RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 LRRC9Q6ZRR7 1453 aa9.99□□□□□ -0.81
TGFB3-202ENST00000554980 NEFMP07197 916 aa9.99□□□□□ -0.81
TGFB3-202ENST00000554980 MFAP1P55081 439 aaKnown RBP9.98□□□□□ -0.81
TGFB3-202ENST00000554980 MBD5Q9P267 1494 aa9.98□□□□□ -0.81
TGFB3-202ENST00000554980 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
TGFB3-202ENST00000554980 SPAG9O60271 1321 aaKnown RBP9.97□□□□□ -0.81
TGFB3-202ENST00000554980 APBB1O00213 710 aa9.97□□□□□ -0.81
TGFB3-202ENST00000554980 TMCO4Q5TGY1 634 aa9.96□□□□□ -0.81
TGFB3-202ENST00000554980 SUPT6HQ7KZ85 1726 aaKnown RBP9.96□□□□□ -0.82
TGFB3-202ENST00000554980 KIAA1107Q9UPP5 1409 aa9.96□□□□□ -0.82
TGFB3-202ENST00000554980 E9PSI1 815 aa9.96□□□□□ -0.82
TGFB3-202ENST00000554980 HSPA2P54652 639 aa9.96□□□□□ -0.82
TGFB3-202ENST00000554980 OS9Q13438 667 aaPredicted RBP9.96□□□□□ -0.82
TGFB3-202ENST00000554980 CCDC125Q86Z20 511 aa9.96□□□□□ -0.82
TGFB3-202ENST00000554980 FER1L4A9Z1Z3 1794 aa9.95□□□□□ -0.82
TGFB3-202ENST00000554980 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
TGFB3-202ENST00000554980 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
TGFB3-202ENST00000554980 CAMSAP2Q08AD1 1489 aa9.94□□□□□ -0.82
TGFB3-202ENST00000554980 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
TGFB3-202ENST00000554980 FAM193AP78312 1265 aa9.94□□□□□ -0.82
TGFB3-202ENST00000554980 LMTK3Q96Q04 1460 aa9.94□□□□□ -0.82
TGFB3-202ENST00000554980 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
TGFB3-202ENST00000554980 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
TGFB3-202ENST00000554980 REREQ9P2R6 1566 aa9.92□□□□□ -0.82
TGFB3-202ENST00000554980 PLEKHH2Q8IVE3 1493 aa9.92□□□□□ -0.82
TGFB3-202ENST00000554980 EXOC8Q8IYI6 725 aa9.91□□□□□ -0.82
TGFB3-202ENST00000554980 MAP3K1Q13233 1512 aa9.91□□□□□ -0.82
TGFB3-202ENST00000554980 AGLP35573 1532 aa9.91□□□□□ -0.82
TGFB3-202ENST00000554980 GGT6Q6P531 493 aa9.91□□□□□ -0.82
TGFB3-202ENST00000554980 A2MP01023 1474 aa9.9□□□□□ -0.82
TGFB3-202ENST00000554980 HSP90AB4PQ58FF6 505 aa9.9□□□□□ -0.82
TGFB3-202ENST00000554980 TMTC2Q8N394 836 aa9.9□□□□□ -0.82
TGFB3-202ENST00000554980 PLXNC1O60486 1568 aa9.9□□□□□ -0.83
TGFB3-202ENST00000554980 LOC102724159A0A0B4J2E5 919 aa9.9□□□□□ -0.83
TGFB3-202ENST00000554980 PWP2Q15269 919 aaKnown RBP9.9□□□□□ -0.83
TGFB3-202ENST00000554980 FAM50AQ14320 339 aaKnown RBP9.89□□□□□ -0.83
TGFB3-202ENST00000554980 MYOM3Q5VTT5 1437 aa9.89□□□□□ -0.83
TGFB3-202ENST00000554980 LAS1LQ9Y4W2 734 aaKnown RBP9.89□□□□□ -0.83
TGFB3-202ENST00000554980 CCDC141Q6ZP82 1450 aa9.88□□□□□ -0.83
TGFB3-202ENST00000554980 C3P01024 1663 aa9.88□□□□□ -0.83
TGFB3-202ENST00000554980 ADGBQ8N7X0 1667 aa9.88□□□□□ -0.83
TGFB3-202ENST00000554980 ZNF316A6NFI3 1004 aaPredicted RBP9.87□□□□□ -0.83
TGFB3-202ENST00000554980 PATL2C9JE40 543 aaKnown RBP9.87□□□□□ -0.83
TGFB3-202ENST00000554980 SGSM3Q96HU1 749 aa9.87□□□□□ -0.83
TGFB3-202ENST00000554980 RTEL1-TNFRSF6BF6WH68 1400 aa9.86□□□□□ -0.83
TGFB3-202ENST00000554980 KIF3BO15066 747 aa9.86□□□□□ -0.83
TGFB3-202ENST00000554980 STAC3Q96MF2 364 aa9.86□□□□□ -0.83
TGFB3-202ENST00000554980 CANXP27824 592 aaKnown RBP9.86□□□□□ -0.83
TGFB3-202ENST00000554980 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
TGFB3-202ENST00000554980 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
TGFB3-202ENST00000554980 CLTCQ00610 1675 aaKnown RBP9.85□□□□□ -0.83
TGFB3-202ENST00000554980 PHF14O94880 888 aa9.85□□□□□ -0.83
TGFB3-202ENST00000554980 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
TGFB3-202ENST00000554980 RIPOR2Q9Y4F9 1068 aa9.85□□□□□ -0.83
TGFB3-202ENST00000554980 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
TGFB3-202ENST00000554980 TSPY4P0CV99 314 aa9.84□□□□□ -0.83
TGFB3-202ENST00000554980 TSPY10P0CW01 314 aa9.84□□□□□ -0.83
TGFB3-202ENST00000554980 ESF1Q9H501 851 aaKnown RBP9.84□□□□□ -0.83
TGFB3-202ENST00000554980 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
TGFB3-202ENST00000554980 CLGNO14967 610 aa9.84□□□□□ -0.84
TGFB3-202ENST00000554980 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.84
TGFB3-202ENST00000554980 GZF1Q9H116 711 aaPredicted RBP9.84□□□□□ -0.84
TGFB3-202ENST00000554980 CHIC2Q9UKJ5 165 aa9.84□□□□□ -0.84
TGFB3-202ENST00000554980 PTPN23Q9H3S7 1636 aa9.83□□□□□ -0.84
TGFB3-202ENST00000554980 ABCC5O15440 1437 aa9.83□□□□□ -0.84
TGFB3-202ENST00000554980 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
TGFB3-202ENST00000554980 FGD6Q6ZV73 1430 aa9.83□□□□□ -0.84
TGFB3-202ENST00000554980 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
TGFB3-202ENST00000554980 RRP7BPQ9NSQ0 103 aa9.83□□□□□ -0.84
TGFB3-202ENST00000554980 BRD1O95696 1058 aa9.82□□□□□ -0.84
TGFB3-202ENST00000554980 PREX1Q8TCU6 1659 aa9.82□□□□□ -0.84
TGFB3-202ENST00000554980 CNGB1Q14028 1251 aaPredicted RBP9.82□□□□□ -0.84
TGFB3-202ENST00000554980 ILDR1Q86SU0 546 aaPredicted RBP9.82□□□□□ -0.84
TGFB3-202ENST00000554980 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
TGFB3-202ENST00000554980 STRCQ7RTU9 1775 aa9.8□□□□□ -0.84
TGFB3-202ENST00000554980 DAPK1P53355 1430 aa9.8□□□□□ -0.84
TGFB3-202ENST00000554980 PTPRKQ15262 1439 aa9.8□□□□□ -0.84
TGFB3-202ENST00000554980 UHRF1BP1Q6BDS2 1440 aa9.8□□□□□ -0.84
TGFB3-202ENST00000554980 CNTLNQ9NXG0 1405 aa9.8□□□□□ -0.84
TGFB3-202ENST00000554980 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
TGFB3-202ENST00000554980 ZNF622Q969S3 477 aaKnown RBP eCLIP9.8□□□□□ -0.84
TGFB3-202ENST00000554980 TCOF1Q13428 1488 aaKnown RBP9.8□□□□□ -0.84
TGFB3-202ENST00000554980 MAST1Q9Y2H9 1570 aa9.79□□□□□ -0.84
TGFB3-202ENST00000554980 PPP4R3CPQ6ZMV5 832 aa9.79□□□□□ -0.84
TGFB3-202ENST00000554980 MROH2AA6NES4 1674 aa9.79□□□□□ -0.84
TGFB3-202ENST00000554980 FOXD1Q16676 465 aa9.79□□□□□ -0.84
TGFB3-202ENST00000554980 WASHC2CQ9Y4E1 1318 aa9.78□□□□□ -0.84
TGFB3-202ENST00000554980 MMP14P50281 582 aa9.78□□□□□ -0.84
TGFB3-202ENST00000554980 SPTY2D1Q68D10 685 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-202ENST00000554980 CROCC2H7BZ55 1655 aa9.78□□□□□ -0.84
TGFB3-202ENST00000554980 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
TGFB3-202ENST00000554980 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
TGFB3-202ENST00000554980 KIF15Q9NS87 1388 aa9.77□□□□□ -0.84
TGFB3-202ENST00000554980 YTHDC1Q96MU7 727 aaKnown RBP9.77□□□□□ -0.84
TGFB3-202ENST00000554980 VGFO15240 615 aaPredicted RBP9.77□□□□□ -0.85
TGFB3-202ENST00000554980 FOXD4L6Q3SYB3 417 aaPredicted RBP9.76□□□□□ -0.85
TGFB3-202ENST00000554980 FOXD4L3Q6VB84 417 aaPredicted RBP9.76□□□□□ -0.85
TGFB3-202ENST00000554980 NPATQ14207 1427 aa9.76□□□□□ -0.85
TGFB3-202ENST00000554980 NCKAP5LQ9HCH0 1330 aa9.76□□□□□ -0.85
TGFB3-202ENST00000554980 CFAP65Q6ZU64 1925 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms