RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	MPHOSPH9	Q99550	1183 aa		12.55	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	PDE4A	P27815	886 aa		12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	FOXD1	Q16676	465 aa		12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	FAM43A	Q8N2R8	423 aa		12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	FRAT1	Q92837	279 aa	Predicted RBP	12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	NUDC	Q9Y266	331 aa		12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	RERE	Q9P2R6	1566 aa		12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	GSE1	Q14687	1217 aa		12.54	□□□□□ -0.4
CACNA2D4-223	ENST00000588077	POLR3GL	Q9BT43	218 aa		12.52	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	SMG6	Q86US8	1419 aa	Known RBP	12.51	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	EXOC6	Q8TAG9	804 aa		12.51	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.51	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	SIGLEC1	Q9BZZ2	1709 aa		12.5	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	ZMYM3	Q14202	1370 aa		12.5	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	PPM1G	O15355	546 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.5	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	RRP9	O43818	475 aa	Known RBP	12.5	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	NFKBIB	Q15653	356 aa		12.5	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	KDM4F	A0A1W2PPD8	638 aa		12.49	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	CCDC7	Q96M83	1385 aa		12.49	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	HSP90AA1	P07900	732 aa	Known RBP	12.49	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	CHGA	P10645	457 aa	Known RBP	12.49	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	BACH2	Q9BYV9	841 aa		12.48	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	RNF123	Q5XPI4	1314 aa		12.48	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	FAM135A	Q9P2D6	1515 aa		12.47	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	STAG3	Q9UJ98	1225 aa		12.47	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	KDM5D	Q9BY66	1539 aa		12.47	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	ABCC3	O15438	1527 aa		12.46	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	BCORL1	Q5H9F3	1711 aa		12.46	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	PRDM15	P57071	1507 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	RNF17	Q9BXT8	1623 aa	Known RBP	12.46	□□□□□ -0.41
CACNA2D4-223	ENST00000588077	DCAF11	Q8TEB1	546 aa		12.45	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	MADD	Q8WXG6	1647 aa		12.45	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	PZP	P20742	1482 aa		12.45	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	UNC13B	O14795	1591 aa		12.45	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	TCERG1	O14776	1098 aa	Known RBP	12.45	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	MROH1	Q8NDA8	1641 aa		12.45	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	CLTC	Q00610	1675 aa	Known RBP	12.44	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	L3MBTL2	Q969R5	705 aa		12.44	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	KIF7	Q2M1P5	1343 aa		12.44	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	NPAT	Q14207	1427 aa		12.43	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	DEPDC5	O75140	1603 aa		12.43	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	RIMS1	Q86UR5	1692 aa	Known RBP	12.43	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	CEP152	O94986	1710 aa		12.43	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	FER1L4	A9Z1Z3	1794 aa		12.42	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	PTPRM	P28827	1452 aa		12.42	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	CFAP65	Q6ZU64	1925 aa	Known RBP	12.41	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	IQGAP3	Q86VI3	1631 aa		12.41	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	TNR	Q92752	1358 aa		12.41	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	FRAT2	O75474	233 aa	Predicted RBP	12.41	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	RRP1	P56182	461 aa	Known RBP	12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	NBPF8	Q3BBV2	869 aa		12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	ADAMTSL3	P82987	1691 aa		12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	RGL3	Q3MIN7	710 aa		12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	KLHL34	Q8N239	644 aa		12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	VWDE	Q8N2E2	1590 aa		12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	ZNF326	Q5BKZ1	582 aa	Known RBP	12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	TAF7L	Q5H9L4	462 aa		12.4	□□□□□ -0.42
CACNA2D4-223	ENST00000588077	EFCAB6	Q5THR3	1501 aa		12.39	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	LMTK2	Q8IWU2	1503 aa		12.39	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	IDI1	Q13907	227 aa		12.39	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	PLIN1	O60240	522 aa		12.39	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	ARHGAP31	Q2M1Z3	1444 aa		12.39	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	SLC52A1	Q9NWF4	448 aa		12.39	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	TET3	O43151	1660 aa		12.38	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	CAMSAP1	Q5T5Y3	1602 aa		12.38	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	CCDC144A	A2RUR9	1427 aa		12.38	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	ZC3H13	Q5T200	1668 aa	Known RBP	12.38	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	SENP3	Q9H4L4	574 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	ARX	Q96QS3	562 aa		12.37	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	ERVK-7	P63135	1459 aa		12.37	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	RPRD2	Q5VT52	1461 aa	Known RBP	12.37	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	ANKRD30B	Q9BXX2	1392 aa		12.37	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	TMC1	Q8TDI8	760 aa		12.36	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	RGS3	P49796	1198 aa		12.36	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	DDRGK1	Q96HY6	314 aa		12.35	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	RCAN3	Q9UKA8	241 aa		12.35	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.35	□□□□□ -0.43
CACNA2D4-223	ENST00000588077		E9PCH4	1651 aa		12.34	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	PNISR	Q8TF01	805 aa	Known RBP	12.34	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	MS4A1	P11836	297 aa		12.34	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.34	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	PNN	Q9H307	717 aa	Known RBP	12.34	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	C3	P01024	1663 aa		12.34	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	NOS1	P29475	1434 aa		12.33	□□□□□ -0.43
CACNA2D4-223	ENST00000588077	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.33	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	KDM2A	Q9Y2K7	1162 aa		12.33	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	UHRF1BP1	Q6BDS2	1440 aa		12.33	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	HSPA2	P54652	639 aa		12.33	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	PLA2R1	Q13018	1463 aa		12.32	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	UGGT1	Q9NYU2	1555 aa		12.32	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	MROH2A	A6NES4	1674 aa		12.32	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	PTPRT	O14522	1441 aa		12.32	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	BBX	Q8WY36	941 aa	Predicted RBP	12.32	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	CDCA7L	Q96GN5	454 aa		12.31	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.31	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	POGK	Q9P215	609 aa		12.31	□□□□□ -0.44
CACNA2D4-223	ENST00000588077	PREX1	Q8TCU6	1659 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms