.56
SH2D3A-203ENST00000595369 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
SH2D3A-203ENST00000595369 E9PCH4 1651 aa11.57□□□□□ -0.56
SH2D3A-203ENST00000595369 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
SH2D3A-203ENST00000595369 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
SH2D3A-203ENST00000595369 MTHFSP49914 203 aa11.57□□□□□ -0.56
SH2D3A-203ENST00000595369 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
SH2D3A-203ENST00000595369 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
SH2D3A-203ENST00000595369 U2AF1L5P0DN76 240 aaPredicted RBP11.56□□□□□ -0.56
SH2D3A-203ENST00000595369 U2AF1Q01081 240 aaKnown RBP eCLIP11.56□□□□□ -0.56
SH2D3A-203ENST00000595369 GGT6Q6P531 493 aa11.56□□□□□ -0.56
SH2D3A-203ENST00000595369 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
SH2D3A-203ENST00000595369 E9PSI1 815 aa11.56□□□□□ -0.56
SH2D3A-203ENST00000595369 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
SH2D3A-203ENST00000595369 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
SH2D3A-203ENST00000595369 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
SH2D3A-203ENST00000595369 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
SH2D3A-203ENST00000595369 GPRASP1Q5JY77 1395 aa11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 ELL2O00472 640 aaPredicted RBP11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 EFCAB2Q5VUJ9 269 aa11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
SH2D3A-203ENST00000595369 DEPDC5O75140 1603 aa11.53□□□□□ -0.56
SH2D3A-203ENST00000595369 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
SH2D3A-203ENST00000595369 KDM5AP29375 1690 aaKnown RBP11.53□□□□□ -0.56
SH2D3A-203ENST00000595369 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
SH2D3A-203ENST00000595369 TRPM1Q7Z4N2 1603 aa11.53□□□□□ -0.56
SH2D3A-203ENST00000595369 FAM43AQ8N2R8 423 aa11.52□□□□□ -0.56
SH2D3A-203ENST00000595369 BECN1Q14457 450 aa11.52□□□□□ -0.57
SH2D3A-203ENST00000595369 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
SH2D3A-203ENST00000595369 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 RSPH4AQ5TD94 716 aa11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 ITPRIPQ8IWB1 547 aa11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 FTSJ3Q8IY81 847 aaKnown RBP11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 UGGT1Q9NYU2 1555 aa11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 CDCA8Q53HL2 280 aa11.51□□□□□ -0.57
SH2D3A-203ENST00000595369 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
SH2D3A-203ENST00000595369 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
SH2D3A-203ENST00000595369 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
SH2D3A-203ENST00000595369 SHANK2Q9UPX8 1470 aa11.49□□□□□ -0.57
SH2D3A-203ENST00000595369 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms