RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 ABCA9Q8IUA7 1624 aa10.32□□□□□ -0.76
CNOT2-240ENST00000552599 AEBP1Q8IUX7 1158 aa10.32□□□□□ -0.76
CNOT2-240ENST00000552599 TRAPPC8Q9Y2L5 1435 aa10.32□□□□□ -0.76
CNOT2-240ENST00000552599 ACIN1Q9UKV3 1341 aaKnown RBP10.32□□□□□ -0.76
CNOT2-240ENST00000552599 TMED8Q6PL24 325 aaPredicted RBP10.32□□□□□ -0.76
CNOT2-240ENST00000552599 NUP155O75694 1391 aa10.31□□□□□ -0.76
CNOT2-240ENST00000552599 ARAP3Q8WWN8 1544 aa10.31□□□□□ -0.76
CNOT2-240ENST00000552599 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.31□□□□□ -0.76
CNOT2-240ENST00000552599 PLXNC1O60486 1568 aa10.3□□□□□ -0.76
CNOT2-240ENST00000552599 FANCAO15360 1455 aa10.3□□□□□ -0.76
CNOT2-240ENST00000552599 RPRD2Q5VT52 1461 aaKnown RBP10.3□□□□□ -0.76
CNOT2-240ENST00000552599 KDM5DQ9BY66 1539 aa10.3□□□□□ -0.76
CNOT2-240ENST00000552599 CERS3Q8IU89 383 aa10.29□□□□□ -0.76
CNOT2-240ENST00000552599 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
CNOT2-240ENST00000552599 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
CNOT2-240ENST00000552599 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
CNOT2-240ENST00000552599 HIRIP3Q9BW71 556 aaPredicted RBP10.28□□□□□ -0.76
CNOT2-240ENST00000552599 HS6ST3Q8IZP7 471 aa10.28□□□□□ -0.76
CNOT2-240ENST00000552599 PPM1GO15355 546 aaPredicted RBP10.27□□□□□ -0.77
CNOT2-240ENST00000552599 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
CNOT2-240ENST00000552599 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
CNOT2-240ENST00000552599 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
CNOT2-240ENST00000552599 FAM135AQ9P2D6 1515 aa10.26□□□□□ -0.77
CNOT2-240ENST00000552599 UNC13BO14795 1591 aa10.26□□□□□ -0.77
CNOT2-240ENST00000552599 DUOX2Q9NRD8 1548 aa10.26□□□□□ -0.77
CNOT2-240ENST00000552599 ADGRL1O94910 1474 aa10.26□□□□□ -0.77
CNOT2-240ENST00000552599 NUBP1P53384 320 aa10.25□□□□□ -0.77
CNOT2-240ENST00000552599 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
CNOT2-240ENST00000552599 SPAG9O60271 1321 aaKnown RBP10.25□□□□□ -0.77
CNOT2-240ENST00000552599 SCAPERQ9BY12 1400 aa10.25□□□□□ -0.77
CNOT2-240ENST00000552599 RIMBP3CA6NJZ7 1639 aa10.24□□□□□ -0.77
CNOT2-240ENST00000552599 RIMBP3BA6NNM3 1639 aa10.24□□□□□ -0.77
CNOT2-240ENST00000552599 RIMBP3Q9UFD9 1639 aa10.24□□□□□ -0.77
CNOT2-240ENST00000552599 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
CNOT2-240ENST00000552599 CYB5RLQ6IPT4 315 aa10.24□□□□□ -0.77
CNOT2-240ENST00000552599 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
CNOT2-240ENST00000552599 INO80Q9ULG1 1556 aaPredicted RBP10.23□□□□□ -0.77
CNOT2-240ENST00000552599 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
CNOT2-240ENST00000552599 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
CNOT2-240ENST00000552599 PSMD1Q99460 953 aa10.23□□□□□ -0.77
CNOT2-240ENST00000552599 CD109Q6YHK3 1445 aa10.23□□□□□ -0.77
CNOT2-240ENST00000552599 ATP7AQ04656 1500 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 RTEL1-TNFRSF6BF6WH68 1400 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 ZNF526Q8TF50 670 aaPredicted RBP10.22□□□□□ -0.77
CNOT2-240ENST00000552599 IQGAP3Q86VI3 1631 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 MAGI2Q86UL8 1455 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 GSE1Q14687 1217 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 CCDC82Q8N4S0 544 aa10.22□□□□□ -0.77
CNOT2-240ENST00000552599 ARID4BQ4LE39 1312 aaPredicted RBP10.21□□□□□ -0.78
CNOT2-240ENST00000552599 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.78
CNOT2-240ENST00000552599 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.78
CNOT2-240ENST00000552599 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
CNOT2-240ENST00000552599 NAP1L5Q96NT1 182 aaPredicted RBP10.19□□□□□ -0.78
CNOT2-240ENST00000552599 DDX10Q13206 875 aaKnown RBP10.19□□□□□ -0.78
CNOT2-240ENST00000552599 PLA2R1Q13018 1463 aa10.19□□□□□ -0.78
CNOT2-240ENST00000552599 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
CNOT2-240ENST00000552599 KIDINS220Q9ULH0 1771 aa10.18□□□□□ -0.78
CNOT2-240ENST00000552599 HSPA5P11021 654 aaKnown RBP10.18□□□□□ -0.78
CNOT2-240ENST00000552599 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
CNOT2-240ENST00000552599 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
CNOT2-240ENST00000552599 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
CNOT2-240ENST00000552599 CLSTN1O94985 981 aa10.17□□□□□ -0.78
CNOT2-240ENST00000552599 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
CNOT2-240ENST00000552599 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
CNOT2-240ENST00000552599 DEPDC5O75140 1603 aa10.16□□□□□ -0.78
CNOT2-240ENST00000552599 E9PSI1 815 aa10.16□□□□□ -0.78
CNOT2-240ENST00000552599 GZF1Q9H116 711 aaPredicted RBP10.16□□□□□ -0.78
CNOT2-240ENST00000552599 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
CNOT2-240ENST00000552599 YTHDC1Q96MU7 727 aaKnown RBP10.16□□□□□ -0.78
CNOT2-240ENST00000552599 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
CNOT2-240ENST00000552599 KDM5CP41229 1560 aa10.16□□□□□ -0.78
CNOT2-240ENST00000552599 CCDC144AA2RUR9 1427 aa10.15□□□□□ -0.78
CNOT2-240ENST00000552599 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
CNOT2-240ENST00000552599 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.79
CNOT2-240ENST00000552599 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.79
CNOT2-240ENST00000552599 SPDYE1Q8NFV5 336 aaPredicted RBP10.15□□□□□ -0.79
CNOT2-240ENST00000552599 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.79
CNOT2-240ENST00000552599 E9PCH4 1651 aa10.14□□□□□ -0.79
CNOT2-240ENST00000552599 KIF3BO15066 747 aa10.14□□□□□ -0.79
CNOT2-240ENST00000552599 PRDM16Q9HAZ2 1276 aa10.14□□□□□ -0.79
CNOT2-240ENST00000552599 NEO1Q92859 1461 aa10.14□□□□□ -0.79
CNOT2-240ENST00000552599 MROH1Q8NDA8 1641 aa10.14□□□□□ -0.79
CNOT2-240ENST00000552599 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
CNOT2-240ENST00000552599 STK25O00506 426 aa10.13□□□□□ -0.79
CNOT2-240ENST00000552599 RAPGEF3O95398 923 aa10.13□□□□□ -0.79
CNOT2-240ENST00000552599 EIF2AK4Q9P2K8 1649 aaKnown RBP10.13□□□□□ -0.79
CNOT2-240ENST00000552599 HECW2Q9P2P5 1572 aa10.13□□□□□ -0.79
CNOT2-240ENST00000552599 PRDM10Q9NQV6 1147 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 FRMPD1Q5SYB0 1578 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 VWDEQ8N2E2 1590 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 PRDM15P57071 1507 aaPredicted RBP10.12□□□□□ -0.79
CNOT2-240ENST00000552599 ATP10AO60312 1499 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 UHRF1BP1Q6BDS2 1440 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 RASEFQ8IZ41 740 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 DCAF11Q8TEB1 546 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 ABCA6Q8N139 1617 aa10.12□□□□□ -0.79
CNOT2-240ENST00000552599 GLI2P10070 1586 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms