RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMCHD1-210ENST00000583800 CPS1P31327 1500 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 NLRP1Q9C000 1473 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 DEPDC5O75140 1603 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 MROH1Q8NDA8 1641 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 VPS8Q8N3P4 1428 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 ABCC3O15438 1527 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 IQGAP1P46940 1657 aa12.42□□□□□ -0.42
SMCHD1-210ENST00000583800 SHANK2Q9UPX8 1470 aa12.41□□□□□ -0.42
SMCHD1-210ENST00000583800 MIA2Q96PC5 1412 aa12.41□□□□□ -0.42
SMCHD1-210ENST00000583800 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
SMCHD1-210ENST00000583800 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
SMCHD1-210ENST00000583800 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
SMCHD1-210ENST00000583800 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
SMCHD1-210ENST00000583800 NPHP4O75161 1426 aaPredicted RBP12.39□□□□□ -0.43
SMCHD1-210ENST00000583800 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
SMCHD1-210ENST00000583800 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
SMCHD1-210ENST00000583800 MED14O60244 1454 aa12.39□□□□□ -0.43
SMCHD1-210ENST00000583800 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
SMCHD1-210ENST00000583800 UBR1Q8IWV7 1749 aa12.38□□□□□ -0.43
SMCHD1-210ENST00000583800 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
SMCHD1-210ENST00000583800 ANKLE2Q86XL3 938 aa12.38□□□□□ -0.43
SMCHD1-210ENST00000583800 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
SMCHD1-210ENST00000583800 MED1Q15648 1581 aaPredicted RBP12.38□□□□□ -0.43
SMCHD1-210ENST00000583800 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
SMCHD1-210ENST00000583800 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
SMCHD1-210ENST00000583800 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
SMCHD1-210ENST00000583800 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
SMCHD1-210ENST00000583800 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
SMCHD1-210ENST00000583800 MAP3K1Q13233 1512 aa12.36□□□□□ -0.43
SMCHD1-210ENST00000583800 SYNMO15061 1565 aa12.35□□□□□ -0.43
SMCHD1-210ENST00000583800 LOC105371045A0A1W2PR82 267 aa12.35□□□□□ -0.43
SMCHD1-210ENST00000583800 HSPA1LP34931 641 aa12.35□□□□□ -0.43
SMCHD1-210ENST00000583800 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
SMCHD1-210ENST00000583800 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
SMCHD1-210ENST00000583800 TOM1O60784 492 aa12.34□□□□□ -0.43
SMCHD1-210ENST00000583800 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.44
SMCHD1-210ENST00000583800 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
SMCHD1-210ENST00000583800 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
SMCHD1-210ENST00000583800 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
SMCHD1-210ENST00000583800 XIRP1Q702N8 1843 aaKnown RBP12.31□□□□□ -0.44
SMCHD1-210ENST00000583800 PIK3C2BO00750 1634 aa12.3□□□□□ -0.44
SMCHD1-210ENST00000583800 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
SMCHD1-210ENST00000583800 ABCC5O15440 1437 aa12.29□□□□□ -0.44
SMCHD1-210ENST00000583800 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
SMCHD1-210ENST00000583800 SCAF11Q99590 1463 aaKnown RBP12.29□□□□□ -0.44
SMCHD1-210ENST00000583800 SLIT1O75093 1534 aa12.29□□□□□ -0.44
SMCHD1-210ENST00000583800 ARHGAP23Q9P227 1491 aa12.28□□□□□ -0.44
SMCHD1-210ENST00000583800 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
SMCHD1-210ENST00000583800 DAPK1P53355 1430 aa12.27□□□□□ -0.45
SMCHD1-210ENST00000583800 RRP7BPQ9NSQ0 103 aa12.26□□□□□ -0.45
SMCHD1-210ENST00000583800 POTEMA6NI47 508 aa12.25□□□□□ -0.45
SMCHD1-210ENST00000583800 LTKP29376 864 aa12.25□□□□□ -0.45
SMCHD1-210ENST00000583800 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
SMCHD1-210ENST00000583800 FGD6Q6ZV73 1430 aa12.24□□□□□ -0.45
SMCHD1-210ENST00000583800 LMTK2Q8IWU2 1503 aa12.23□□□□□ -0.45
SMCHD1-210ENST00000583800 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
SMCHD1-210ENST00000583800 EFCAB6Q5THR3 1501 aa12.22□□□□□ -0.45
SMCHD1-210ENST00000583800 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
SMCHD1-210ENST00000583800 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
SMCHD1-210ENST00000583800 KANK1Q14678 1352 aa12.21□□□□□ -0.45
SMCHD1-210ENST00000583800 TMEM2Q9UHN6 1383 aa12.21□□□□□ -0.45
SMCHD1-210ENST00000583800 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
SMCHD1-210ENST00000583800 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
SMCHD1-210ENST00000583800 ANKRD30AQ9BXX3 1397 aa12.2□□□□□ -0.46
SMCHD1-210ENST00000583800 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
SMCHD1-210ENST00000583800 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
SMCHD1-210ENST00000583800 CHIC2Q9UKJ5 165 aa12.2□□□□□ -0.46
SMCHD1-210ENST00000583800 EID1Q9Y6B2 187 aa12.2□□□□□ -0.46
SMCHD1-210ENST00000583800 ADGRB3O60242 1522 aa12.2□□□□□ -0.46
SMCHD1-210ENST00000583800 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
SMCHD1-210ENST00000583800 TET3O43151 1660 aa12.18□□□□□ -0.46
SMCHD1-210ENST00000583800 GCC2Q8IWJ2 1684 aa12.18□□□□□ -0.46
SMCHD1-210ENST00000583800 NOS1P29475 1434 aa12.18□□□□□ -0.46
SMCHD1-210ENST00000583800 ROBO1Q9Y6N7 1651 aa12.17□□□□□ -0.46
SMCHD1-210ENST00000583800 ADGRL2O95490 1459 aa12.17□□□□□ -0.46
SMCHD1-210ENST00000583800 C7P10643 843 aa12.17□□□□□ -0.46
SMCHD1-210ENST00000583800 IDI1Q13907 227 aa12.17□□□□□ -0.46
SMCHD1-210ENST00000583800 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
SMCHD1-210ENST00000583800 NWD1Q149M9 1564 aa12.17□□□□□ -0.46
SMCHD1-210ENST00000583800 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
SMCHD1-210ENST00000583800 TMEM94Q12767 1356 aa12.16□□□□□ -0.46
SMCHD1-210ENST00000583800 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
SMCHD1-210ENST00000583800 SLC26A8Q96RN1 970 aa12.14□□□□□ -0.47
SMCHD1-210ENST00000583800 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
SMCHD1-210ENST00000583800 CHD2O14647 1828 aaKnown RBP12.14□□□□□ -0.47
SMCHD1-210ENST00000583800 FAM135BQ49AJ0 1406 aa12.13□□□□□ -0.47
SMCHD1-210ENST00000583800 KCNA6P17658 529 aa12.13□□□□□ -0.47
SMCHD1-210ENST00000583800 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
SMCHD1-210ENST00000583800 TMEM131LA2VDJ0 1609 aa12.12□□□□□ -0.47
SMCHD1-210ENST00000583800 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
SMCHD1-210ENST00000583800 RGS17Q9UGC6 210 aaPredicted RBP12.12□□□□□ -0.47
SMCHD1-210ENST00000583800 RPRD2Q5VT52 1461 aaKnown RBP12.12□□□□□ -0.47
SMCHD1-210ENST00000583800 UNC13BO14795 1591 aa12.12□□□□□ -0.47
SMCHD1-210ENST00000583800 E9PCH4 1651 aa12.11□□□□□ -0.47
SMCHD1-210ENST00000583800 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
SMCHD1-210ENST00000583800 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
SMCHD1-210ENST00000583800 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
SMCHD1-210ENST00000583800 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms