RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
HNRNPC-228ENST00000557033 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
HNRNPC-228ENST00000557033 ZFP91Q96JP5 570 aaPredicted RBP15.22■□□□□ 0.03
HNRNPC-228ENST00000557033 STRCQ7RTU9 1775 aa15.21■□□□□ 0.03
HNRNPC-228ENST00000557033 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
HNRNPC-228ENST00000557033 PTPRTO14522 1441 aa15.18■□□□□ 0.02
HNRNPC-228ENST00000557033 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
HNRNPC-228ENST00000557033 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
HNRNPC-228ENST00000557033 ABCC5O15440 1437 aa15.17■□□□□ 0.02
HNRNPC-228ENST00000557033 TCOF1Q13428 1488 aaKnown RBP15.17■□□□□ 0.02
HNRNPC-228ENST00000557033 SHANK2Q9UPX8 1470 aa15.16■□□□□ 0.02
HNRNPC-228ENST00000557033 CERKQ8TCT0 537 aa15.16■□□□□ 0.02
HNRNPC-228ENST00000557033 EIF2AK4Q9P2K8 1649 aaKnown RBP15.16■□□□□ 0.02
HNRNPC-228ENST00000557033 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
HNRNPC-228ENST00000557033 NCOA1Q15788 1441 aa15.16■□□□□ 0.02
HNRNPC-228ENST00000557033 PZPP20742 1482 aa15.15■□□□□ 0.02
HNRNPC-228ENST00000557033 FBXO31Q5XUX0 539 aaPredicted RBP15.15■□□□□ 0.02
HNRNPC-228ENST00000557033 KCNV2Q8TDN2 545 aa15.15■□□□□ 0.02
HNRNPC-228ENST00000557033 WDR70Q9NW82 654 aa15.15■□□□□ 0.02
HNRNPC-228ENST00000557033 CAMSAP1Q5T5Y3 1602 aa15.14■□□□□ 0.01
HNRNPC-228ENST00000557033 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
HNRNPC-228ENST00000557033 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-228ENST00000557033 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
HNRNPC-228ENST00000557033 DAPK1P53355 1430 aa15.14■□□□□ 0.01
HNRNPC-228ENST00000557033 ZNF142P52746 1687 aaPredicted RBP15.13■□□□□ 0.01
HNRNPC-228ENST00000557033 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
HNRNPC-228ENST00000557033 CEP170BQ9Y4F5 1589 aaPredicted RBP15.13■□□□□ 0.01
HNRNPC-228ENST00000557033 DNMT1P26358 1616 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-228ENST00000557033 PLA2R1Q13018 1463 aa15.13■□□□□ 0.01
HNRNPC-228ENST00000557033 CROCC2H7BZ55 1655 aa15.12■□□□□ 0.01
HNRNPC-228ENST00000557033 TNRQ92752 1358 aa15.12■□□□□ 0.01
HNRNPC-228ENST00000557033 KIF15Q9NS87 1388 aa15.12■□□□□ 0.01
HNRNPC-228ENST00000557033 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
HNRNPC-228ENST00000557033 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
HNRNPC-228ENST00000557033 ERBINQ96RT1 1412 aa15.11■□□□□ 0.01
HNRNPC-228ENST00000557033 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-228ENST00000557033 ZC3H13Q5T200 1668 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-228ENST00000557033 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
HNRNPC-228ENST00000557033 ABCC3O15438 1527 aa15.09■□□□□ 0.01
HNRNPC-228ENST00000557033 CADPS2Q86UW7 1296 aa15.09■□□□□ 0.01
HNRNPC-228ENST00000557033 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
HNRNPC-228ENST00000557033 FAM50AQ14320 339 aaKnown RBP15.08■□□□□ 0
HNRNPC-228ENST00000557033 RASEFQ8IZ41 740 aa15.08■□□□□ 0
HNRNPC-228ENST00000557033 THEMISQ8N1K5 641 aaPredicted RBP15.08■□□□□ 0
HNRNPC-228ENST00000557033 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
HNRNPC-228ENST00000557033 NLRP1Q9C000 1473 aa15.08■□□□□ 0
HNRNPC-228ENST00000557033 MROH1Q8NDA8 1641 aa15.07■□□□□ 0
HNRNPC-228ENST00000557033 KANK1Q14678 1352 aa15.05■□□□□ -0
HNRNPC-228ENST00000557033 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
HNRNPC-228ENST00000557033 PRDM15P57071 1507 aaPredicted RBP15.04■□□□□ -0
HNRNPC-228ENST00000557033 ADGRL2O95490 1459 aa15.04■□□□□ -0
HNRNPC-228ENST00000557033 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
HNRNPC-228ENST00000557033 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
HNRNPC-228ENST00000557033 CEP152O94986 1710 aa15.03■□□□□ -0
HNRNPC-228ENST00000557033 DEPDC5O75140 1603 aa15.03■□□□□ -0
HNRNPC-228ENST00000557033 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
HNRNPC-228ENST00000557033 ERVK-7P63135 1459 aa15.02■□□□□ -0
HNRNPC-228ENST00000557033 PYGBP11216 843 aa15.02■□□□□ -0
HNRNPC-228ENST00000557033 UGGT1Q9NYU2 1555 aa15.02□□□□□ -0.01
HNRNPC-228ENST00000557033 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-228ENST00000557033 IQSEC2Q5JU85 1478 aa15.01□□□□□ -0.01
HNRNPC-228ENST00000557033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15□□□□□ -0.012e-10■□□□□ 8.9
HNRNPC-228ENST00000557033 LMTK2Q8IWU2 1503 aa14.99□□□□□ -0.01
HNRNPC-228ENST00000557033 ZC3H15Q8WU90 426 aaKnown RBP14.99□□□□□ -0.01
HNRNPC-228ENST00000557033 CFAP65Q6ZU64 1925 aaKnown RBP14.99□□□□□ -0.01
HNRNPC-228ENST00000557033 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
HNRNPC-228ENST00000557033 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
HNRNPC-228ENST00000557033 POLR1AO95602 1720 aaPredicted RBP14.98□□□□□ -0.01
HNRNPC-228ENST00000557033 VWDEQ8N2E2 1590 aa14.98□□□□□ -0.01
HNRNPC-228ENST00000557033 ROCK1Q13464 1354 aa14.97□□□□□ -0.01
HNRNPC-228ENST00000557033 MED14O60244 1454 aa14.96□□□□□ -0.01
HNRNPC-228ENST00000557033 NEURL4Q96JN8 1562 aa14.95□□□□□ -0.02
HNRNPC-228ENST00000557033 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
HNRNPC-228ENST00000557033 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
HNRNPC-228ENST00000557033 NEUROD2Q15784 382 aa14.94□□□□□ -0.02
HNRNPC-228ENST00000557033 ARHGEF1Q92888 912 aaKnown RBP14.94□□□□□ -0.02
HNRNPC-228ENST00000557033 NPHP4O75161 1426 aaPredicted RBP14.93□□□□□ -0.02
HNRNPC-228ENST00000557033 UBR1Q8IWV7 1749 aa14.93□□□□□ -0.02
HNRNPC-228ENST00000557033 IDI1Q13907 227 aa14.92□□□□□ -0.02
HNRNPC-228ENST00000557033 SLC52A1Q9NWF4 448 aa14.92□□□□□ -0.02
HNRNPC-228ENST00000557033 TXNDC2Q86VQ3 553 aa14.91□□□□□ -0.02
HNRNPC-228ENST00000557033 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
HNRNPC-228ENST00000557033 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
HNRNPC-228ENST00000557033 RPRD2Q5VT52 1461 aaKnown RBP14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 ITGAEP38570 1179 aa14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 SLC24A3Q9HC58 644 aa14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 SLIT1O75093 1534 aa14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 CPS1P31327 1500 aa14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 NOS1P29475 1434 aa14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 KDM5AP29375 1690 aaKnown RBP14.9□□□□□ -0.02
HNRNPC-228ENST00000557033 ARHGAP23Q9P227 1491 aa14.89□□□□□ -0.03
HNRNPC-228ENST00000557033 IQGAP1P46940 1657 aa14.89□□□□□ -0.03
HNRNPC-228ENST00000557033 LTKP29376 864 aa14.88□□□□□ -0.03
HNRNPC-228ENST00000557033 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
HNRNPC-228ENST00000557033 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
HNRNPC-228ENST00000557033 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
HNRNPC-228ENST00000557033 TMEM2Q9UHN6 1383 aa14.87□□□□□ -0.03
HNRNPC-228ENST00000557033 UNC13BO14795 1591 aa14.87□□□□□ -0.03
HNRNPC-228ENST00000557033 TET3O43151 1660 aa14.87□□□□□ -0.03
HNRNPC-228ENST00000557033 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms