RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 UHRF1BP1Q6BDS2 1440 aa14.76□□□□□ -0.05
PTPN21-205ENST00000554270 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
PTPN21-205ENST00000554270 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
PTPN21-205ENST00000554270 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
PTPN21-205ENST00000554270 A2MP01023 1474 aa14.75□□□□□ -0.05
PTPN21-205ENST00000554270 ABCC10Q5T3U5 1492 aa14.75□□□□□ -0.05
PTPN21-205ENST00000554270 CENPQQ7L2Z9 268 aaPredicted RBP14.75□□□□□ -0.05
PTPN21-205ENST00000554270 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
PTPN21-205ENST00000554270 GZF1Q9H116 711 aaPredicted RBP14.74□□□□□ -0.05
PTPN21-205ENST00000554270 DUSP27Q5VZP5 1158 aa14.74□□□□□ -0.05
PTPN21-205ENST00000554270 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
PTPN21-205ENST00000554270 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
PTPN21-205ENST00000554270 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
PTPN21-205ENST00000554270 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
PTPN21-205ENST00000554270 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
PTPN21-205ENST00000554270 GSE1Q14687 1217 aa14.72□□□□□ -0.05
PTPN21-205ENST00000554270 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
PTPN21-205ENST00000554270 CENPJQ9HC77 1338 aaPredicted RBP14.71□□□□□ -0.06
PTPN21-205ENST00000554270 WASHC2CQ9Y4E1 1318 aa14.71□□□□□ -0.06
PTPN21-205ENST00000554270 PLA2R1Q13018 1463 aa14.7□□□□□ -0.06
PTPN21-205ENST00000554270 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
PTPN21-205ENST00000554270 MTHFSP49914 203 aa14.69□□□□□ -0.06
PTPN21-205ENST00000554270 CFAP53Q96M91 514 aa14.68□□□□□ -0.06
PTPN21-205ENST00000554270 SLFN5Q08AF3 891 aa14.68□□□□□ -0.06
PTPN21-205ENST00000554270 MLECQ14165 292 aa14.68□□□□□ -0.06
PTPN21-205ENST00000554270 BECN1Q14457 450 aa14.68□□□□□ -0.06
PTPN21-205ENST00000554270 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
PTPN21-205ENST00000554270 TCP11L2Q8N4U5 519 aa14.67□□□□□ -0.06
PTPN21-205ENST00000554270 CARD14Q9BXL6 1004 aa14.67□□□□□ -0.06
PTPN21-205ENST00000554270 POGKQ9P215 609 aa14.67□□□□□ -0.06
PTPN21-205ENST00000554270 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
PTPN21-205ENST00000554270 EIF3AQ14152 1382 aaKnown RBP14.67□□□□□ -0.06
PTPN21-205ENST00000554270 ADGBQ8N7X0 1667 aa14.67□□□□□ -0.06
PTPN21-205ENST00000554270 ARHGEF12Q9NZN5 1544 aa14.67□□□□□ -0.06
PTPN21-205ENST00000554270 CDC42BPAQ5VT25 1732 aa14.66□□□□□ -0.06
PTPN21-205ENST00000554270 SHANK2Q9UPX8 1470 aa14.66□□□□□ -0.06
PTPN21-205ENST00000554270 E9PSI1 815 aa14.66□□□□□ -0.06
PTPN21-205ENST00000554270 GGNBP2Q9H3C7 697 aa14.66□□□□□ -0.06
PTPN21-205ENST00000554270 MFAP1P55081 439 aaKnown RBP14.65□□□□□ -0.06
PTPN21-205ENST00000554270 SAMD9LQ8IVG5 1584 aa14.65□□□□□ -0.06
PTPN21-205ENST00000554270 RAPGEF3O95398 923 aa14.65□□□□□ -0.06
PTPN21-205ENST00000554270 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
PTPN21-205ENST00000554270 MINK1Q8N4C8 1332 aaPredicted RBP14.65□□□□□ -0.06
PTPN21-205ENST00000554270 ABCA8O94911 1581 aa14.64□□□□□ -0.07
PTPN21-205ENST00000554270 TSR2Q969E8 191 aaKnown RBP14.64□□□□□ -0.07
PTPN21-205ENST00000554270 COL17A1Q9UMD9 1497 aaPredicted RBP14.64□□□□□ -0.07
PTPN21-205ENST00000554270 IGHDP01880 384 aa14.64□□□□□ -0.07
PTPN21-205ENST00000554270 ELL2O00472 640 aaPredicted RBP14.63□□□□□ -0.07
PTPN21-205ENST00000554270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.63□□□□□ -0.07
PTPN21-205ENST00000554270 MAGI2Q86UL8 1455 aa14.62□□□□□ -0.07
PTPN21-205ENST00000554270 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
PTPN21-205ENST00000554270 SOX12O15370 315 aa14.62□□□□□ -0.07
PTPN21-205ENST00000554270 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
PTPN21-205ENST00000554270 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
PTPN21-205ENST00000554270 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
PTPN21-205ENST00000554270 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
PTPN21-205ENST00000554270 FBLN1P23142 703 aa14.61□□□□□ -0.07
PTPN21-205ENST00000554270 SLC24A1O60721 1099 aa14.6□□□□□ -0.07
PTPN21-205ENST00000554270 SMC4Q9NTJ3 1288 aa14.6□□□□□ -0.07
PTPN21-205ENST00000554270 KDM5DQ9BY66 1539 aa14.6□□□□□ -0.07
PTPN21-205ENST00000554270 TTC37Q6PGP7 1564 aa14.59□□□□□ -0.07
PTPN21-205ENST00000554270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN21-205ENST00000554270 PLCH2O75038 1416 aa14.59□□□□□ -0.07
PTPN21-205ENST00000554270 SEC24BO95487 1268 aa14.59□□□□□ -0.07
PTPN21-205ENST00000554270 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.08
PTPN21-205ENST00000554270 NUTM2FA1L443 756 aa14.58□□□□□ -0.08
PTPN21-205ENST00000554270 C8orf34Q49A92 452 aa14.58□□□□□ -0.08
PTPN21-205ENST00000554270 RUNDC1Q96C34 613 aa14.57□□□□□ -0.08
PTPN21-205ENST00000554270 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
PTPN21-205ENST00000554270 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
PTPN21-205ENST00000554270 SCAF11Q99590 1463 aaKnown RBP14.56□□□□□ -0.08
PTPN21-205ENST00000554270 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
PTPN21-205ENST00000554270 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
PTPN21-205ENST00000554270 APBB1O00213 710 aa14.56□□□□□ -0.08
PTPN21-205ENST00000554270 PDZRN3Q9UPQ7 1066 aa14.55□□□□□ -0.08
PTPN21-205ENST00000554270 NOS1P29475 1434 aa14.54□□□□□ -0.08
PTPN21-205ENST00000554270 RLBP1P12271 317 aa14.54□□□□□ -0.08
PTPN21-205ENST00000554270 RWDD1Q9H446 243 aaPredicted RBP14.54□□□□□ -0.08
PTPN21-205ENST00000554270 UGGT1Q9NYU2 1555 aa14.54□□□□□ -0.08
PTPN21-205ENST00000554270 CROCC2H7BZ55 1655 aa14.53□□□□□ -0.08
PTPN21-205ENST00000554270 DUOX2Q9NRD8 1548 aa14.53□□□□□ -0.08
PTPN21-205ENST00000554270 HMOX1P09601 288 aa14.53□□□□□ -0.08
PTPN21-205ENST00000554270 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
PTPN21-205ENST00000554270 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.08
PTPN21-205ENST00000554270 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.08
PTPN21-205ENST00000554270 FANCAO15360 1455 aa14.52□□□□□ -0.08
PTPN21-205ENST00000554270 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
PTPN21-205ENST00000554270 EVC2Q86UK5 1308 aa14.52□□□□□ -0.09
PTPN21-205ENST00000554270 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.09
PTPN21-205ENST00000554270 PCDHB15Q9Y5E8 787 aa14.51□□□□□ -0.09
PTPN21-205ENST00000554270 BLMP54132 1417 aaPredicted RBP14.51□□□□□ -0.09
PTPN21-205ENST00000554270 RARSP54136 660 aaKnown RBP14.51□□□□□ -0.09
PTPN21-205ENST00000554270 ADCY10Q96PN6 1610 aa14.51□□□□□ -0.09
PTPN21-205ENST00000554270 ADGRL1O94910 1474 aa14.51□□□□□ -0.09
PTPN21-205ENST00000554270 CDC42BPBQ9Y5S2 1711 aa14.51□□□□□ -0.09
PTPN21-205ENST00000554270 ARHGEF5Q12774 1597 aa14.51□□□□□ -0.09
PTPN21-205ENST00000554270 KDM2BQ8NHM5 1336 aa14.51□□□□□ -0.09
PTPN21-205ENST00000554270 RIPK4P57078 832 aa14.5□□□□□ -0.09
PTPN21-205ENST00000554270 THUMPD2Q9BTF0 503 aaKnown RBP14.5□□□□□ -0.09
PTPN21-205ENST00000554270 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms