RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GPATCH8Q9UKJ3 1502 aaKnown RBP11.17□□□□□ -0.62
SPTLC2-206ENST00000557566 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
SPTLC2-206ENST00000557566 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
SPTLC2-206ENST00000557566 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
SPTLC2-206ENST00000557566 DHX29Q7Z478 1369 aaKnown RBP11.15□□□□□ -0.63
SPTLC2-206ENST00000557566 WASHC2CQ9Y4E1 1318 aa11.14□□□□□ -0.63
SPTLC2-206ENST00000557566 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-206ENST00000557566 CFDP1Q9UEE9 299 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-206ENST00000557566 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
SPTLC2-206ENST00000557566 KIF3BO15066 747 aa11.13□□□□□ -0.63
SPTLC2-206ENST00000557566 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
SPTLC2-206ENST00000557566 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-206ENST00000557566 PHLPP1O60346 1717 aa11.12□□□□□ -0.63
SPTLC2-206ENST00000557566 RTEL1-TNFRSF6BF6WH68 1400 aa11.12□□□□□ -0.63
SPTLC2-206ENST00000557566 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
SPTLC2-206ENST00000557566 JCADQ9P266 1359 aa11.12□□□□□ -0.63
SPTLC2-206ENST00000557566 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
SPTLC2-206ENST00000557566 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
SPTLC2-206ENST00000557566 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
SPTLC2-206ENST00000557566 UBR1Q8IWV7 1749 aa11.11□□□□□ -0.63
SPTLC2-206ENST00000557566 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
SPTLC2-206ENST00000557566 CLCN6P51797 869 aa11.1□□□□□ -0.63
SPTLC2-206ENST00000557566 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
SPTLC2-206ENST00000557566 MEX3CQ5U5Q3 659 aaKnown RBP11.08□□□□□ -0.64
SPTLC2-206ENST00000557566 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
SPTLC2-206ENST00000557566 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
SPTLC2-206ENST00000557566 SLIT1O75093 1534 aa11.07□□□□□ -0.64
SPTLC2-206ENST00000557566 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 MAP3K1Q13233 1512 aa11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 CFAP65Q6ZU64 1925 aaKnown RBP11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 TXNDC2Q86VQ3 553 aa11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
SPTLC2-206ENST00000557566 RXRBP28702 533 aa11.05□□□□□ -0.64
SPTLC2-206ENST00000557566 LRP6O75581 1613 aa11.05□□□□□ -0.64
SPTLC2-206ENST00000557566 COL16A1Q07092 1604 aaPredicted RBP11.05□□□□□ -0.64
SPTLC2-206ENST00000557566 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
SPTLC2-206ENST00000557566 LTKP29376 864 aa11.04□□□□□ -0.64
SPTLC2-206ENST00000557566 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
SPTLC2-206ENST00000557566 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
SPTLC2-206ENST00000557566 ZNF644Q9H582 1327 aaPredicted RBP11.04□□□□□ -0.64
SPTLC2-206ENST00000557566 ABCC3O15438 1527 aa11.04□□□□□ -0.64
SPTLC2-206ENST00000557566 PROSER2Q86WR7 435 aaPredicted RBP11.03□□□□□ -0.64
SPTLC2-206ENST00000557566 CCDC141Q6ZP82 1450 aa11.03□□□□□ -0.64
SPTLC2-206ENST00000557566 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
SPTLC2-206ENST00000557566 MSH6P52701 1360 aa11.03□□□□□ -0.64
SPTLC2-206ENST00000557566 SHPRHQ149N8 1683 aa11.02□□□□□ -0.64
SPTLC2-206ENST00000557566 KCNA6P17658 529 aa11.02□□□□□ -0.65
SPTLC2-206ENST00000557566 PRDM15P57071 1507 aaPredicted RBP11.02□□□□□ -0.65
SPTLC2-206ENST00000557566 NKTRP30414 1462 aaKnown RBP11.01□□□□□ -0.65
SPTLC2-206ENST00000557566 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
SPTLC2-206ENST00000557566 SLAIN2Q9P270 581 aa11.01□□□□□ -0.65
SPTLC2-206ENST00000557566 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
SPTLC2-206ENST00000557566 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
SPTLC2-206ENST00000557566 CEP152O94986 1710 aa11□□□□□ -0.65
SPTLC2-206ENST00000557566 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
SPTLC2-206ENST00000557566 NWD1Q149M9 1564 aa10.99□□□□□ -0.65
SPTLC2-206ENST00000557566 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
SPTLC2-206ENST00000557566 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
SPTLC2-206ENST00000557566 TMEM2Q9UHN6 1383 aa10.98□□□□□ -0.65
SPTLC2-206ENST00000557566 CAMSAP2Q08AD1 1489 aa10.98□□□□□ -0.65
SPTLC2-206ENST00000557566 EIF2AK4Q9P2K8 1649 aaKnown RBP10.98□□□□□ -0.65
SPTLC2-206ENST00000557566 KDM5AP29375 1690 aaKnown RBP10.98□□□□□ -0.65
SPTLC2-206ENST00000557566 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
SPTLC2-206ENST00000557566 AHDC1Q5TGY3 1603 aaPredicted RBP10.96□□□□□ -0.65
SPTLC2-206ENST00000557566 RGS12O14924 1447 aa10.96□□□□□ -0.65
SPTLC2-206ENST00000557566 TET3O43151 1660 aa10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 NUTM2BA6NNL0 878 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 NUTM2EB1AL46 878 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 NUTM2DQ5VT03 806 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 NUTM2AQ8IVF1 878 aaPredicted RBP10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 SLC26A8Q96RN1 970 aa10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 MROH1Q8NDA8 1641 aa10.95□□□□□ -0.66
SPTLC2-206ENST00000557566 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 EP400Q96L91 3159 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 AFF2P51816 1311 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 EFCAB6Q5THR3 1501 aa10.94□□□□□ -0.66
SPTLC2-206ENST00000557566 ATAD2Q6PL18 1390 aa10.93□□□□□ -0.66
SPTLC2-206ENST00000557566 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
SPTLC2-206ENST00000557566 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
SPTLC2-206ENST00000557566 RBM6P78332 1123 aaKnown RBP10.93□□□□□ -0.66
SPTLC2-206ENST00000557566 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
SPTLC2-206ENST00000557566 ARHGAP31Q2M1Z3 1444 aa10.92□□□□□ -0.66
SPTLC2-206ENST00000557566 CEP162Q5TB80 1403 aa10.92□□□□□ -0.66
SPTLC2-206ENST00000557566 CHD2O14647 1828 aaKnown RBP10.92□□□□□ -0.66
SPTLC2-206ENST00000557566 DIP2AQ14689 1571 aa10.91□□□□□ -0.66
SPTLC2-206ENST00000557566 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.66
SPTLC2-206ENST00000557566 NCOA3Q9Y6Q9 1424 aa10.9□□□□□ -0.66
SPTLC2-206ENST00000557566 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.67
SPTLC2-206ENST00000557566 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
SPTLC2-206ENST00000557566 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
SPTLC2-206ENST00000557566 BCANQ96GW7 911 aa10.89□□□□□ -0.67
SPTLC2-206ENST00000557566 NGLY1Q96IV0 654 aa10.89□□□□□ -0.67
SPTLC2-206ENST00000557566 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms