RNA–Protein interactions for RNA: ENST00000554118.1

LRP1-206, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 418 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-206ENST00000554118 DUOX2Q9NRD8 1548 aa11.62□□□□□ -0.55
LRP1-206ENST00000554118 COL16A1Q07092 1604 aaPredicted RBP11.62□□□□□ -0.55
LRP1-206ENST00000554118 RRP7BPQ9NSQ0 103 aa11.62□□□□□ -0.55
LRP1-206ENST00000554118 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
LRP1-206ENST00000554118 DEFB132Q7Z7B7 95 aa11.61□□□□□ -0.55
LRP1-206ENST00000554118 A2MP01023 1474 aa11.6□□□□□ -0.55
LRP1-206ENST00000554118 HRCP23327 699 aa11.6□□□□□ -0.55
LRP1-206ENST00000554118 NAIPQ13075 1403 aa11.6□□□□□ -0.55
LRP1-206ENST00000554118 MSH6P52701 1360 aa11.59□□□□□ -0.55
LRP1-206ENST00000554118 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
LRP1-206ENST00000554118 NLRP1Q9C000 1473 aa11.58□□□□□ -0.56
LRP1-206ENST00000554118 EIF2AK4Q9P2K8 1649 aaKnown RBP11.58□□□□□ -0.56
LRP1-206ENST00000554118 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
LRP1-206ENST00000554118 ERBINQ96RT1 1412 aa11.58□□□□□ -0.56
LRP1-206ENST00000554118 SETD5Q9C0A6 1442 aa11.58□□□□□ -0.56
LRP1-206ENST00000554118 ANKRD50Q9ULJ7 1429 aa11.58□□□□□ -0.56
LRP1-206ENST00000554118 DHX29Q7Z478 1369 aaKnown RBP11.57□□□□□ -0.56
LRP1-206ENST00000554118 LTKP29376 864 aa11.56□□□□□ -0.56
LRP1-206ENST00000554118 KCNA6P17658 529 aa11.55□□□□□ -0.56
LRP1-206ENST00000554118 C1QTNF8P60827 252 aa11.55□□□□□ -0.56
LRP1-206ENST00000554118 PZPP20742 1482 aa11.55□□□□□ -0.56
LRP1-206ENST00000554118 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
LRP1-206ENST00000554118 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
LRP1-206ENST00000554118 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
LRP1-206ENST00000554118 SCAF11Q99590 1463 aaKnown RBP11.54□□□□□ -0.56
LRP1-206ENST00000554118 WASHC2CQ9Y4E1 1318 aa11.54□□□□□ -0.56
LRP1-206ENST00000554118 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
LRP1-206ENST00000554118 KIF3BO15066 747 aa11.52□□□□□ -0.57
LRP1-206ENST00000554118 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
LRP1-206ENST00000554118 UNC13BO14795 1591 aa11.52□□□□□ -0.57
LRP1-206ENST00000554118 NWD1Q149M9 1564 aa11.51□□□□□ -0.57
LRP1-206ENST00000554118 NHSL1Q5SYE7 1610 aa11.51□□□□□ -0.57
LRP1-206ENST00000554118 ZNF784Q8NCA9 323 aaPredicted RBP11.51□□□□□ -0.57
LRP1-206ENST00000554118 USP21Q9UK80 565 aa11.51□□□□□ -0.57
LRP1-206ENST00000554118 EID1Q9Y6B2 187 aa11.51□□□□□ -0.57
LRP1-206ENST00000554118 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
LRP1-206ENST00000554118 EP400Q96L91 3159 aa11.5□□□□□ -0.57
LRP1-206ENST00000554118 SLC26A8Q96RN1 970 aa11.5□□□□□ -0.57
LRP1-206ENST00000554118 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
LRP1-206ENST00000554118 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
LRP1-206ENST00000554118 MROH1Q8NDA8 1641 aa11.49□□□□□ -0.57
LRP1-206ENST00000554118 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
LRP1-206ENST00000554118 BLMP54132 1417 aaPredicted RBP11.49□□□□□ -0.57
LRP1-206ENST00000554118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
LRP1-206ENST00000554118 KANK1Q14678 1352 aa11.48□□□□□ -0.57
LRP1-206ENST00000554118 IQGAP3Q86VI3 1631 aa11.47□□□□□ -0.57
LRP1-206ENST00000554118 NUP155O75694 1391 aa11.46□□□□□ -0.57
LRP1-206ENST00000554118 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
LRP1-206ENST00000554118 CEP152O94986 1710 aa11.46□□□□□ -0.58
LRP1-206ENST00000554118 BCANQ96GW7 911 aa11.45□□□□□ -0.58
LRP1-206ENST00000554118 AHDC1Q5TGY3 1603 aaPredicted RBP11.45□□□□□ -0.58
LRP1-206ENST00000554118 ABCC3O15438 1527 aa11.44□□□□□ -0.58
LRP1-206ENST00000554118 TET3O43151 1660 aa11.43□□□□□ -0.58
LRP1-206ENST00000554118 DIP2AQ14689 1571 aa11.43□□□□□ -0.58
LRP1-206ENST00000554118 ATF3P18847 181 aa11.43□□□□□ -0.58
LRP1-206ENST00000554118 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
LRP1-206ENST00000554118 LMTK2Q8IWU2 1503 aa11.42□□□□□ -0.58
LRP1-206ENST00000554118 EFCAB6Q5THR3 1501 aa11.41□□□□□ -0.58
LRP1-206ENST00000554118 BRINP3Q76B58 766 aa11.41□□□□□ -0.58
LRP1-206ENST00000554118 LRRC59Q96AG4 307 aaKnown RBP11.41□□□□□ -0.58
LRP1-206ENST00000554118 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
LRP1-206ENST00000554118 UBR1Q8IWV7 1749 aa11.4□□□□□ -0.58
LRP1-206ENST00000554118 KDM5AP29375 1690 aaKnown RBP11.4□□□□□ -0.58
LRP1-206ENST00000554118 CAPN15O75808 1086 aa11.4□□□□□ -0.58
LRP1-206ENST00000554118 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
LRP1-206ENST00000554118 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
LRP1-206ENST00000554118 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
LRP1-206ENST00000554118 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
LRP1-206ENST00000554118 E9PCH4 1651 aa11.39□□□□□ -0.59
LRP1-206ENST00000554118 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
LRP1-206ENST00000554118 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
LRP1-206ENST00000554118 ARHGAP23Q9P227 1491 aa11.38□□□□□ -0.59
LRP1-206ENST00000554118 ATRNO75882 1429 aa11.38□□□□□ -0.59
LRP1-206ENST00000554118 BAG6P46379 1132 aa11.38□□□□□ -0.59
LRP1-206ENST00000554118 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
LRP1-206ENST00000554118 CFAP65Q6ZU64 1925 aaKnown RBP11.38□□□□□ -0.59
LRP1-206ENST00000554118 SLIT1O75093 1534 aa11.37□□□□□ -0.59
LRP1-206ENST00000554118 PNPLA6Q8IY17 1366 aa11.37□□□□□ -0.59
LRP1-206ENST00000554118 RPRD2Q5VT52 1461 aaKnown RBP11.37□□□□□ -0.59
LRP1-206ENST00000554118 ARHGAP31Q2M1Z3 1444 aa11.36□□□□□ -0.59
LRP1-206ENST00000554118 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
LRP1-206ENST00000554118 EN1Q05925 392 aaPredicted RBP11.35□□□□□ -0.59
LRP1-206ENST00000554118 FNBP4Q8N3X1 1017 aaPredicted RBP11.35□□□□□ -0.59
LRP1-206ENST00000554118 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
LRP1-206ENST00000554118 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
LRP1-206ENST00000554118 ERVK-7P63135 1459 aa11.35□□□□□ -0.59
LRP1-206ENST00000554118 TMEM2Q9UHN6 1383 aa11.34□□□□□ -0.59
LRP1-206ENST00000554118 SLC34A2O95436 690 aa11.34□□□□□ -0.59
LRP1-206ENST00000554118 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
LRP1-206ENST00000554118 TRPM2O94759 1503 aa11.32□□□□□ -0.6
LRP1-206ENST00000554118 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
LRP1-206ENST00000554118 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.31□□□□□ -0.6
LRP1-206ENST00000554118 NOS1P29475 1434 aa11.3□□□□□ -0.6
LRP1-206ENST00000554118 CEP350Q5VT06 3117 aa11.3□□□□□ -0.6
LRP1-206ENST00000554118 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
LRP1-206ENST00000554118 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
LRP1-206ENST00000554118 ANKRD30BQ9BXX2 1392 aa11.29□□□□□ -0.6
LRP1-206ENST00000554118 ASXL1Q8IXJ9 1541 aa11.29□□□□□ -0.6
LRP1-206ENST00000554118 CLTCL1P53675 1640 aa11.28□□□□□ -0.6
LRP1-206ENST00000554118 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms