RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SEPT7Q16181 437 aaKnown RBP10.74□□□□□ -0.69
CDH8-203ENST00000577390 NACADO15069 1562 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 GTPBP4Q9BZE4 634 aaKnown RBP10.74□□□□□ -0.69
CDH8-203ENST00000577390 STK26Q9P289 416 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 CHMP4BP1P59074 171 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 CC2D1BQ5T0F9 858 aaKnown RBP10.74□□□□□ -0.69
CDH8-203ENST00000577390 KIF3AQ9Y496 699 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 KIF16BQ96L93 1317 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 CENPJQ9HC77 1338 aaPredicted RBP10.74□□□□□ -0.69
CDH8-203ENST00000577390 AK9Q5TCS8 1911 aa10.74□□□□□ -0.69
CDH8-203ENST00000577390 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 CGNQ9P2M7 1197 aaKnown RBP10.73□□□□□ -0.69
CDH8-203ENST00000577390 NEXNQ0ZGT2 675 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
CDH8-203ENST00000577390 CWC15Q9P013 229 aaKnown RBP10.73□□□□□ -0.69
CDH8-203ENST00000577390 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
CDH8-203ENST00000577390 KIF20AO95235 890 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 GOLGA6L19H0YKK7 550 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 OFD1O75665 1012 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 TEX35Q5T0J7 233 aa10.73□□□□□ -0.69
CDH8-203ENST00000577390 FAM184AQ8NB25 1140 aa10.72□□□□□ -0.69
CDH8-203ENST00000577390 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
CDH8-203ENST00000577390 RCAN3Q9UKA8 241 aa10.72□□□□□ -0.69
CDH8-203ENST00000577390 TRIM29Q14134 588 aa10.72□□□□□ -0.69
CDH8-203ENST00000577390 SLC4A10Q6U841 1118 aa10.72□□□□□ -0.69
CDH8-203ENST00000577390 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
CDH8-203ENST00000577390 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
CDH8-203ENST00000577390 DDX23Q9BUQ8 820 aaKnown RBP10.72□□□□□ -0.69
CDH8-203ENST00000577390 FYB1O15117 783 aa10.71□□□□□ -0.69
CDH8-203ENST00000577390 NGEFQ8N5V2 710 aa10.71□□□□□ -0.69
CDH8-203ENST00000577390 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.69
CDH8-203ENST00000577390 SYCP1Q15431 976 aa10.71□□□□□ -0.69
CDH8-203ENST00000577390 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
CDH8-203ENST00000577390 CLGNO14967 610 aa10.71□□□□□ -0.69
CDH8-203ENST00000577390 STK31Q9BXU1 1019 aa10.71□□□□□ -0.69
CDH8-203ENST00000577390 PHF14O94880 888 aa10.71□□□□□ -0.7
CDH8-203ENST00000577390 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.7
CDH8-203ENST00000577390 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
CDH8-203ENST00000577390 ENOX2Q16206 610 aaKnown RBP10.7□□□□□ -0.7
CDH8-203ENST00000577390 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
CDH8-203ENST00000577390 ANKRD18AQ8IVF6 992 aa10.7□□□□□ -0.7
CDH8-203ENST00000577390 DRC1Q96MC2 740 aa10.7□□□□□ -0.7
CDH8-203ENST00000577390 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
CDH8-203ENST00000577390 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
CDH8-203ENST00000577390 CCNB3Q8WWL7 1395 aa10.69□□□□□ -0.7
CDH8-203ENST00000577390 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
CDH8-203ENST00000577390 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
CDH8-203ENST00000577390 BACH2Q9BYV9 841 aa10.69□□□□□ -0.7
CDH8-203ENST00000577390 HOMER2Q9NSB8 354 aa10.69□□□□□ -0.7
CDH8-203ENST00000577390 MATR3P43243 847 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH8-203ENST00000577390 PPP4R3BQ5MIZ7 849 aa10.69□□□□□ -0.7
CDH8-203ENST00000577390 DHX37Q8IY37 1157 aaKnown RBP10.69□□□□□ -0.7
CDH8-203ENST00000577390 CCDC94Q9BW85 323 aaPredicted RBP10.69□□□□□ -0.7
CDH8-203ENST00000577390 TRIM21P19474 475 aaKnown RBP10.69□□□□□ -0.7
CDH8-203ENST00000577390 NF2P35240 595 aa10.69□□□□□ -0.7
CDH8-203ENST00000577390 MYO6Q9UM54 1294 aa10.69□□□□□ -0.7
CDH8-203ENST00000577390 CENPQQ7L2Z9 268 aaPredicted RBP10.68□□□□□ -0.7
CDH8-203ENST00000577390 ERICH2A1L162 156 aa10.68□□□□□ -0.7
CDH8-203ENST00000577390 BECN2A8MW95 431 aa10.68□□□□□ -0.7
CDH8-203ENST00000577390 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
CDH8-203ENST00000577390 CLASRPQ8N2M8 674 aaKnown RBP10.67□□□□□ -0.7
CDH8-203ENST00000577390 MPHOSPH10O00566 681 aaKnown RBP10.67□□□□□ -0.7
CDH8-203ENST00000577390 WDHD1O75717 1129 aaPredicted RBP10.67□□□□□ -0.7
CDH8-203ENST00000577390 NOP2P46087 812 aaKnown RBP10.67□□□□□ -0.7
CDH8-203ENST00000577390 GRPEL1Q9HAV7 217 aa10.67□□□□□ -0.7
CDH8-203ENST00000577390 EZRP15311 586 aaKnown RBP10.67□□□□□ -0.7
CDH8-203ENST00000577390 HDAC5Q9UQL6 1122 aa10.67□□□□□ -0.7
CDH8-203ENST00000577390 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
CDH8-203ENST00000577390 CALCOCO1Q9P1Z2 691 aa10.67□□□□□ -0.7
CDH8-203ENST00000577390 NFXL1Q6ZNB6 911 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 E9PSI1 815 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 RFX1P22670 979 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 WDR78Q5VTH9 848 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 RRP1P56182 461 aaKnown RBP10.66□□□□□ -0.7
CDH8-203ENST00000577390 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
CDH8-203ENST00000577390 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
CDH8-203ENST00000577390 TTC16Q8NEE8 873 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
CDH8-203ENST00000577390 COMMD10Q9Y6G5 202 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 SETD5Q9C0A6 1442 aa10.66□□□□□ -0.7
CDH8-203ENST00000577390 ITPRIPQ8IWB1 547 aa10.65□□□□□ -0.7
CDH8-203ENST00000577390 RRP7BPQ9NSQ0 103 aa10.65□□□□□ -0.7
CDH8-203ENST00000577390 CCDC27Q2M243 656 aa10.65□□□□□ -0.7
CDH8-203ENST00000577390 DESP17661 470 aa10.65□□□□□ -0.7
CDH8-203ENST00000577390 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
CDH8-203ENST00000577390 H0YHG0 523 aa10.65□□□□□ -0.71
CDH8-203ENST00000577390 TIGD1Q96MW7 591 aa10.65□□□□□ -0.71
CDH8-203ENST00000577390 MFAP1P55081 439 aaKnown RBP10.64□□□□□ -0.71
CDH8-203ENST00000577390 ZWINTO95229 277 aa10.64□□□□□ -0.71
CDH8-203ENST00000577390 DIAPH3Q9NSV4 1193 aa10.64□□□□□ -0.71
CDH8-203ENST00000577390 SMG6Q86US8 1419 aaKnown RBP10.64□□□□□ -0.71
CDH8-203ENST00000577390 ATP2B2Q01814 1243 aa10.64□□□□□ -0.71
CDH8-203ENST00000577390 NGDNQ8NEJ9 315 aaKnown RBP10.64□□□□□ -0.71
CDH8-203ENST00000577390 CARD11Q9BXL7 1154 aa10.64□□□□□ -0.71
CDH8-203ENST00000577390 CAGE1Q8TC20 777 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms