RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 CENPJQ9HC77 1338 aaPredicted RBP15.31■□□□□ 0.04
XRCC3-208ENST00000554811 UHRF1BP1Q6BDS2 1440 aa15.31■□□□□ 0.04
XRCC3-208ENST00000554811 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
XRCC3-208ENST00000554811 NFKBIBQ15653 356 aa15.3■□□□□ 0.04
XRCC3-208ENST00000554811 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
XRCC3-208ENST00000554811 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
XRCC3-208ENST00000554811 KANK1Q14678 1352 aa15.29■□□□□ 0.04
XRCC3-208ENST00000554811 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
XRCC3-208ENST00000554811 TNNQ9UQP3 1299 aa15.28■□□□□ 0.04
XRCC3-208ENST00000554811 ADGBQ8N7X0 1667 aa15.28■□□□□ 0.04
XRCC3-208ENST00000554811 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
XRCC3-208ENST00000554811 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
XRCC3-208ENST00000554811 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
XRCC3-208ENST00000554811 UPF2Q9HAU5 1272 aaKnown RBP15.27■□□□□ 0.03
XRCC3-208ENST00000554811 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
XRCC3-208ENST00000554811 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
XRCC3-208ENST00000554811 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
XRCC3-208ENST00000554811 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
XRCC3-208ENST00000554811 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
XRCC3-208ENST00000554811 IGHDP01880 384 aa15.25■□□□□ 0.03
XRCC3-208ENST00000554811 MTHFSP49914 203 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 CDC42BPAQ5VT25 1732 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 CFAP53Q96M91 514 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 PLA2R1Q13018 1463 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 TRAPPC8Q9Y2L5 1435 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 E9PSI1 815 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 TCP11L2Q8N4U5 519 aa15.24■□□□□ 0.03
XRCC3-208ENST00000554811 ARHGEF12Q9NZN5 1544 aa15.23■□□□□ 0.03
XRCC3-208ENST00000554811 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
XRCC3-208ENST00000554811 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
XRCC3-208ENST00000554811 NUP160Q12769 1436 aa15.23■□□□□ 0.03
XRCC3-208ENST00000554811 WASHC2CQ9Y4E1 1318 aa15.22■□□□□ 0.03
XRCC3-208ENST00000554811 CARD14Q9BXL6 1004 aa15.22■□□□□ 0.03
XRCC3-208ENST00000554811 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
XRCC3-208ENST00000554811 COL17A1Q9UMD9 1497 aaPredicted RBP15.22■□□□□ 0.03
XRCC3-208ENST00000554811 GGNBP2Q9H3C7 697 aa15.21■□□□□ 0.03
XRCC3-208ENST00000554811 GSE1Q14687 1217 aa15.21■□□□□ 0.03
XRCC3-208ENST00000554811 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.02
XRCC3-208ENST00000554811 MFAP1P55081 439 aaKnown RBP15.21■□□□□ 0.02
XRCC3-208ENST00000554811 ITPRIPQ8IWB1 547 aa15.21■□□□□ 0.02
XRCC3-208ENST00000554811 SAMD9LQ8IVG5 1584 aa15.2■□□□□ 0.02
XRCC3-208ENST00000554811 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
XRCC3-208ENST00000554811 POGKQ9P215 609 aa15.2■□□□□ 0.02
XRCC3-208ENST00000554811 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
XRCC3-208ENST00000554811 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
XRCC3-208ENST00000554811 MINK1Q8N4C8 1332 aaPredicted RBP15.19■□□□□ 0.02
XRCC3-208ENST00000554811 SHANK2Q9UPX8 1470 aa15.19■□□□□ 0.02
XRCC3-208ENST00000554811 WWC1Q8IX03 1113 aa15.19■□□□□ 0.02
XRCC3-208ENST00000554811 SEC24BO95487 1268 aa15.19■□□□□ 0.02
XRCC3-208ENST00000554811 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
XRCC3-208ENST00000554811 CFAP65Q6ZU64 1925 aaKnown RBP15.18■□□□□ 0.02
XRCC3-208ENST00000554811 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
XRCC3-208ENST00000554811 SOX12O15370 315 aa15.18■□□□□ 0.02
XRCC3-208ENST00000554811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
XRCC3-208ENST00000554811 MLECQ14165 292 aa15.18■□□□□ 0.02
XRCC3-208ENST00000554811 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
XRCC3-208ENST00000554811 BECN1Q14457 450 aa15.17■□□□□ 0.02
XRCC3-208ENST00000554811 FBLN1P23142 703 aa15.16■□□□□ 0.02
XRCC3-208ENST00000554811 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
XRCC3-208ENST00000554811 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
XRCC3-208ENST00000554811 ABCA8O94911 1581 aa15.15■□□□□ 0.02
XRCC3-208ENST00000554811 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
XRCC3-208ENST00000554811 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
XRCC3-208ENST00000554811 RLBP1P12271 317 aa15.14■□□□□ 0.01
XRCC3-208ENST00000554811 CGNL1Q0VF96 1302 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 APBB1O00213 710 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 RUNDC1Q96C34 613 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 POLR1AO95602 1720 aaPredicted RBP15.13■□□□□ 0.01
XRCC3-208ENST00000554811 RAPGEF3O95398 923 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 PDZRN3Q9UPQ7 1066 aa15.13■□□□□ 0.01
XRCC3-208ENST00000554811 KDM2BQ8NHM5 1336 aa15.12■□□□□ 0.01
XRCC3-208ENST00000554811 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
XRCC3-208ENST00000554811 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
XRCC3-208ENST00000554811 BLMP54132 1417 aaPredicted RBP15.11■□□□□ 0.01
XRCC3-208ENST00000554811 PCDHB15Q9Y5E8 787 aa15.11■□□□□ 0.01
XRCC3-208ENST00000554811 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
XRCC3-208ENST00000554811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.11■□□□□ 0.01
XRCC3-208ENST00000554811 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
XRCC3-208ENST00000554811 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
XRCC3-208ENST00000554811 RWDD1Q9H446 243 aaPredicted RBP15.1■□□□□ 0.01
XRCC3-208ENST00000554811 HMOX1P09601 288 aa15.09■□□□□ 0.01
XRCC3-208ENST00000554811 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
XRCC3-208ENST00000554811 RARSP54136 660 aaKnown RBP15.08■□□□□ 0.01
XRCC3-208ENST00000554811 MYH16Q9H6N6 1097 aa15.08■□□□□ 0.01
XRCC3-208ENST00000554811 ZMYM4Q5VZL5 1548 aa15.08■□□□□ 0.01
XRCC3-208ENST00000554811 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0
XRCC3-208ENST00000554811 WDR7Q9Y4E6 1490 aa15.08■□□□□ 0
XRCC3-208ENST00000554811 C1orf115Q9H7X2 142 aa15.08■□□□□ 0
XRCC3-208ENST00000554811 NOS1P29475 1434 aa15.08■□□□□ 0
XRCC3-208ENST00000554811 PMFBP1Q8TBY8 1022 aa15.07■□□□□ 0
XRCC3-208ENST00000554811 THUMPD2Q9BTF0 503 aaKnown RBP15.07■□□□□ 0
XRCC3-208ENST00000554811 LNPKQ9C0E8 428 aa15.07■□□□□ 0
XRCC3-208ENST00000554811 CDC42BPBQ9Y5S2 1711 aa15.07■□□□□ 0
XRCC3-208ENST00000554811 PLCH2O75038 1416 aa15.07■□□□□ 0
XRCC3-208ENST00000554811 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
XRCC3-208ENST00000554811 RIPK4P57078 832 aa15.06■□□□□ 0
XRCC3-208ENST00000554811 ZKSCAN2Q63HK3 967 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms