RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 CDC42BPAQ5VT25 1732 aa12.96□□□□□ -0.34
SUPT4H1-206ENST00000581204 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.34
SUPT4H1-206ENST00000581204 STK25O00506 426 aa12.95□□□□□ -0.34
SUPT4H1-206ENST00000581204 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
SUPT4H1-206ENST00000581204 ZC3H13Q5T200 1668 aaKnown RBP12.95□□□□□ -0.34
SUPT4H1-206ENST00000581204 TNRQ92752 1358 aa12.94□□□□□ -0.34
SUPT4H1-206ENST00000581204 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
SUPT4H1-206ENST00000581204 FAM135BQ49AJ0 1406 aa12.93□□□□□ -0.34
SUPT4H1-206ENST00000581204 PZPP20742 1482 aa12.92□□□□□ -0.34
SUPT4H1-206ENST00000581204 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
SUPT4H1-206ENST00000581204 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
SUPT4H1-206ENST00000581204 PYGBP11216 843 aa12.91□□□□□ -0.34
SUPT4H1-206ENST00000581204 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
SUPT4H1-206ENST00000581204 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
SUPT4H1-206ENST00000581204 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.34
SUPT4H1-206ENST00000581204 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
SUPT4H1-206ENST00000581204 GGT6Q6P531 493 aa12.9□□□□□ -0.34
SUPT4H1-206ENST00000581204 TSHZ2Q9NRE2 1034 aa12.9□□□□□ -0.34
SUPT4H1-206ENST00000581204 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
SUPT4H1-206ENST00000581204 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
SUPT4H1-206ENST00000581204 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
SUPT4H1-206ENST00000581204 SPAG9O60271 1321 aaKnown RBP12.89□□□□□ -0.35
SUPT4H1-206ENST00000581204 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
SUPT4H1-206ENST00000581204 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
SUPT4H1-206ENST00000581204 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
SUPT4H1-206ENST00000581204 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
SUPT4H1-206ENST00000581204 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
SUPT4H1-206ENST00000581204 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
SUPT4H1-206ENST00000581204 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
SUPT4H1-206ENST00000581204 CCDC18Q5T9S5 1454 aa12.86□□□□□ -0.35
SUPT4H1-206ENST00000581204 KDM5DQ9BY66 1539 aa12.86□□□□□ -0.35
SUPT4H1-206ENST00000581204 MIA2Q96PC5 1412 aa12.86□□□□□ -0.35
SUPT4H1-206ENST00000581204 LRP6O75581 1613 aa12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 KIAA1107Q9UPP5 1409 aa12.85□□□□□ -0.35
SUPT4H1-206ENST00000581204 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
SUPT4H1-206ENST00000581204 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
SUPT4H1-206ENST00000581204 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
SUPT4H1-206ENST00000581204 LRRC9Q6ZRR7 1453 aa12.84□□□□□ -0.35
SUPT4H1-206ENST00000581204 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.35
SUPT4H1-206ENST00000581204 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
SUPT4H1-206ENST00000581204 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
SUPT4H1-206ENST00000581204 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
SUPT4H1-206ENST00000581204 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
SUPT4H1-206ENST00000581204 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
SUPT4H1-206ENST00000581204 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
SUPT4H1-206ENST00000581204 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
SUPT4H1-206ENST00000581204 CDK12Q9NYV4 1490 aaPredicted RBP12.79□□□□□ -0.36
SUPT4H1-206ENST00000581204 ZNF777Q9ULD5 760 aaPredicted RBP12.79□□□□□ -0.36
SUPT4H1-206ENST00000581204 JCADQ9P266 1359 aa12.79□□□□□ -0.36
SUPT4H1-206ENST00000581204 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
SUPT4H1-206ENST00000581204 SCAF11Q99590 1463 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-206ENST00000581204 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
SUPT4H1-206ENST00000581204 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
SUPT4H1-206ENST00000581204 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
SUPT4H1-206ENST00000581204 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
SUPT4H1-206ENST00000581204 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-206ENST00000581204 DHX29Q7Z478 1369 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-206ENST00000581204 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
SUPT4H1-206ENST00000581204 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
SUPT4H1-206ENST00000581204 SLIT1O75093 1534 aa12.76□□□□□ -0.37
SUPT4H1-206ENST00000581204 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
SUPT4H1-206ENST00000581204 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
SUPT4H1-206ENST00000581204 SETBP1Q9Y6X0 1596 aa12.74□□□□□ -0.37
SUPT4H1-206ENST00000581204 RTEL1-TNFRSF6BF6WH68 1400 aa12.74□□□□□ -0.37
SUPT4H1-206ENST00000581204 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
SUPT4H1-206ENST00000581204 ERVK-7P63135 1459 aa12.73□□□□□ -0.37
SUPT4H1-206ENST00000581204 LTKP29376 864 aa12.73□□□□□ -0.37
SUPT4H1-206ENST00000581204 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
SUPT4H1-206ENST00000581204 RGS12O14924 1447 aa12.71□□□□□ -0.37
SUPT4H1-206ENST00000581204 SHPRHQ149N8 1683 aa12.71□□□□□ -0.37
SUPT4H1-206ENST00000581204 ABCC3O15438 1527 aa12.71□□□□□ -0.38
SUPT4H1-206ENST00000581204 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
SUPT4H1-206ENST00000581204 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
SUPT4H1-206ENST00000581204 WASHC2CQ9Y4E1 1318 aa12.7□□□□□ -0.38
SUPT4H1-206ENST00000581204 NWD1Q149M9 1564 aa12.7□□□□□ -0.38
SUPT4H1-206ENST00000581204 KIF3BO15066 747 aa12.7□□□□□ -0.38
SUPT4H1-206ENST00000581204 RXRBP28702 533 aa12.7□□□□□ -0.38
SUPT4H1-206ENST00000581204 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
SUPT4H1-206ENST00000581204 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
SUPT4H1-206ENST00000581204 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
SUPT4H1-206ENST00000581204 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-206ENST00000581204 CCNB3Q8WWL7 1395 aa12.68□□□□□ -0.38
SUPT4H1-206ENST00000581204 ZNF644Q9H582 1327 aaPredicted RBP12.67□□□□□ -0.38
SUPT4H1-206ENST00000581204 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
SUPT4H1-206ENST00000581204 RBM33Q96EV2 1170 aaKnown RBP12.67□□□□□ -0.38
SUPT4H1-206ENST00000581204 CFDP1Q9UEE9 299 aaPredicted RBP12.67□□□□□ -0.38
SUPT4H1-206ENST00000581204 DIP2AQ14689 1571 aa12.67□□□□□ -0.38
SUPT4H1-206ENST00000581204 TET3O43151 1660 aa12.67□□□□□ -0.38
SUPT4H1-206ENST00000581204 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
SUPT4H1-206ENST00000581204 MYOM3Q5VTT5 1437 aa12.66□□□□□ -0.38
SUPT4H1-206ENST00000581204 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
SUPT4H1-206ENST00000581204 NBR1Q14596 966 aa12.66□□□□□ -0.38
SUPT4H1-206ENST00000581204 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
SUPT4H1-206ENST00000581204 PSEN1P49768 467 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms