RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 ZNF142P52746 1687 aaPredicted RBP10.05□□□□□ -0.8
TCF4-229ENST00000565580 CEP170BQ9Y4F5 1589 aaPredicted RBP10.05□□□□□ -0.8
TCF4-229ENST00000565580 NCKAP5LQ9HCH0 1330 aa10.05□□□□□ -0.8
TCF4-229ENST00000565580 KDM5DQ9BY66 1539 aa10.04□□□□□ -0.8
TCF4-229ENST00000565580 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
TCF4-229ENST00000565580 FAM212AQ96EL1 285 aa10.04□□□□□ -0.8
TCF4-229ENST00000565580 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
TCF4-229ENST00000565580 MAST1Q9Y2H9 1570 aa10.04□□□□□ -0.8
TCF4-229ENST00000565580 POTEMA6NI47 508 aa10.03□□□□□ -0.8
TCF4-229ENST00000565580 FKBP8Q14318 412 aa10.03□□□□□ -0.8
TCF4-229ENST00000565580 PCDHB13Q9Y5F0 798 aa10.03□□□□□ -0.8
TCF4-229ENST00000565580 LTBP4Q8N2S1 1624 aa10.03□□□□□ -0.8
TCF4-229ENST00000565580 PZPP20742 1482 aa10.03□□□□□ -0.8
TCF4-229ENST00000565580 NUBP1P53384 320 aa10.02□□□□□ -0.81
TCF4-229ENST00000565580 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
TCF4-229ENST00000565580 A2ML1A8K2U0 1454 aa10.02□□□□□ -0.81
TCF4-229ENST00000565580 PLA2R1Q13018 1463 aa10.02□□□□□ -0.81
TCF4-229ENST00000565580 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.81
TCF4-229ENST00000565580 WASHC2CQ9Y4E1 1318 aa10.02□□□□□ -0.81
TCF4-229ENST00000565580 FAM135AQ9P2D6 1515 aa10.02□□□□□ -0.81
TCF4-229ENST00000565580 TNRQ92752 1358 aa10.01□□□□□ -0.81
TCF4-229ENST00000565580 DNMT1P26358 1616 aaKnown RBP10.01□□□□□ -0.81
TCF4-229ENST00000565580 SEC24BO95487 1268 aa10.01□□□□□ -0.81
TCF4-229ENST00000565580 IER5LQ5T953 404 aa10.01□□□□□ -0.81
TCF4-229ENST00000565580 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
TCF4-229ENST00000565580 RNF17Q9BXT8 1623 aaKnown RBP10□□□□□ -0.81
TCF4-229ENST00000565580 TTLL13PA6NNM8 815 aa10□□□□□ -0.81
TCF4-229ENST00000565580 POTEJP0CG39 1038 aa10□□□□□ -0.81
TCF4-229ENST00000565580 TRPC6Q9Y210 931 aa10□□□□□ -0.81
TCF4-229ENST00000565580 ZNF335Q9H4Z2 1342 aaPredicted RBP10□□□□□ -0.81
TCF4-229ENST00000565580 MROH1Q8NDA8 1641 aa10□□□□□ -0.81
TCF4-229ENST00000565580 PTPN23Q9H3S7 1636 aa10□□□□□ -0.81
TCF4-229ENST00000565580 ABCC5O15440 1437 aa9.99□□□□□ -0.81
TCF4-229ENST00000565580 ABCC3O15438 1527 aa9.99□□□□□ -0.81
TCF4-229ENST00000565580 PKD2Q13563 968 aa9.99□□□□□ -0.81
TCF4-229ENST00000565580 POTEGQ6S5H5 508 aa9.99□□□□□ -0.81
TCF4-229ENST00000565580 EIF2AK4Q9P2K8 1649 aaKnown RBP9.98□□□□□ -0.81
TCF4-229ENST00000565580 FGD6Q6ZV73 1430 aa9.98□□□□□ -0.81
TCF4-229ENST00000565580 SHANK2Q9UPX8 1470 aa9.98□□□□□ -0.81
TCF4-229ENST00000565580 DUOX2Q9NRD8 1548 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 CROCC2H7BZ55 1655 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 ILDR2Q71H61 639 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 DISP3Q9P2K9 1392 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 DAPK1P53355 1430 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
TCF4-229ENST00000565580 RRP7BPQ9NSQ0 103 aa9.96□□□□□ -0.82
TCF4-229ENST00000565580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.96□□□□□ -0.82
TCF4-229ENST00000565580 NLRP1Q9C000 1473 aa9.96□□□□□ -0.82
TCF4-229ENST00000565580 ZC3H13Q5T200 1668 aaKnown RBP9.96□□□□□ -0.82
TCF4-229ENST00000565580 CEP152O94986 1710 aa9.96□□□□□ -0.82
TCF4-229ENST00000565580 TRIM35Q9UPQ4 493 aa9.95□□□□□ -0.82
TCF4-229ENST00000565580 ERVK-7P63135 1459 aa9.95□□□□□ -0.82
TCF4-229ENST00000565580 IQSEC2Q5JU85 1478 aa9.95□□□□□ -0.82
TCF4-229ENST00000565580 SPATA31D1Q6ZQQ2 1576 aa9.95□□□□□ -0.82
TCF4-229ENST00000565580 POLR1AO95602 1720 aaPredicted RBP9.94□□□□□ -0.82
TCF4-229ENST00000565580 UGGT1Q9NYU2 1555 aa9.94□□□□□ -0.82
TCF4-229ENST00000565580 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
TCF4-229ENST00000565580 CHIC2Q9UKJ5 165 aa9.94□□□□□ -0.82
TCF4-229ENST00000565580 PRDM15P57071 1507 aaPredicted RBP9.93□□□□□ -0.82
TCF4-229ENST00000565580 ERBINQ96RT1 1412 aa9.93□□□□□ -0.82
TCF4-229ENST00000565580 THEMISQ8N1K5 641 aaPredicted RBP9.93□□□□□ -0.82
TCF4-229ENST00000565580 ANKLE2Q86XL3 938 aa9.92□□□□□ -0.82
TCF4-229ENST00000565580 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
TCF4-229ENST00000565580 CFAP65Q6ZU64 1925 aaKnown RBP9.92□□□□□ -0.82
TCF4-229ENST00000565580 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
TCF4-229ENST00000565580 FAM163AQ96GL9 167 aaPredicted RBP9.91□□□□□ -0.82
TCF4-229ENST00000565580 DEPDC5O75140 1603 aa9.91□□□□□ -0.82
TCF4-229ENST00000565580 MED14O60244 1454 aa9.91□□□□□ -0.82
TCF4-229ENST00000565580 NPHP4O75161 1426 aaPredicted RBP9.9□□□□□ -0.82
TCF4-229ENST00000565580 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.82
TCF4-229ENST00000565580 ANKRD30AQ9BXX3 1397 aa9.9□□□□□ -0.82
TCF4-229ENST00000565580 VWDEQ8N2E2 1590 aa9.9□□□□□ -0.82
TCF4-229ENST00000565580 SOCS7O14512 581 aa9.9□□□□□ -0.82
TCF4-229ENST00000565580 TMEM106CQ9BVX2 250 aa9.9□□□□□ -0.82
TCF4-229ENST00000565580 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
TCF4-229ENST00000565580 ADGRL2O95490 1459 aa9.9□□□□□ -0.83
TCF4-229ENST00000565580 UBAP1LF5GYI3 381 aa9.89□□□□□ -0.83
TCF4-229ENST00000565580 FAM50AQ14320 339 aaKnown RBP9.89□□□□□ -0.83
TCF4-229ENST00000565580 UBR1Q8IWV7 1749 aa9.89□□□□□ -0.83
TCF4-229ENST00000565580 KANK1Q14678 1352 aa9.88□□□□□ -0.83
TCF4-229ENST00000565580 CPS1P31327 1500 aa9.87□□□□□ -0.83
TCF4-229ENST00000565580 LMTK2Q8IWU2 1503 aa9.87□□□□□ -0.83
TCF4-229ENST00000565580 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
TCF4-229ENST00000565580 PLCG2P16885 1265 aa9.87□□□□□ -0.83
TCF4-229ENST00000565580 ARHGAP23Q9P227 1491 aa9.86□□□□□ -0.83
TCF4-229ENST00000565580 LTKP29376 864 aa9.86□□□□□ -0.83
TCF4-229ENST00000565580 PIK3C2BO00750 1634 aa9.85□□□□□ -0.83
TCF4-229ENST00000565580 SCAF11Q99590 1463 aaKnown RBP9.85□□□□□ -0.83
TCF4-229ENST00000565580 ANKRD50Q9ULJ7 1429 aa9.85□□□□□ -0.83
TCF4-229ENST00000565580 SLIT1O75093 1534 aa9.85□□□□□ -0.83
TCF4-229ENST00000565580 STRCP1A6NGW2 1772 aa9.85□□□□□ -0.83
TCF4-229ENST00000565580 SYNMO15061 1565 aa9.84□□□□□ -0.83
TCF4-229ENST00000565580 NOS1P29475 1434 aa9.84□□□□□ -0.83
TCF4-229ENST00000565580 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
TCF4-229ENST00000565580 IDI1Q13907 227 aa9.84□□□□□ -0.83
TCF4-229ENST00000565580 PPARGC1BQ86YN6 1023 aaKnown RBP9.84□□□□□ -0.83
TCF4-229ENST00000565580 ALKQ9UM73 1620 aa9.83□□□□□ -0.84
TCF4-229ENST00000565580 GSE1Q14687 1217 aa9.83□□□□□ -0.84
TCF4-229ENST00000565580 TXNDC2Q86VQ3 553 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms