RNA–Protein interactions for RNA: ENST00000552140.5

NPIPA3-203, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-203ENST00000552140 AFF2P51816 1311 aa11.17□□□□□ -0.62
NPIPA3-203ENST00000552140 BCANQ96GW7 911 aa11.17□□□□□ -0.62
NPIPA3-203ENST00000552140 RGS12O14924 1447 aa11.17□□□□□ -0.62
NPIPA3-203ENST00000552140 EID1Q9Y6B2 187 aa11.16□□□□□ -0.62
NPIPA3-203ENST00000552140 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
NPIPA3-203ENST00000552140 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
NPIPA3-203ENST00000552140 SLC26A8Q96RN1 970 aa11.15□□□□□ -0.62
NPIPA3-203ENST00000552140 QTRT2Q9H974 415 aaKnown RBP11.15□□□□□ -0.62
NPIPA3-203ENST00000552140 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
NPIPA3-203ENST00000552140 MSH6P52701 1360 aa11.14□□□□□ -0.63
NPIPA3-203ENST00000552140 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
NPIPA3-203ENST00000552140 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
NPIPA3-203ENST00000552140 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
NPIPA3-203ENST00000552140 RTEL1-TNFRSF6BF6WH68 1400 aa11.13□□□□□ -0.63
NPIPA3-203ENST00000552140 EEA1Q15075 1411 aa11.13□□□□□ -0.63
NPIPA3-203ENST00000552140 FGD6Q6ZV73 1430 aa11.13□□□□□ -0.63
NPIPA3-203ENST00000552140 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
NPIPA3-203ENST00000552140 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
NPIPA3-203ENST00000552140 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
NPIPA3-203ENST00000552140 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
NPIPA3-203ENST00000552140 SLIT1O75093 1534 aa11.11□□□□□ -0.63
NPIPA3-203ENST00000552140 PRDM15P57071 1507 aaPredicted RBP11.11□□□□□ -0.63
NPIPA3-203ENST00000552140 ATAD2Q6PL18 1390 aa11.1□□□□□ -0.63
NPIPA3-203ENST00000552140 C8orf37Q96NL8 207 aa11.09□□□□□ -0.63
NPIPA3-203ENST00000552140 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
NPIPA3-203ENST00000552140 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
NPIPA3-203ENST00000552140 ABCC3O15438 1527 aa11.08□□□□□ -0.64
NPIPA3-203ENST00000552140 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
NPIPA3-203ENST00000552140 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
NPIPA3-203ENST00000552140 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
NPIPA3-203ENST00000552140 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
NPIPA3-203ENST00000552140 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
NPIPA3-203ENST00000552140 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
NPIPA3-203ENST00000552140 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
NPIPA3-203ENST00000552140 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
NPIPA3-203ENST00000552140 TET3O43151 1660 aa11.04□□□□□ -0.64
NPIPA3-203ENST00000552140 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
NPIPA3-203ENST00000552140 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
NPIPA3-203ENST00000552140 KDM5AP29375 1690 aaKnown RBP11.03□□□□□ -0.64
NPIPA3-203ENST00000552140 NWD1Q149M9 1564 aa11.03□□□□□ -0.64
NPIPA3-203ENST00000552140 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
NPIPA3-203ENST00000552140 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
NPIPA3-203ENST00000552140 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
NPIPA3-203ENST00000552140 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
NPIPA3-203ENST00000552140 CCDC141Q6ZP82 1450 aa11.01□□□□□ -0.65
NPIPA3-203ENST00000552140 ATF3P18847 181 aa11.01□□□□□ -0.65
NPIPA3-203ENST00000552140 IDI1Q13907 227 aa11□□□□□ -0.65
NPIPA3-203ENST00000552140 CADPS2Q86UW7 1296 aa11□□□□□ -0.65
NPIPA3-203ENST00000552140 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
NPIPA3-203ENST00000552140 CEP152O94986 1710 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 TSPY4P0CV99 314 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 TSPY10P0CW01 314 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 C19orf44Q9H6X5 657 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 USP21Q9UK80 565 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 FYCO1Q9BQS8 1478 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
NPIPA3-203ENST00000552140 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
NPIPA3-203ENST00000552140 DDX17Q92841 729 aaKnown RBP10.98□□□□□ -0.65
NPIPA3-203ENST00000552140 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 EFCAB6Q5THR3 1501 aa10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 LRP5O75197 1615 aa10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 MROH1Q8NDA8 1641 aa10.97□□□□□ -0.65
NPIPA3-203ENST00000552140 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.96□□□□□ -0.65
NPIPA3-203ENST00000552140 SETD5Q9C0A6 1442 aa10.96□□□□□ -0.65
NPIPA3-203ENST00000552140 YY1P25490 414 aa10.96□□□□□ -0.65
NPIPA3-203ENST00000552140 PNPLA6Q8IY17 1366 aa10.95□□□□□ -0.66
NPIPA3-203ENST00000552140 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
NPIPA3-203ENST00000552140 ARHGAP31Q2M1Z3 1444 aa10.94□□□□□ -0.66
NPIPA3-203ENST00000552140 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
NPIPA3-203ENST00000552140 CHD2O14647 1828 aaKnown RBP10.94□□□□□ -0.66
NPIPA3-203ENST00000552140 HRCP23327 699 aa10.93□□□□□ -0.66
NPIPA3-203ENST00000552140 POTEHQ6S545 545 aa10.93□□□□□ -0.66
NPIPA3-203ENST00000552140 ASXL1Q8IXJ9 1541 aa10.92□□□□□ -0.66
NPIPA3-203ENST00000552140 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
NPIPA3-203ENST00000552140 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 REM2Q8IYK8 340 aaPredicted RBP10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 FNBP4Q8N3X1 1017 aaPredicted RBP10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 ATRNO75882 1429 aa10.91□□□□□ -0.66
NPIPA3-203ENST00000552140 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
NPIPA3-203ENST00000552140 PLEKHG1Q9ULL1 1385 aa10.9□□□□□ -0.67
NPIPA3-203ENST00000552140 SF3B2Q13435 895 aaKnown RBP10.89□□□□□ -0.67
NPIPA3-203ENST00000552140 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
NPIPA3-203ENST00000552140 ARHGEF5Q12774 1597 aa10.88□□□□□ -0.67
NPIPA3-203ENST00000552140 CEP162Q5TB80 1403 aa10.88□□□□□ -0.67
NPIPA3-203ENST00000552140 AMOTL2Q9Y2J4 779 aa10.88□□□□□ -0.67
NPIPA3-203ENST00000552140 NHSL1Q5SYE7 1610 aa10.87□□□□□ -0.67
NPIPA3-203ENST00000552140 MST1RQ04912 1400 aa10.87□□□□□ -0.67
NPIPA3-203ENST00000552140 GJD4Q96KN9 370 aaPredicted RBP10.87□□□□□ -0.67
NPIPA3-203ENST00000552140 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
NPIPA3-203ENST00000552140 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms