RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 NLRP1Q9C000 1473 aa15.61■□□□□ 0.09
PSMC1-204ENST00000554624 TOM1O60784 492 aa15.61■□□□□ 0.09
PSMC1-204ENST00000554624 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
PSMC1-204ENST00000554624 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
PSMC1-204ENST00000554624 DNMT1P26358 1616 aaKnown RBP15.6■□□□□ 0.09
PSMC1-204ENST00000554624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.6■□□□□ 0.09
PSMC1-204ENST00000554624 ILDR2Q71H61 639 aa15.59■□□□□ 0.09
PSMC1-204ENST00000554624 SOCS7O14512 581 aa15.58■□□□□ 0.08
PSMC1-204ENST00000554624 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
PSMC1-204ENST00000554624 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
PSMC1-204ENST00000554624 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
PSMC1-204ENST00000554624 SHANK2Q9UPX8 1470 aa15.55■□□□□ 0.08
PSMC1-204ENST00000554624 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
PSMC1-204ENST00000554624 UGGT1Q9NYU2 1555 aa15.53■□□□□ 0.08
PSMC1-204ENST00000554624 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
PSMC1-204ENST00000554624 CPS1P31327 1500 aa15.53■□□□□ 0.08
PSMC1-204ENST00000554624 MED14O60244 1454 aa15.53■□□□□ 0.08
PSMC1-204ENST00000554624 NPHP4O75161 1426 aaPredicted RBP15.53■□□□□ 0.08
PSMC1-204ENST00000554624 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
PSMC1-204ENST00000554624 RGL2O15211 777 aa15.51■□□□□ 0.07
PSMC1-204ENST00000554624 KIF15Q9NS87 1388 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 ABCC3O15438 1527 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 DUOX2Q9NRD8 1548 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 PYGBP11216 843 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 TXNDC2Q86VQ3 553 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 EID1Q9Y6B2 187 aa15.5■□□□□ 0.07
PSMC1-204ENST00000554624 HSPA1LP34931 641 aa15.49■□□□□ 0.07
PSMC1-204ENST00000554624 ABCC5O15440 1437 aa15.49■□□□□ 0.07
PSMC1-204ENST00000554624 ARHGAP31Q2M1Z3 1444 aa15.49■□□□□ 0.07
PSMC1-204ENST00000554624 KANK1Q14678 1352 aa15.49■□□□□ 0.07
PSMC1-204ENST00000554624 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
PSMC1-204ENST00000554624 POTEHQ6S545 545 aa15.48■□□□□ 0.07
PSMC1-204ENST00000554624 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
PSMC1-204ENST00000554624 ERVK-7P63135 1459 aa15.47■□□□□ 0.07
PSMC1-204ENST00000554624 SPATA31D1Q6ZQQ2 1576 aa15.47■□□□□ 0.07
PSMC1-204ENST00000554624 NEURL4Q96JN8 1562 aa15.47■□□□□ 0.07
PSMC1-204ENST00000554624 DEPDC5O75140 1603 aa15.46■□□□□ 0.07
PSMC1-204ENST00000554624 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.07
PSMC1-204ENST00000554624 ERBINQ96RT1 1412 aa15.46■□□□□ 0.07
PSMC1-204ENST00000554624 LTKP29376 864 aa15.46■□□□□ 0.07
PSMC1-204ENST00000554624 ANKRD30AQ9BXX3 1397 aa15.46■□□□□ 0.07
PSMC1-204ENST00000554624 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
PSMC1-204ENST00000554624 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
PSMC1-204ENST00000554624 SGIP1Q9BQI5 828 aa15.44■□□□□ 0.06
PSMC1-204ENST00000554624 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
PSMC1-204ENST00000554624 HAX1O00165 279 aa15.43■□□□□ 0.06
PSMC1-204ENST00000554624 RNF25Q96BH1 459 aaPredicted RBP15.43■□□□□ 0.06
PSMC1-204ENST00000554624 DAPK1P53355 1430 aa15.43■□□□□ 0.06
PSMC1-204ENST00000554624 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
PSMC1-204ENST00000554624 VWDEQ8N2E2 1590 aa15.42■□□□□ 0.06
PSMC1-204ENST00000554624 IDI1Q13907 227 aa15.42■□□□□ 0.06
PSMC1-204ENST00000554624 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
PSMC1-204ENST00000554624 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
PSMC1-204ENST00000554624 POLR1AO95602 1720 aaPredicted RBP15.42■□□□□ 0.06
PSMC1-204ENST00000554624 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
PSMC1-204ENST00000554624 ZNF467Q7Z7K2 595 aaPredicted RBP15.41■□□□□ 0.06
PSMC1-204ENST00000554624 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
PSMC1-204ENST00000554624 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
PSMC1-204ENST00000554624 HDGFP51858 240 aaKnown RBP15.39■□□□□ 0.05
PSMC1-204ENST00000554624 KIF12Q96FN5 646 aa15.39■□□□□ 0.05
PSMC1-204ENST00000554624 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
PSMC1-204ENST00000554624 PTPN23Q9H3S7 1636 aa15.39■□□□□ 0.05
PSMC1-204ENST00000554624 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
PSMC1-204ENST00000554624 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
PSMC1-204ENST00000554624 SLIT1O75093 1534 aa15.38■□□□□ 0.05
PSMC1-204ENST00000554624 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
PSMC1-204ENST00000554624 IQGAP1P46940 1657 aa15.37■□□□□ 0.05
PSMC1-204ENST00000554624 PRDM15P57071 1507 aaPredicted RBP15.37■□□□□ 0.05
PSMC1-204ENST00000554624 KCNA6P17658 529 aa15.36■□□□□ 0.05
PSMC1-204ENST00000554624 CLCN6P51797 869 aa15.35■□□□□ 0.05
PSMC1-204ENST00000554624 LMTK2Q8IWU2 1503 aa15.34■□□□□ 0.05
PSMC1-204ENST00000554624 PCDHB13Q9Y5F0 798 aa15.33■□□□□ 0.04
PSMC1-204ENST00000554624 UBR1Q8IWV7 1749 aa15.32■□□□□ 0.04
PSMC1-204ENST00000554624 MAP3K13O43283 966 aa15.32■□□□□ 0.04
PSMC1-204ENST00000554624 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
PSMC1-204ENST00000554624 BCANQ96GW7 911 aa15.32■□□□□ 0.04
PSMC1-204ENST00000554624 PHF12Q96QT6 1004 aa15.32■□□□□ 0.04
PSMC1-204ENST00000554624 SLC26A8Q96RN1 970 aa15.32■□□□□ 0.04
PSMC1-204ENST00000554624 NOS1P29475 1434 aa15.32■□□□□ 0.04
PSMC1-204ENST00000554624 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
PSMC1-204ENST00000554624 CEP152O94986 1710 aa15.31■□□□□ 0.04
PSMC1-204ENST00000554624 ADGRL2O95490 1459 aa15.3■□□□□ 0.04
PSMC1-204ENST00000554624 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
PSMC1-204ENST00000554624 EFCAB6Q5THR3 1501 aa15.29■□□□□ 0.04
PSMC1-204ENST00000554624 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
PSMC1-204ENST00000554624 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
PSMC1-204ENST00000554624 CROCC2H7BZ55 1655 aa15.28■□□□□ 0.04
PSMC1-204ENST00000554624 ALKQ9UM73 1620 aa15.28■□□□□ 0.04
PSMC1-204ENST00000554624 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.04
PSMC1-204ENST00000554624 TMEM94Q12767 1356 aa15.27■□□□□ 0.04
PSMC1-204ENST00000554624 HS6ST3Q8IZP7 471 aa15.27■□□□□ 0.04
PSMC1-204ENST00000554624 SYNMO15061 1565 aa15.27■□□□□ 0.03
PSMC1-204ENST00000554624 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
PSMC1-204ENST00000554624 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
PSMC1-204ENST00000554624 TBX22Q9Y458 520 aa15.26■□□□□ 0.03
PSMC1-204ENST00000554624 KDM5AP29375 1690 aaKnown RBP15.25■□□□□ 0.03
PSMC1-204ENST00000554624 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
PSMC1-204ENST00000554624 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
PSMC1-204ENST00000554624 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms