RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
SPTB-208ENST00000556626 ANKRD30AQ9BXX3 1397 aa13.17□□□□□ -0.3
SPTB-208ENST00000556626 SOGA1O94964 1423 aa13.17□□□□□ -0.3
SPTB-208ENST00000556626 PLIN1O60240 522 aa13.17□□□□□ -0.3
SPTB-208ENST00000556626 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
SPTB-208ENST00000556626 LETM1O95202 739 aaPredicted RBP13.16□□□□□ -0.3
SPTB-208ENST00000556626 WIZO95785 1651 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 CUX2O14529 1486 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
SPTB-208ENST00000556626 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 STK26Q9P289 416 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 MYO6Q9UM54 1294 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 CCP110O43303 1012 aa13.16□□□□□ -0.3
SPTB-208ENST00000556626 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
SPTB-208ENST00000556626 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
SPTB-208ENST00000556626 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
SPTB-208ENST00000556626 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
SPTB-208ENST00000556626 SYNE3Q6ZMZ3 975 aa13.15□□□□□ -0.3
SPTB-208ENST00000556626 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
SPTB-208ENST00000556626 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
SPTB-208ENST00000556626 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
SPTB-208ENST00000556626 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
SPTB-208ENST00000556626 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
SPTB-208ENST00000556626 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
SPTB-208ENST00000556626 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
SPTB-208ENST00000556626 AAMPQ13685 434 aa13.12□□□□□ -0.31
SPTB-208ENST00000556626 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
SPTB-208ENST00000556626 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
SPTB-208ENST00000556626 ERCC6Q03468 1493 aa13.12□□□□□ -0.31
SPTB-208ENST00000556626 CPLX1O14810 134 aa13.12□□□□□ -0.31
SPTB-208ENST00000556626 SMC3Q9UQE7 1217 aa13.12□□□□□ -0.31
SPTB-208ENST00000556626 OLFM4Q6UX06 510 aa13.11□□□□□ -0.31
SPTB-208ENST00000556626 USP47Q96K76 1375 aa13.11□□□□□ -0.31
SPTB-208ENST00000556626 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
SPTB-208ENST00000556626 TCEAL9Q9UHQ7 104 aa13.1□□□□□ -0.31
SPTB-208ENST00000556626 TRAK2O60296 914 aa13.1□□□□□ -0.31
SPTB-208ENST00000556626 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
SPTB-208ENST00000556626 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
SPTB-208ENST00000556626 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
SPTB-208ENST00000556626 MBD3O95983 291 aa13.1□□□□□ -0.31
SPTB-208ENST00000556626 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
SPTB-208ENST00000556626 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
SPTB-208ENST00000556626 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
SPTB-208ENST00000556626 COG6Q9Y2V7 657 aa13.09□□□□□ -0.31
SPTB-208ENST00000556626 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
SPTB-208ENST00000556626 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
SPTB-208ENST00000556626 FRAT2O75474 233 aaPredicted RBP13.09□□□□□ -0.31
SPTB-208ENST00000556626 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
SPTB-208ENST00000556626 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
SPTB-208ENST00000556626 EPS15P42566 896 aa13.08□□□□□ -0.32
SPTB-208ENST00000556626 TRIM5Q9C035 493 aa13.08□□□□□ -0.32
SPTB-208ENST00000556626 KIAA0754O94854 1291 aa13.08□□□□□ -0.32
SPTB-208ENST00000556626 DHX8Q14562 1220 aaKnown RBP13.08□□□□□ -0.32
SPTB-208ENST00000556626 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
SPTB-208ENST00000556626 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
SPTB-208ENST00000556626 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
SPTB-208ENST00000556626 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
SPTB-208ENST00000556626 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
SPTB-208ENST00000556626 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
SPTB-208ENST00000556626 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
SPTB-208ENST00000556626 USP8P40818 1118 aa13.07□□□□□ -0.32
SPTB-208ENST00000556626 KANK4Q5T7N3 995 aaPredicted RBP13.07□□□□□ -0.32
SPTB-208ENST00000556626 CT47A1Q5JQC4 288 aaPredicted RBP13.07□□□□□ -0.32
SPTB-208ENST00000556626 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
SPTB-208ENST00000556626 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
SPTB-208ENST00000556626 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
SPTB-208ENST00000556626 TSPYL1Q9H0U9 437 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 TRDNQ13061 729 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
SPTB-208ENST00000556626 PDILTQ8N807 584 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 DEF6Q9H4E7 631 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
SPTB-208ENST00000556626 RBM10P98175 930 aaKnown RBP13.05□□□□□ -0.32
SPTB-208ENST00000556626 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPTB-208ENST00000556626 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 G3V3G9 751 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
SPTB-208ENST00000556626 CUX1P39880 1505 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 UQCRHP07919 91 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
SPTB-208ENST00000556626 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 PANK3Q9H999 370 aa13.04□□□□□ -0.32
SPTB-208ENST00000556626 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
SPTB-208ENST00000556626 CT47B1P0C2W7 299 aaPredicted RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
SPTB-208ENST00000556626 ZRSR2Q15696 482 aaKnown RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 RNF214Q8ND24 703 aa13.04□□□□□ -0.32
SPTB-208ENST00000556626 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
SPTB-208ENST00000556626 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 EIF3JO75822 258 aaKnown RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
SPTB-208ENST00000556626 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
SPTB-208ENST00000556626 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
SPTB-208ENST00000556626 AMPHP49418 695 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms