RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ZNF326Q5BKZ1 582 aaKnown RBP11.33□□□□□ -0.6
SPG11-209ENST00000558253 NEURL4Q96JN8 1562 aa11.33□□□□□ -0.6
SPG11-209ENST00000558253 ABCA9Q8IUA7 1624 aa11.32□□□□□ -0.6
SPG11-209ENST00000558253 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
SPG11-209ENST00000558253 KDM2AQ9Y2K7 1162 aa11.31□□□□□ -0.6
SPG11-209ENST00000558253 PTPRTO14522 1441 aa11.31□□□□□ -0.6
SPG11-209ENST00000558253 TRAPPC8Q9Y2L5 1435 aa11.31□□□□□ -0.6
SPG11-209ENST00000558253 ST20-MTHFSA0A0A6YYL1 179 aa11.3□□□□□ -0.6
SPG11-209ENST00000558253 FANCAO15360 1455 aa11.3□□□□□ -0.6
SPG11-209ENST00000558253 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
SPG11-209ENST00000558253 CDCA8Q53HL2 280 aa11.29□□□□□ -0.6
SPG11-209ENST00000558253 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
SPG11-209ENST00000558253 INSRP06213 1382 aa11.28□□□□□ -0.6
SPG11-209ENST00000558253 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
SPG11-209ENST00000558253 A2MP01023 1474 aa11.28□□□□□ -0.6
SPG11-209ENST00000558253 NUBP1P53384 320 aa11.28□□□□□ -0.6
SPG11-209ENST00000558253 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
SPG11-209ENST00000558253 PRDM15P57071 1507 aaPredicted RBP11.28□□□□□ -0.6
SPG11-209ENST00000558253 DEPDC5O75140 1603 aa11.27□□□□□ -0.6
SPG11-209ENST00000558253 TRPM2O94759 1503 aa11.27□□□□□ -0.61
SPG11-209ENST00000558253 TMF1P82094 1093 aa11.27□□□□□ -0.61
SPG11-209ENST00000558253 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
SPG11-209ENST00000558253 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
SPG11-209ENST00000558253 ATP7AQ04656 1500 aa11.26□□□□□ -0.61
SPG11-209ENST00000558253 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
SPG11-209ENST00000558253 CFAP74Q9C0B2 1584 aa11.26□□□□□ -0.61
SPG11-209ENST00000558253 INO80Q9ULG1 1556 aaPredicted RBP11.26□□□□□ -0.61
SPG11-209ENST00000558253 ASXL2Q76L83 1435 aa11.26□□□□□ -0.61
SPG11-209ENST00000558253 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
SPG11-209ENST00000558253 FAM9BQ8IZU0 186 aa11.25□□□□□ -0.61
SPG11-209ENST00000558253 AFAP1Q8N556 730 aa11.25□□□□□ -0.61
SPG11-209ENST00000558253 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
SPG11-209ENST00000558253 TET3O43151 1660 aa11.24□□□□□ -0.61
SPG11-209ENST00000558253 RGL3Q3MIN7 710 aa11.24□□□□□ -0.61
SPG11-209ENST00000558253 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
SPG11-209ENST00000558253 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
SPG11-209ENST00000558253 ZNF518AQ6AHZ1 1483 aa11.24□□□□□ -0.61
SPG11-209ENST00000558253 ZMYM4Q5VZL5 1548 aa11.24□□□□□ -0.61
SPG11-209ENST00000558253 CLCN6P51797 869 aa11.23□□□□□ -0.61
SPG11-209ENST00000558253 NLRP13Q86W25 1043 aa11.23□□□□□ -0.61
SPG11-209ENST00000558253 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
SPG11-209ENST00000558253 PNISRQ8TF01 805 aaKnown RBP11.23□□□□□ -0.61
SPG11-209ENST00000558253 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
SPG11-209ENST00000558253 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
SPG11-209ENST00000558253 LMTK2Q8IWU2 1503 aa11.23□□□□□ -0.61
SPG11-209ENST00000558253 EIF3AQ14152 1382 aaKnown RBP11.22□□□□□ -0.61
SPG11-209ENST00000558253 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
SPG11-209ENST00000558253 TESK2Q96S53 571 aa11.22□□□□□ -0.61
SPG11-209ENST00000558253 POLR3GLQ9BT43 218 aa11.22□□□□□ -0.61
SPG11-209ENST00000558253 LRPPRCP42704 1394 aaKnown RBP11.21□□□□□ -0.61
SPG11-209ENST00000558253 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
SPG11-209ENST00000558253 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
SPG11-209ENST00000558253 PDE3BQ13370 1112 aa11.21□□□□□ -0.61
SPG11-209ENST00000558253 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
SPG11-209ENST00000558253 E9PCH4 1651 aa11.2□□□□□ -0.62
SPG11-209ENST00000558253 MLH3Q9UHC1 1453 aa11.2□□□□□ -0.62
SPG11-209ENST00000558253 PARD3Q8TEW0 1356 aa11.2□□□□□ -0.62
SPG11-209ENST00000558253 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
SPG11-209ENST00000558253 LHX8Q68G74 356 aa11.2□□□□□ -0.62
SPG11-209ENST00000558253 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
SPG11-209ENST00000558253 RNF17Q9BXT8 1623 aaKnown RBP11.2□□□□□ -0.62
SPG11-209ENST00000558253 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
SPG11-209ENST00000558253 KIAA1210Q9ULL0 1709 aa11.19□□□□□ -0.62
SPG11-209ENST00000558253 KIF3BO15066 747 aa11.19□□□□□ -0.62
SPG11-209ENST00000558253 PER1O15534 1290 aaPredicted RBP11.19□□□□□ -0.62
SPG11-209ENST00000558253 MYOM2P54296 1465 aa11.19□□□□□ -0.62
SPG11-209ENST00000558253 NEO1Q92859 1461 aa11.19□□□□□ -0.62
SPG11-209ENST00000558253 CD109Q6YHK3 1445 aa11.18□□□□□ -0.62
SPG11-209ENST00000558253 CEP152O94986 1710 aa11.18□□□□□ -0.62
SPG11-209ENST00000558253 SPHKAPQ2M3C7 1700 aa11.18□□□□□ -0.62
SPG11-209ENST00000558253 TSHZ2Q9NRE2 1034 aa11.18□□□□□ -0.62
SPG11-209ENST00000558253 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
SPG11-209ENST00000558253 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
SPG11-209ENST00000558253 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
SPG11-209ENST00000558253 MYT1LQ9UL68 1186 aa11.17□□□□□ -0.62
SPG11-209ENST00000558253 MADDQ8WXG6 1647 aa11.17□□□□□ -0.62
SPG11-209ENST00000558253 NPC1L1Q9UHC9 1359 aa11.16□□□□□ -0.62
SPG11-209ENST00000558253 RNF123Q5XPI4 1314 aa11.16□□□□□ -0.62
SPG11-209ENST00000558253 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
SPG11-209ENST00000558253 POGZQ7Z3K3 1410 aa11.16□□□□□ -0.62
SPG11-209ENST00000558253 EFCAB6Q5THR3 1501 aa11.15□□□□□ -0.62
SPG11-209ENST00000558253 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
SPG11-209ENST00000558253 CLTCL1P53675 1640 aa11.14□□□□□ -0.63
SPG11-209ENST00000558253 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
SPG11-209ENST00000558253 PANK3Q9H999 370 aa11.14□□□□□ -0.63
SPG11-209ENST00000558253 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
SPG11-209ENST00000558253 BCANQ96GW7 911 aa11.13□□□□□ -0.63
SPG11-209ENST00000558253 IQGAP1P46940 1657 aa11.13□□□□□ -0.63
SPG11-209ENST00000558253 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
SPG11-209ENST00000558253 SBNO2Q9Y2G9 1366 aa11.13□□□□□ -0.63
SPG11-209ENST00000558253 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
SPG11-209ENST00000558253 GSE1Q14687 1217 aa11.12□□□□□ -0.63
SPG11-209ENST00000558253 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
SPG11-209ENST00000558253 KNSTRNQ9Y448 316 aa11.12□□□□□ -0.63
SPG11-209ENST00000558253 KIDINS220Q9ULH0 1771 aa11.12□□□□□ -0.63
SPG11-209ENST00000558253 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
SPG11-209ENST00000558253 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
SPG11-209ENST00000558253 SYNMO15061 1565 aa11.11□□□□□ -0.63
SPG11-209ENST00000558253 HECW2Q9P2P5 1572 aa11.11□□□□□ -0.63
SPG11-209ENST00000558253 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms