RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
IRF9-208ENST00000560311 MADDQ8WXG6 1647 aa10.4□□□□□ -0.74
IRF9-208ENST00000560311 ARHGEF12Q9NZN5 1544 aa10.4□□□□□ -0.74
IRF9-208ENST00000560311 LOC105371045A0A1W2PR82 267 aa10.4□□□□□ -0.74
IRF9-208ENST00000560311 ADAMTSL3P82987 1691 aa10.4□□□□□ -0.74
IRF9-208ENST00000560311 DIP2CQ9Y2E4 1556 aa10.39□□□□□ -0.75
IRF9-208ENST00000560311 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
IRF9-208ENST00000560311 ABCA6Q8N139 1617 aa10.39□□□□□ -0.75
IRF9-208ENST00000560311 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
IRF9-208ENST00000560311 TRAPPC8Q9Y2L5 1435 aa10.38□□□□□ -0.75
IRF9-208ENST00000560311 CCNB3Q8WWL7 1395 aa10.38□□□□□ -0.75
IRF9-208ENST00000560311 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
IRF9-208ENST00000560311 SUPT6HQ7KZ85 1726 aaKnown RBP10.37□□□□□ -0.75
IRF9-208ENST00000560311 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
IRF9-208ENST00000560311 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
IRF9-208ENST00000560311 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
IRF9-208ENST00000560311 IFNLR1Q8IU57 520 aaPredicted RBP10.36□□□□□ -0.75
IRF9-208ENST00000560311 ATP10AO60312 1499 aa10.36□□□□□ -0.75
IRF9-208ENST00000560311 PTPRMP28827 1452 aa10.36□□□□□ -0.75
IRF9-208ENST00000560311 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
IRF9-208ENST00000560311 MLH3Q9UHC1 1453 aa10.36□□□□□ -0.75
IRF9-208ENST00000560311 ARID4BQ4LE39 1312 aaPredicted RBP10.35□□□□□ -0.75
IRF9-208ENST00000560311 INO80Q9ULG1 1556 aaPredicted RBP10.35□□□□□ -0.75
IRF9-208ENST00000560311 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
IRF9-208ENST00000560311 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
IRF9-208ENST00000560311 LRRC9Q6ZRR7 1453 aa10.35□□□□□ -0.75
IRF9-208ENST00000560311 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
IRF9-208ENST00000560311 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
IRF9-208ENST00000560311 KIAA1107Q9UPP5 1409 aa10.33□□□□□ -0.76
IRF9-208ENST00000560311 ATP7AQ04656 1500 aa10.33□□□□□ -0.76
IRF9-208ENST00000560311 AFAP1Q8N556 730 aa10.33□□□□□ -0.76
IRF9-208ENST00000560311 FER1L4A9Z1Z3 1794 aa10.32□□□□□ -0.76
IRF9-208ENST00000560311 KIDINS220Q9ULH0 1771 aa10.32□□□□□ -0.76
IRF9-208ENST00000560311 CAMSAP2Q08AD1 1489 aa10.32□□□□□ -0.76
IRF9-208ENST00000560311 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
IRF9-208ENST00000560311 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
IRF9-208ENST00000560311 PLXNC1O60486 1568 aa10.31□□□□□ -0.76
IRF9-208ENST00000560311 ARSIQ5FYB1 569 aa10.31□□□□□ -0.76
IRF9-208ENST00000560311 AGLP35573 1532 aa10.3□□□□□ -0.76
IRF9-208ENST00000560311 PTGER2P43116 358 aa10.3□□□□□ -0.76
IRF9-208ENST00000560311 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
IRF9-208ENST00000560311 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
IRF9-208ENST00000560311 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
IRF9-208ENST00000560311 MS4A4AQ96JQ5 239 aa10.28□□□□□ -0.76
IRF9-208ENST00000560311 ARHGEF5Q12774 1597 aa10.27□□□□□ -0.76
IRF9-208ENST00000560311 HNRNPMP52272 730 aaKnown RBP eCLIP10.27□□□□□ -0.77
IRF9-208ENST00000560311 MLECQ14165 292 aa10.27□□□□□ -0.77
IRF9-208ENST00000560311 SPAG9O60271 1321 aaKnown RBP10.27□□□□□ -0.77
IRF9-208ENST00000560311 ZNF644Q9H582 1327 aaPredicted RBP10.27□□□□□ -0.77
IRF9-208ENST00000560311 MYOM3Q5VTT5 1437 aa10.26□□□□□ -0.77
IRF9-208ENST00000560311 LMTK3Q96Q04 1460 aa10.26□□□□□ -0.77
IRF9-208ENST00000560311 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
IRF9-208ENST00000560311 A2MP01023 1474 aa10.25□□□□□ -0.77
IRF9-208ENST00000560311 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
IRF9-208ENST00000560311 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
IRF9-208ENST00000560311 LSM11P83369 360 aaKnown RBP eCLIP10.24□□□□□ -0.77
IRF9-208ENST00000560311 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
IRF9-208ENST00000560311 RTEL1-TNFRSF6BF6WH68 1400 aa10.24□□□□□ -0.77
IRF9-208ENST00000560311 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
IRF9-208ENST00000560311 MAST1Q9Y2H9 1570 aa10.22□□□□□ -0.77
IRF9-208ENST00000560311 SOX12O15370 315 aa10.22□□□□□ -0.77
IRF9-208ENST00000560311 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
IRF9-208ENST00000560311 CNTLNQ9NXG0 1405 aa10.21□□□□□ -0.78
IRF9-208ENST00000560311 PTPN23Q9H3S7 1636 aa10.21□□□□□ -0.78
IRF9-208ENST00000560311 MROH2AA6NES4 1674 aa10.21□□□□□ -0.78
IRF9-208ENST00000560311 C3P01024 1663 aa10.21□□□□□ -0.78
IRF9-208ENST00000560311 PREX1Q8TCU6 1659 aa10.21□□□□□ -0.78
IRF9-208ENST00000560311 FGD6Q6ZV73 1430 aa10.2□□□□□ -0.78
IRF9-208ENST00000560311 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
IRF9-208ENST00000560311 TCOF1Q13428 1488 aaKnown RBP10.19□□□□□ -0.78
IRF9-208ENST00000560311 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
IRF9-208ENST00000560311 DNMT1P26358 1616 aaKnown RBP10.18□□□□□ -0.78
IRF9-208ENST00000560311 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
IRF9-208ENST00000560311 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
IRF9-208ENST00000560311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.17□□□□□ -0.78
IRF9-208ENST00000560311 ZFP91Q96JP5 570 aaPredicted RBP10.17□□□□□ -0.78
IRF9-208ENST00000560311 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
IRF9-208ENST00000560311 RNF17Q9BXT8 1623 aaKnown RBP10.17□□□□□ -0.78
IRF9-208ENST00000560311 EIF2AK4Q9P2K8 1649 aaKnown RBP10.17□□□□□ -0.78
IRF9-208ENST00000560311 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
IRF9-208ENST00000560311 DHX29Q7Z478 1369 aaKnown RBP10.16□□□□□ -0.78
IRF9-208ENST00000560311 DAPK1P53355 1430 aa10.16□□□□□ -0.78
IRF9-208ENST00000560311 MYO3AQ8NEV4 1616 aa10.15□□□□□ -0.78
IRF9-208ENST00000560311 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.78
IRF9-208ENST00000560311 RSPH4AQ5TD94 716 aa10.15□□□□□ -0.78
IRF9-208ENST00000560311 RNF25Q96BH1 459 aaPredicted RBP10.15□□□□□ -0.78
IRF9-208ENST00000560311 ESF1Q9H501 851 aaKnown RBP10.15□□□□□ -0.78
IRF9-208ENST00000560311 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
IRF9-208ENST00000560311 ABCC5O15440 1437 aa10.15□□□□□ -0.79
IRF9-208ENST00000560311 NPATQ14207 1427 aa10.15□□□□□ -0.79
IRF9-208ENST00000560311 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
IRF9-208ENST00000560311 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
IRF9-208ENST00000560311 DUOX2Q9NRD8 1548 aa10.13□□□□□ -0.79
IRF9-208ENST00000560311 ZNF142P52746 1687 aaPredicted RBP10.13□□□□□ -0.79
IRF9-208ENST00000560311 ZC3H13Q5T200 1668 aaKnown RBP10.13□□□□□ -0.79
IRF9-208ENST00000560311 NUDT7P0C024 238 aa10.13□□□□□ -0.79
IRF9-208ENST00000560311 MROH1Q8NDA8 1641 aa10.13□□□□□ -0.79
IRF9-208ENST00000560311 TSPY4P0CV99 314 aa10.12□□□□□ -0.79
IRF9-208ENST00000560311 TSPY10P0CW01 314 aa10.12□□□□□ -0.79
IRF9-208ENST00000560311 HSPA2P54652 639 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms