RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 RSPH4AQ5TD94 716 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 ABCC5O15440 1437 aa6.14□□□□□ -1.43
ZEB1-212ENST00000558655 FAM135AQ9P2D6 1515 aa6.13□□□□□ -1.43
ZEB1-212ENST00000558655 VSIG10Q8N0Z9 540 aa6.13□□□□□ -1.43
ZEB1-212ENST00000558655 ZNF335Q9H4Z2 1342 aaPredicted RBP6.13□□□□□ -1.43
ZEB1-212ENST00000558655 MYO3AQ8NEV4 1616 aa6.13□□□□□ -1.43
ZEB1-212ENST00000558655 CFDP1Q9UEE9 299 aaPredicted RBP6.13□□□□□ -1.43
ZEB1-212ENST00000558655 FBXO3Q9UK99 471 aa6.13□□□□□ -1.43
ZEB1-212ENST00000558655 ATP7AQ04656 1500 aa6.13□□□□□ -1.43
ZEB1-212ENST00000558655 KCNH8Q96L42 1107 aa6.12□□□□□ -1.43
ZEB1-212ENST00000558655 ABCA6Q8N139 1617 aa6.12□□□□□ -1.43
ZEB1-212ENST00000558655 RAPGEF3O95398 923 aa6.12□□□□□ -1.43
ZEB1-212ENST00000558655 CEP170BQ9Y4F5 1589 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-212ENST00000558655 DIP2CQ9Y2E4 1556 aa6.11□□□□□ -1.43
ZEB1-212ENST00000558655 BCL9LQ86UU0 1499 aa6.11□□□□□ -1.43
ZEB1-212ENST00000558655 SCAPERQ9BY12 1400 aa6.11□□□□□ -1.43
ZEB1-212ENST00000558655 HFM1A2PYH4 1435 aa6.1□□□□□ -1.43
ZEB1-212ENST00000558655 DUOX2Q9NRD8 1548 aa6.1□□□□□ -1.43
ZEB1-212ENST00000558655 CHD4Q14839 1912 aa6.1□□□□□ -1.43
ZEB1-212ENST00000558655 C1QBPQ07021 282 aaKnown RBP6.1□□□□□ -1.43
ZEB1-212ENST00000558655 RALGAPBQ86X10 1494 aa6.1□□□□□ -1.43
ZEB1-212ENST00000558655 SIGLEC1Q9BZZ2 1709 aa6.1□□□□□ -1.43
ZEB1-212ENST00000558655 FKBP8Q14318 412 aa6.09□□□□□ -1.43
ZEB1-212ENST00000558655 ZNF644Q9H582 1327 aaPredicted RBP6.09□□□□□ -1.43
ZEB1-212ENST00000558655 ACIN1Q9UKV3 1341 aaKnown RBP6.09□□□□□ -1.43
ZEB1-212ENST00000558655 NEURL4Q96JN8 1562 aa6.08□□□□□ -1.44
ZEB1-212ENST00000558655 ERBINQ96RT1 1412 aa6.08□□□□□ -1.44
ZEB1-212ENST00000558655 PIP4K2BP78356 416 aa6.08□□□□□ -1.44
ZEB1-212ENST00000558655 ZC3H13Q5T200 1668 aaKnown RBP6.08□□□□□ -1.44
ZEB1-212ENST00000558655 A2ML1A8K2U0 1454 aa6.08□□□□□ -1.44
ZEB1-212ENST00000558655 MROH1Q8NDA8 1641 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 NAIPQ13075 1403 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 ANKRD30AQ9BXX3 1397 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 IQGAP3Q86VI3 1631 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 CAPN15O75808 1086 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 PHLPP1O60346 1717 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 RGS12O14924 1447 aa6.07□□□□□ -1.44
ZEB1-212ENST00000558655 BLMP54132 1417 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-212ENST00000558655 PRDM15P57071 1507 aaPredicted RBP6.07□□□□□ -1.44
ZEB1-212ENST00000558655 RBM6P78332 1123 aaKnown RBP6.06□□□□□ -1.44
ZEB1-212ENST00000558655 AHDC1Q5TGY3 1603 aaPredicted RBP6.06□□□□□ -1.44
ZEB1-212ENST00000558655 HNRNPMP52272 730 aaKnown RBP eCLIP6.06□□□□□ -1.444e-6■■■■□ 20.1
ZEB1-212ENST00000558655 A2MP01023 1474 aa6.05□□□□□ -1.44
ZEB1-212ENST00000558655 NGLY1Q96IV0 654 aa6.05□□□□□ -1.44
ZEB1-212ENST00000558655 LMTK2Q8IWU2 1503 aa6.05□□□□□ -1.44
ZEB1-212ENST00000558655 SPAG9O60271 1321 aaKnown RBP6.05□□□□□ -1.44
ZEB1-212ENST00000558655 SETD5Q9C0A6 1442 aa6.05□□□□□ -1.44
ZEB1-212ENST00000558655 COL16A1Q07092 1604 aaPredicted RBP6.05□□□□□ -1.44
ZEB1-212ENST00000558655 TET3O43151 1660 aa6.04□□□□□ -1.44
ZEB1-212ENST00000558655 ABCB7O75027 752 aa6.04□□□□□ -1.44
ZEB1-212ENST00000558655 FAM50AQ14320 339 aaKnown RBP6.04□□□□□ -1.44
ZEB1-212ENST00000558655 KIAA1210Q9ULL0 1709 aa6.04□□□□□ -1.44
ZEB1-212ENST00000558655 DHX29Q7Z478 1369 aaKnown RBP6.04□□□□□ -1.44
ZEB1-212ENST00000558655 KIF15Q9NS87 1388 aa6.04□□□□□ -1.44
ZEB1-212ENST00000558655 ZNF777Q9ULD5 760 aaPredicted RBP6.04□□□□□ -1.44
ZEB1-212ENST00000558655 TSPY4P0CV99 314 aa6.03□□□□□ -1.44
ZEB1-212ENST00000558655 TSPY10P0CW01 314 aa6.03□□□□□ -1.44
ZEB1-212ENST00000558655 ZNF784Q8NCA9 323 aaPredicted RBP6.03□□□□□ -1.44
ZEB1-212ENST00000558655 ANKRD50Q9ULJ7 1429 aa6.03□□□□□ -1.44
ZEB1-212ENST00000558655 IQGAP1P46940 1657 aa6.03□□□□□ -1.44
ZEB1-212ENST00000558655 ROBO1Q9Y6N7 1651 aa6.03□□□□□ -1.44
ZEB1-212ENST00000558655 ATXN8OSP0DMR3 200 aa6.02□□□□□ -1.45
ZEB1-212ENST00000558655 AFAP1Q8N556 730 aa6.02□□□□□ -1.45
ZEB1-212ENST00000558655 CEP152O94986 1710 aa6.02□□□□□ -1.45
ZEB1-212ENST00000558655 SAMD1Q6SPF0 538 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-212ENST00000558655 PITPNM2Q9BZ72 1349 aa6.01□□□□□ -1.45
ZEB1-212ENST00000558655 PZPP20742 1482 aa6.01□□□□□ -1.45
ZEB1-212ENST00000558655 SCAF11Q99590 1463 aaKnown RBP6.01□□□□□ -1.45
ZEB1-212ENST00000558655 E9PCH4 1651 aa6.01□□□□□ -1.45
ZEB1-212ENST00000558655 RAB3GAP2Q9H2M9 1393 aa6□□□□□ -1.45
ZEB1-212ENST00000558655 BCL11AQ9H165 835 aa6□□□□□ -1.45
ZEB1-212ENST00000558655 EFCAB6Q5THR3 1501 aa6□□□□□ -1.45
ZEB1-212ENST00000558655 NCOA3Q9Y6Q9 1424 aa6□□□□□ -1.45
ZEB1-212ENST00000558655 GIGYF1O75420 1035 aaPredicted RBP6□□□□□ -1.45
ZEB1-212ENST00000558655 DIP2AQ14689 1571 aa6□□□□□ -1.45
ZEB1-212ENST00000558655 CLTCQ00610 1675 aaKnown RBP5.99□□□□□ -1.45
ZEB1-212ENST00000558655 ARHGAP31Q2M1Z3 1444 aa5.99□□□□□ -1.45
ZEB1-212ENST00000558655 RPRD2Q5VT52 1461 aaKnown RBP5.99□□□□□ -1.45
ZEB1-212ENST00000558655 KDM5AP29375 1690 aaKnown RBP5.99□□□□□ -1.45
ZEB1-212ENST00000558655 DSG3P32926 999 aa5.99□□□□□ -1.45
ZEB1-212ENST00000558655 DISP2A7MBM2 1401 aa5.98□□□□□ -1.45
ZEB1-212ENST00000558655 PIK3C2BO00750 1634 aa5.98□□□□□ -1.45
ZEB1-212ENST00000558655 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.97□□□□□ -1.45
ZEB1-212ENST00000558655 PDIA4P13667 645 aaKnown RBP5.97□□□□□ -1.45
ZEB1-212ENST00000558655 POLA2Q14181 598 aa5.97□□□□□ -1.45
ZEB1-212ENST00000558655 RGPD1P0DJD0 1748 aa5.97□□□□□ -1.45
ZEB1-212ENST00000558655 POTEHQ6S545 545 aa5.97□□□□□ -1.45
ZEB1-212ENST00000558655 PARD3Q8TEW0 1356 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 NCKAP5LQ9HCH0 1330 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 TNS4Q8IZW8 715 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 CHMP4AQ9BY43 222 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 RRP7BPQ9NSQ0 103 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 CHIC2Q9UKJ5 165 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 LRP6O75581 1613 aa5.96□□□□□ -1.45
ZEB1-212ENST00000558655 TRPM2O94759 1503 aa5.96□□□□□ -1.46
ZEB1-212ENST00000558655 STRCP1A6NGW2 1772 aa5.96□□□□□ -1.46
ZEB1-212ENST00000558655 HSPA6P17066 643 aa5.96□□□□□ -1.46
ZEB1-212ENST00000558655 NPHP4O75161 1426 aaPredicted RBP5.96□□□□□ -1.46
ZEB1-212ENST00000558655 CLSPNQ9HAW4 1339 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms