RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 FAM50AQ14320 339 aaKnown RBP12.83□□□□□ -0.36
NEDD4L-218ENST00000587547 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
NEDD4L-218ENST00000587547 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
NEDD4L-218ENST00000587547 ARHGAP23Q9P227 1491 aa12.83□□□□□ -0.36
NEDD4L-218ENST00000587547 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
NEDD4L-218ENST00000587547 ABCC3O15438 1527 aa12.83□□□□□ -0.36
NEDD4L-218ENST00000587547 UBR1Q8IWV7 1749 aa12.82□□□□□ -0.36
NEDD4L-218ENST00000587547 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
NEDD4L-218ENST00000587547 LRP6O75581 1613 aa12.81□□□□□ -0.36
NEDD4L-218ENST00000587547 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
NEDD4L-218ENST00000587547 JCADQ9P266 1359 aa12.81□□□□□ -0.36
NEDD4L-218ENST00000587547 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
NEDD4L-218ENST00000587547 SLIT1O75093 1534 aa12.8□□□□□ -0.36
NEDD4L-218ENST00000587547 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
NEDD4L-218ENST00000587547 ARHGEF5Q12774 1597 aa12.78□□□□□ -0.36
NEDD4L-218ENST00000587547 PHLPP1O60346 1717 aa12.77□□□□□ -0.36
NEDD4L-218ENST00000587547 ITGAEP38570 1179 aa12.77□□□□□ -0.37
NEDD4L-218ENST00000587547 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-218ENST00000587547 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-218ENST00000587547 KCNA6P17658 529 aa12.75□□□□□ -0.37
NEDD4L-218ENST00000587547 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-218ENST00000587547 ZNF772Q68DY9 489 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-218ENST00000587547 MROH1Q8NDA8 1641 aa12.74□□□□□ -0.37
NEDD4L-218ENST00000587547 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-218ENST00000587547 DAPK1P53355 1430 aa12.74□□□□□ -0.37
NEDD4L-218ENST00000587547 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
NEDD4L-218ENST00000587547 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
NEDD4L-218ENST00000587547 EID1Q9Y6B2 187 aa12.74□□□□□ -0.37
NEDD4L-218ENST00000587547 TMEM2Q9UHN6 1383 aa12.73□□□□□ -0.37
NEDD4L-218ENST00000587547 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
NEDD4L-218ENST00000587547 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 ABCC5O15440 1437 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 MSH6P52701 1360 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 CEP152O94986 1710 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 RXRBP28702 533 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
NEDD4L-218ENST00000587547 SPATA31A6Q5VVP1 1343 aa12.71□□□□□ -0.37
NEDD4L-218ENST00000587547 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
NEDD4L-218ENST00000587547 MAST1Q9Y2H9 1570 aa12.71□□□□□ -0.37
NEDD4L-218ENST00000587547 NKTRP30414 1462 aaKnown RBP12.71□□□□□ -0.38
NEDD4L-218ENST00000587547 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
NEDD4L-218ENST00000587547 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
NEDD4L-218ENST00000587547 CHIC2Q9UKJ5 165 aa12.7□□□□□ -0.38
NEDD4L-218ENST00000587547 CDK12Q9NYV4 1490 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-218ENST00000587547 TET3O43151 1660 aa12.7□□□□□ -0.38
NEDD4L-218ENST00000587547 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
NEDD4L-218ENST00000587547 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
NEDD4L-218ENST00000587547 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
NEDD4L-218ENST00000587547 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
NEDD4L-218ENST00000587547 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
NEDD4L-218ENST00000587547 EIF2AK4Q9P2K8 1649 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-218ENST00000587547 RGS12O14924 1447 aa12.67□□□□□ -0.38
NEDD4L-218ENST00000587547 ARHGAP31Q2M1Z3 1444 aa12.67□□□□□ -0.38
NEDD4L-218ENST00000587547 EFCAB6Q5THR3 1501 aa12.66□□□□□ -0.38
NEDD4L-218ENST00000587547 AFF2P51816 1311 aa12.65□□□□□ -0.38
NEDD4L-218ENST00000587547 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
NEDD4L-218ENST00000587547 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
NEDD4L-218ENST00000587547 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
NEDD4L-218ENST00000587547 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 ANKRD30AQ9BXX3 1397 aa12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
NEDD4L-218ENST00000587547 IDI1Q13907 227 aa12.63□□□□□ -0.39
NEDD4L-218ENST00000587547 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
NEDD4L-218ENST00000587547 SETBP1Q9Y6X0 1596 aa12.62□□□□□ -0.39
NEDD4L-218ENST00000587547 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
NEDD4L-218ENST00000587547 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
NEDD4L-218ENST00000587547 KIF15Q9NS87 1388 aa12.61□□□□□ -0.39
NEDD4L-218ENST00000587547 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
NEDD4L-218ENST00000587547 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
NEDD4L-218ENST00000587547 BCANQ96GW7 911 aa12.6□□□□□ -0.39
NEDD4L-218ENST00000587547 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
NEDD4L-218ENST00000587547 ADGRB3O60242 1522 aa12.58□□□□□ -0.4
NEDD4L-218ENST00000587547 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-218ENST00000587547 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
NEDD4L-218ENST00000587547 QTRT2Q9H974 415 aaKnown RBP12.58□□□□□ -0.4
NEDD4L-218ENST00000587547 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
NEDD4L-218ENST00000587547 HFM1A2PYH4 1435 aa12.57□□□□□ -0.4
NEDD4L-218ENST00000587547 NAIPQ13075 1403 aa12.57□□□□□ -0.4
NEDD4L-218ENST00000587547 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
NEDD4L-218ENST00000587547 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
NEDD4L-218ENST00000587547 C8orf37Q96NL8 207 aa12.57□□□□□ -0.4
NEDD4L-218ENST00000587547 CHD2O14647 1828 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-218ENST00000587547 NCOA3Q9Y6Q9 1424 aa12.56□□□□□ -0.4
NEDD4L-218ENST00000587547 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
NEDD4L-218ENST00000587547 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-218ENST00000587547 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
NEDD4L-218ENST00000587547 ZFYVE9O95405 1425 aa12.55□□□□□ -0.4
NEDD4L-218ENST00000587547 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
NEDD4L-218ENST00000587547 PLEKHG1Q9ULL1 1385 aa12.55□□□□□ -0.4
NEDD4L-218ENST00000587547 NOS1P29475 1434 aa12.54□□□□□ -0.4
NEDD4L-218ENST00000587547 ERBINQ96RT1 1412 aa12.54□□□□□ -0.4
NEDD4L-218ENST00000587547 SETD5Q9C0A6 1442 aa12.54□□□□□ -0.4
NEDD4L-218ENST00000587547 ATF3P18847 181 aa12.54□□□□□ -0.4
NEDD4L-218ENST00000587547 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms