RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-204ENST00000555943 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-204ENST00000555943 TBC1D12O60347 775 aa11.87□□□□□ -0.51
SUPT16H-204ENST00000555943 EVI5O60447 810 aa11.87□□□□□ -0.51
SUPT16H-204ENST00000555943 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
SUPT16H-204ENST00000555943 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
SUPT16H-204ENST00000555943 NUP153P49790 1475 aaKnown RBP11.85□□□□□ -0.51
SUPT16H-204ENST00000555943 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
SUPT16H-204ENST00000555943 SLAIN1Q8ND83 568 aa11.85□□□□□ -0.51
SUPT16H-204ENST00000555943 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
SUPT16H-204ENST00000555943 NEO1Q92859 1461 aa11.84□□□□□ -0.51
SUPT16H-204ENST00000555943 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
SUPT16H-204ENST00000555943 PTGER2P43116 358 aa11.83□□□□□ -0.52
SUPT16H-204ENST00000555943 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
SUPT16H-204ENST00000555943 PLEKHD1A6NEE1 506 aa11.82□□□□□ -0.52
SUPT16H-204ENST00000555943 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
SUPT16H-204ENST00000555943 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
SUPT16H-204ENST00000555943 PCF11O94913 1555 aaKnown RBP11.81□□□□□ -0.52
SUPT16H-204ENST00000555943 DDX12PQ92771 950 aa11.81□□□□□ -0.52
SUPT16H-204ENST00000555943 HECW1Q76N89 1606 aa11.81□□□□□ -0.52
SUPT16H-204ENST00000555943 CFAP74Q9C0B2 1584 aa11.8□□□□□ -0.52
SUPT16H-204ENST00000555943 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-204ENST00000555943 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
SUPT16H-204ENST00000555943 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
SUPT16H-204ENST00000555943 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
SUPT16H-204ENST00000555943 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
SUPT16H-204ENST00000555943 OSBPP22059 807 aa11.79□□□□□ -0.52
SUPT16H-204ENST00000555943 ZMYND10O75800 440 aa11.77□□□□□ -0.53
SUPT16H-204ENST00000555943 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
SUPT16H-204ENST00000555943 PRIM1P49642 420 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-204ENST00000555943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
SUPT16H-204ENST00000555943 FBXO41Q8TF61 875 aa11.74□□□□□ -0.53
SUPT16H-204ENST00000555943 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
SUPT16H-204ENST00000555943 FANCAO15360 1455 aa11.74□□□□□ -0.53
SUPT16H-204ENST00000555943 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
SUPT16H-204ENST00000555943 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
SUPT16H-204ENST00000555943 FRMPD1Q5SYB0 1578 aa11.73□□□□□ -0.53
SUPT16H-204ENST00000555943 BARGINQ6ZT62 677 aa11.73□□□□□ -0.53
SUPT16H-204ENST00000555943 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 AKNAQ7Z591 1439 aa11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 GPR37O15354 613 aa11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 RAPGEF3O95398 923 aa11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
SUPT16H-204ENST00000555943 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.53
SUPT16H-204ENST00000555943 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
SUPT16H-204ENST00000555943 ARSIQ5FYB1 569 aa11.71□□□□□ -0.53
SUPT16H-204ENST00000555943 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
SUPT16H-204ENST00000555943 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.54
SUPT16H-204ENST00000555943 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
SUPT16H-204ENST00000555943 ARHGEF40Q8TER5 1519 aa11.7□□□□□ -0.54
SUPT16H-204ENST00000555943 PHF14O94880 888 aa11.7□□□□□ -0.54
SUPT16H-204ENST00000555943 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
SUPT16H-204ENST00000555943 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
SUPT16H-204ENST00000555943 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
SUPT16H-204ENST00000555943 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
SUPT16H-204ENST00000555943 PLCH2O75038 1416 aa11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 NUDT7P0C024 238 aa11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 GPR153Q6NV75 609 aa11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-204ENST00000555943 KIF14Q15058 1648 aa11.68□□□□□ -0.54
SUPT16H-204ENST00000555943 EPAS1Q99814 870 aa11.68□□□□□ -0.54
SUPT16H-204ENST00000555943 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
SUPT16H-204ENST00000555943 PTPRMP28827 1452 aa11.68□□□□□ -0.54
SUPT16H-204ENST00000555943 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
SUPT16H-204ENST00000555943 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
SUPT16H-204ENST00000555943 POGZQ7Z3K3 1410 aa11.67□□□□□ -0.54
SUPT16H-204ENST00000555943 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
SUPT16H-204ENST00000555943 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
SUPT16H-204ENST00000555943 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
SUPT16H-204ENST00000555943 EN1Q05925 392 aaPredicted RBP11.65□□□□□ -0.54
SUPT16H-204ENST00000555943 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
SUPT16H-204ENST00000555943 LHX8Q68G74 356 aa11.65□□□□□ -0.54
SUPT16H-204ENST00000555943 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.55
SUPT16H-204ENST00000555943 SNPHO15079 494 aa11.64□□□□□ -0.55
SUPT16H-204ENST00000555943 FOSBP53539 338 aa11.64□□□□□ -0.55
SUPT16H-204ENST00000555943 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
SUPT16H-204ENST00000555943 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
SUPT16H-204ENST00000555943 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
SUPT16H-204ENST00000555943 FCHSD2O94868 740 aa11.63□□□□□ -0.55
SUPT16H-204ENST00000555943 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-204ENST00000555943 MADDQ8WXG6 1647 aa11.63□□□□□ -0.55
SUPT16H-204ENST00000555943 MAP3K7O43318 606 aa11.62□□□□□ -0.55
SUPT16H-204ENST00000555943 CDHR5Q9HBB8 845 aa11.62□□□□□ -0.55
SUPT16H-204ENST00000555943 CCNB3Q8WWL7 1395 aa11.62□□□□□ -0.55
SUPT16H-204ENST00000555943 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
SUPT16H-204ENST00000555943 PTGDRQ13258 359 aa11.61□□□□□ -0.55
SUPT16H-204ENST00000555943 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
SUPT16H-204ENST00000555943 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
SUPT16H-204ENST00000555943 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
SUPT16H-204ENST00000555943 LMTK3Q96Q04 1460 aa11.61□□□□□ -0.55
SUPT16H-204ENST00000555943 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
SUPT16H-204ENST00000555943 GNPATO15228 680 aa11.6□□□□□ -0.55
SUPT16H-204ENST00000555943 HIC1Q14526 733 aa11.6□□□□□ -0.55
SUPT16H-204ENST00000555943 TSR1Q2NL82 804 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms