RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 C20orf194Q5TEA3 1177 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 ANTXR1Q9H6X2 564 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 SLFN5Q08AF3 891 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 CFDP1Q9UEE9 299 aaPredicted RBP6.36□□□□□ -1.39
LMO3-229ENST00000543721 CEP170Q5SW79 1584 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 SHANK2Q9UPX8 1470 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 USP19O94966 1318 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 ZNF521Q96K83 1311 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 ESPNB1AK53 854 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 TERF1P54274 439 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 CDCA8Q53HL2 280 aa6.36□□□□□ -1.39
LMO3-229ENST00000543721 NUP155O75694 1391 aa6.35□□□□□ -1.39
LMO3-229ENST00000543721 CROCC2H7BZ55 1655 aa6.35□□□□□ -1.39
LMO3-229ENST00000543721 E9PSI1 815 aa6.35□□□□□ -1.39
LMO3-229ENST00000543721 SKOR2Q2VWA4 1001 aaPredicted RBP6.35□□□□□ -1.39
LMO3-229ENST00000543721 NKTRP30414 1462 aaKnown RBP6.35□□□□□ -1.39
LMO3-229ENST00000543721 TRMT2AQ8IZ69 625 aaKnown RBP6.35□□□□□ -1.39
LMO3-229ENST00000543721 TROQ12816 1431 aaPredicted RBP6.35□□□□□ -1.39
LMO3-229ENST00000543721 KIAA0586Q9BVV6 1533 aa6.35□□□□□ -1.39
LMO3-229ENST00000543721 HOMEZQ8IX15 550 aa6.35□□□□□ -1.39
LMO3-229ENST00000543721 TBC1D32Q96NH3 1257 aa6.35□□□□□ -1.39
LMO3-229ENST00000543721 SLKQ9H2G2 1235 aaPredicted RBP6.35□□□□□ -1.39
LMO3-229ENST00000543721 EIF2AK4Q9P2K8 1649 aaKnown RBP6.34□□□□□ -1.39
LMO3-229ENST00000543721 TRAK2O60296 914 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 SKAP1Q86WV1 359 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 NUP160Q12769 1436 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 TDRD9Q8NDG6 1382 aaKnown RBP6.34□□□□□ -1.39
LMO3-229ENST00000543721 TRPM1Q7Z4N2 1603 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 PRAG1Q86YV5 1406 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 ANP32BQ92688 251 aaKnown RBP6.34□□□□□ -1.39
LMO3-229ENST00000543721 CLUAP1Q96AJ1 413 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 SCAPERQ9BY12 1400 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 RNF39Q9H2S5 420 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 ADAMTS8Q9UP79 889 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 KDM2AQ9Y2K7 1162 aa6.34□□□□□ -1.39
LMO3-229ENST00000543721 PIK3C2GO75747 1445 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 CC2D1BQ5T0F9 858 aaKnown RBP6.33□□□□□ -1.4
LMO3-229ENST00000543721 GRPEL1Q9HAV7 217 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 EIF4G3O43432 1585 aaKnown RBP6.33□□□□□ -1.4
LMO3-229ENST00000543721 PTPRGP23470 1445 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 ERBINQ96RT1 1412 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 MTERF4Q7Z6M4 381 aaKnown RBP6.33□□□□□ -1.4
LMO3-229ENST00000543721 PANK3Q9H999 370 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 KNSTRNQ9Y448 316 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 NPC1L1Q9UHC9 1359 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 ABCC2Q92887 1545 aa6.33□□□□□ -1.4
LMO3-229ENST00000543721 CALD1Q05682 793 aaKnown RBP6.33□□□□□ -1.4
LMO3-229ENST00000543721 CIZ1Q9ULV3 898 aaPredicted RBP6.33□□□□□ -1.4
LMO3-229ENST00000543721 ZNF644Q9H582 1327 aaPredicted RBP6.33□□□□□ -1.4
LMO3-229ENST00000543721 TBC1D2Q9BYX2 928 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 PLEKHH1Q9ULM0 1364 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 PRDM15P57071 1507 aaPredicted RBP6.32□□□□□ -1.4
LMO3-229ENST00000543721 CANXP27824 592 aaKnown RBP6.32□□□□□ -1.4
LMO3-229ENST00000543721 GBP4Q96PP9 640 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 RWDD1Q9H446 243 aaPredicted RBP6.32□□□□□ -1.4
LMO3-229ENST00000543721 RAPGEF6Q8TEU7 1601 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 ADCY10Q96PN6 1610 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 TSPY4P0CV99 314 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 TSPY10P0CW01 314 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
LMO3-229ENST00000543721 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
LMO3-229ENST00000543721 GPATCH8Q9UKJ3 1502 aaKnown RBP6.31□□□□□ -1.4
LMO3-229ENST00000543721 HSCBQ8IWL3 235 aa6.31□□□□□ -1.4
LMO3-229ENST00000543721 PLXNC1O60486 1568 aa6.31□□□□□ -1.4
LMO3-229ENST00000543721 NLRP1Q9C000 1473 aa6.31□□□□□ -1.4
LMO3-229ENST00000543721 URB2Q14146 1524 aaKnown RBP6.31□□□□□ -1.4
LMO3-229ENST00000543721 CCDC173Q0VFZ6 552 aa6.31□□□□□ -1.4
LMO3-229ENST00000543721 STAC3Q96MF2 364 aa6.31□□□□□ -1.4
LMO3-229ENST00000543721 MKRN4PQ13434 485 aaPredicted RBP6.3□□□□□ -1.4
LMO3-229ENST00000543721 RSPH4AQ5TD94 716 aa6.3□□□□□ -1.4
LMO3-229ENST00000543721 TESK2Q96S53 571 aa6.3□□□□□ -1.4
LMO3-229ENST00000543721 NUP153P49790 1475 aaKnown RBP6.3□□□□□ -1.4
LMO3-229ENST00000543721 C9orf84Q5VXU9 1444 aa6.3□□□□□ -1.4
LMO3-229ENST00000543721 IGHDP01880 384 aa6.3□□□□□ -1.4
LMO3-229ENST00000543721 GOLGA6L22H0YM25 854 aa6.3□□□□□ -1.4
LMO3-229ENST00000543721 HS1BP3Q53T59 392 aa6.3□□□□□ -1.4
LMO3-229ENST00000543721 CCDC141Q6ZP82 1450 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 PANK2Q9BZ23 570 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 KIAA0556O60303 1618 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 PDS5BQ9NTI5 1447 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 ADAMTS12P58397 1594 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 ZSCAN30Q86W11 494 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 GZF1Q9H116 711 aaPredicted RBP6.29□□□□□ -1.4
LMO3-229ENST00000543721 PODXL2Q9NZ53 605 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 DISP3Q9P2K9 1392 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 ASXL1Q8IXJ9 1541 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 OFD1O75665 1012 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 MSNP26038 577 aaKnown RBP6.29□□□□□ -1.4
LMO3-229ENST00000543721 SNX21Q969T3 373 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 C22orf23Q9BZE7 217 aa6.29□□□□□ -1.4
LMO3-229ENST00000543721 ABCC10Q5T3U5 1492 aa6.28□□□□□ -1.4
LMO3-229ENST00000543721 SEC24BO95487 1268 aa6.28□□□□□ -1.4
LMO3-229ENST00000543721 PPP1R9BQ96SB3 815 aa6.28□□□□□ -1.4
LMO3-229ENST00000543721 SYNMO15061 1565 aa6.28□□□□□ -1.4
LMO3-229ENST00000543721 ARHGEF5Q12774 1597 aa6.28□□□□□ -1.4
LMO3-229ENST00000543721 PBRM1Q86U86 1689 aa6.28□□□□□ -1.4
LMO3-229ENST00000543721 IBTKQ9P2D0 1353 aaPredicted RBP6.28□□□□□ -1.4
LMO3-229ENST00000543721 ZNF777Q9ULD5 760 aaPredicted RBP6.28□□□□□ -1.4
LMO3-229ENST00000543721 NCLP19338 710 aaKnown RBP6.27□□□□□ -1.4
LMO3-229ENST00000543721 SPINK5Q9NQ38 1064 aaPredicted RBP6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms