RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
CDK5RAP3-204ENST00000577664 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
CDK5RAP3-204ENST00000577664 LTKP29376 864 aa16.52■□□□□ 0.24
CDK5RAP3-204ENST00000577664 UNC13BO14795 1591 aa16.51■□□□□ 0.23
CDK5RAP3-204ENST00000577664 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
CDK5RAP3-204ENST00000577664 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-204ENST00000577664 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-204ENST00000577664 MROH1Q8NDA8 1641 aa16.49■□□□□ 0.23
CDK5RAP3-204ENST00000577664 RGS12O14924 1447 aa16.49■□□□□ 0.23
CDK5RAP3-204ENST00000577664 SLAIN2Q9P270 581 aa16.49■□□□□ 0.23
CDK5RAP3-204ENST00000577664 KCNA6P17658 529 aa16.48■□□□□ 0.23
CDK5RAP3-204ENST00000577664 ABCC3O15438 1527 aa16.48■□□□□ 0.23
CDK5RAP3-204ENST00000577664 LMTK2Q8IWU2 1503 aa16.48■□□□□ 0.23
CDK5RAP3-204ENST00000577664 NUP155O75694 1391 aa16.48■□□□□ 0.23
CDK5RAP3-204ENST00000577664 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
CDK5RAP3-204ENST00000577664 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
CDK5RAP3-204ENST00000577664 MPHOSPH9Q99550 1183 aa16.46■□□□□ 0.23
CDK5RAP3-204ENST00000577664 KANK1Q14678 1352 aa16.46■□□□□ 0.23
CDK5RAP3-204ENST00000577664 NKTRP30414 1462 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-204ENST00000577664 IQGAP3Q86VI3 1631 aa16.45■□□□□ 0.22
CDK5RAP3-204ENST00000577664 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
CDK5RAP3-204ENST00000577664 MSH6P52701 1360 aa16.44■□□□□ 0.22
CDK5RAP3-204ENST00000577664 PROSER2Q86WR7 435 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-204ENST00000577664 AHDC1Q5TGY3 1603 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-204ENST00000577664 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
CDK5RAP3-204ENST00000577664 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-204ENST00000577664 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-204ENST00000577664 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
CDK5RAP3-204ENST00000577664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.225e-9■■□□□ 14.4
CDK5RAP3-204ENST00000577664 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-204ENST00000577664 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
CDK5RAP3-204ENST00000577664 AFF2P51816 1311 aa16.41■□□□□ 0.22
CDK5RAP3-204ENST00000577664 TET3O43151 1660 aa16.4■□□□□ 0.22
CDK5RAP3-204ENST00000577664 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
CDK5RAP3-204ENST00000577664 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
CDK5RAP3-204ENST00000577664 LRP5O75197 1615 aa16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 RPRD2Q5VT52 1461 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
CDK5RAP3-204ENST00000577664 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-204ENST00000577664 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-204ENST00000577664 EP400Q96L91 3159 aa16.36■□□□□ 0.21
CDK5RAP3-204ENST00000577664 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
CDK5RAP3-204ENST00000577664 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
CDK5RAP3-204ENST00000577664 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
CDK5RAP3-204ENST00000577664 ANKRD30BQ9BXX2 1392 aa16.34■□□□□ 0.21
CDK5RAP3-204ENST00000577664 CEP152O94986 1710 aa16.32■□□□□ 0.2
CDK5RAP3-204ENST00000577664 E9PCH4 1651 aa16.31■□□□□ 0.2
CDK5RAP3-204ENST00000577664 NOS1P29475 1434 aa16.31■□□□□ 0.2
CDK5RAP3-204ENST00000577664 NGLY1Q96IV0 654 aa16.31■□□□□ 0.2
CDK5RAP3-204ENST00000577664 SLC26A8Q96RN1 970 aa16.3■□□□□ 0.2
CDK5RAP3-204ENST00000577664 PIK3C2BO00750 1634 aa16.29■□□□□ 0.2
CDK5RAP3-204ENST00000577664 CFAP65Q6ZU64 1925 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-204ENST00000577664 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-204ENST00000577664 SLC52A1Q9NWF4 448 aa16.26■□□□□ 0.19
CDK5RAP3-204ENST00000577664 CCER1Q8TC90 406 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-204ENST00000577664 CADPS2Q86UW7 1296 aa16.24■□□□□ 0.19
CDK5RAP3-204ENST00000577664 TRPM2O94759 1503 aa16.24■□□□□ 0.19
CDK5RAP3-204ENST00000577664 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
CDK5RAP3-204ENST00000577664 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
CDK5RAP3-204ENST00000577664 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
CDK5RAP3-204ENST00000577664 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-204ENST00000577664 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
CDK5RAP3-204ENST00000577664 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
CDK5RAP3-204ENST00000577664 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
CDK5RAP3-204ENST00000577664 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
CDK5RAP3-204ENST00000577664 IDI1Q13907 227 aa16.19■□□□□ 0.18
CDK5RAP3-204ENST00000577664 CCDC144AA2RUR9 1427 aa16.19■□□□□ 0.18
CDK5RAP3-204ENST00000577664 LRRC59Q96AG4 307 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-204ENST00000577664 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
CDK5RAP3-204ENST00000577664 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
CDK5RAP3-204ENST00000577664 ASXL1Q8IXJ9 1541 aa16.16■□□□□ 0.18
CDK5RAP3-204ENST00000577664 ATF3P18847 181 aa16.16■□□□□ 0.18
CDK5RAP3-204ENST00000577664 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
CDK5RAP3-204ENST00000577664 TRPC5Q9UL62 973 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-204ENST00000577664 ATRNO75882 1429 aa16.16■□□□□ 0.18
CDK5RAP3-204ENST00000577664 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-204ENST00000577664 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
CDK5RAP3-204ENST00000577664 STAC3Q96MF2 364 aa16.15■□□□□ 0.18
CDK5RAP3-204ENST00000577664 DCCP43146 1447 aa16.14■□□□□ 0.17
CDK5RAP3-204ENST00000577664 FNBP4Q8N3X1 1017 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-204ENST00000577664 CLTCL1P53675 1640 aa16.14■□□□□ 0.17
CDK5RAP3-204ENST00000577664 PLEKHG1Q9ULL1 1385 aa16.13■□□□□ 0.17
CDK5RAP3-204ENST00000577664 BCL9LQ86UU0 1499 aa16.13■□□□□ 0.17
CDK5RAP3-204ENST00000577664 USP21Q9UK80 565 aa16.12■□□□□ 0.17
CDK5RAP3-204ENST00000577664 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
CDK5RAP3-204ENST00000577664 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
CDK5RAP3-204ENST00000577664 RPGRIP1LQ68CZ1 1315 aa16.11■□□□□ 0.17
CDK5RAP3-204ENST00000577664 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
CDK5RAP3-204ENST00000577664 YY1P25490 414 aa16.1■□□□□ 0.17
CDK5RAP3-204ENST00000577664 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
CDK5RAP3-204ENST00000577664 TMEM131LA2VDJ0 1609 aa16.09■□□□□ 0.17
CDK5RAP3-204ENST00000577664 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
CDK5RAP3-204ENST00000577664 KIF1BO60333 1816 aa16.08■□□□□ 0.17
CDK5RAP3-204ENST00000577664 PIK3R4Q99570 1358 aa16.08■□□□□ 0.16
CDK5RAP3-204ENST00000577664 MST1RQ04912 1400 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms