RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
RAP1B-230ENST00000543697 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
RAP1B-230ENST00000543697 PCDHGA10Q9Y5H3 936 aa12.57□□□□□ -0.4
RAP1B-230ENST00000543697 KIF21BO75037 1637 aa12.57□□□□□ -0.4
RAP1B-230ENST00000543697 GPBP1L1Q9HC44 474 aaPredicted RBP12.56□□□□□ -0.4
RAP1B-230ENST00000543697 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
RAP1B-230ENST00000543697 HSPA2P54652 639 aa12.55□□□□□ -0.4
RAP1B-230ENST00000543697 FOSBP53539 338 aa12.54□□□□□ -0.4
RAP1B-230ENST00000543697 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
RAP1B-230ENST00000543697 MAP3K4Q9Y6R4 1608 aa12.52□□□□□ -0.4
RAP1B-230ENST00000543697 SNPHO15079 494 aa12.52□□□□□ -0.41
RAP1B-230ENST00000543697 GOPCQ9HD26 462 aa12.52□□□□□ -0.41
RAP1B-230ENST00000543697 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
RAP1B-230ENST00000543697 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
RAP1B-230ENST00000543697 ZDHHC16Q969W1 377 aa12.51□□□□□ -0.41
RAP1B-230ENST00000543697 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
RAP1B-230ENST00000543697 OATP04181 439 aa12.5□□□□□ -0.41
RAP1B-230ENST00000543697 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
RAP1B-230ENST00000543697 PARP9Q8IXQ6 854 aa12.5□□□□□ -0.41
RAP1B-230ENST00000543697 ASXL2Q76L83 1435 aa12.5□□□□□ -0.41
RAP1B-230ENST00000543697 TEX14Q8IWB6 1497 aa12.49□□□□□ -0.41
RAP1B-230ENST00000543697 CLCN1P35523 988 aa12.49□□□□□ -0.41
RAP1B-230ENST00000543697 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
RAP1B-230ENST00000543697 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
RAP1B-230ENST00000543697 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
RAP1B-230ENST00000543697 FECHP22830 423 aa12.47□□□□□ -0.41
RAP1B-230ENST00000543697 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
RAP1B-230ENST00000543697 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.41
RAP1B-230ENST00000543697 CDHR5Q9HBB8 845 aa12.46□□□□□ -0.41
RAP1B-230ENST00000543697 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
RAP1B-230ENST00000543697 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
RAP1B-230ENST00000543697 HOXB3P14651 431 aaPredicted RBP12.44□□□□□ -0.42
RAP1B-230ENST00000543697 FHAD1B1AJZ9 1412 aa12.44□□□□□ -0.42
RAP1B-230ENST00000543697 EPRSP07814 1512 aaKnown RBP12.43□□□□□ -0.42
RAP1B-230ENST00000543697 TSR1Q2NL82 804 aaKnown RBP12.43□□□□□ -0.42
RAP1B-230ENST00000543697 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
RAP1B-230ENST00000543697 GPR153Q6NV75 609 aa12.43□□□□□ -0.42
RAP1B-230ENST00000543697 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
RAP1B-230ENST00000543697 MADDQ8WXG6 1647 aa12.43□□□□□ -0.42
RAP1B-230ENST00000543697 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
RAP1B-230ENST00000543697 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
RAP1B-230ENST00000543697 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
RAP1B-230ENST00000543697 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
RAP1B-230ENST00000543697 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
RAP1B-230ENST00000543697 NUDT7P0C024 238 aa12.41□□□□□ -0.42
RAP1B-230ENST00000543697 MED1Q15648 1581 aaPredicted RBP12.41□□□□□ -0.42
RAP1B-230ENST00000543697 SRCAPQ6ZRS2 3230 aa12.4□□□□□ -0.42
RAP1B-230ENST00000543697 ARSIQ5FYB1 569 aa12.4□□□□□ -0.42
RAP1B-230ENST00000543697 KIAA0586Q9BVV6 1533 aa12.4□□□□□ -0.42
RAP1B-230ENST00000543697 BCORL1Q5H9F3 1711 aa12.4□□□□□ -0.43
RAP1B-230ENST00000543697 TTC13Q8NBP0 860 aa12.39□□□□□ -0.43
RAP1B-230ENST00000543697 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
RAP1B-230ENST00000543697 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
RAP1B-230ENST00000543697 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
RAP1B-230ENST00000543697 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
RAP1B-230ENST00000543697 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
RAP1B-230ENST00000543697 PRSS12P56730 875 aa12.37□□□□□ -0.43
RAP1B-230ENST00000543697 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
RAP1B-230ENST00000543697 CUL7Q14999 1698 aa12.37□□□□□ -0.43
RAP1B-230ENST00000543697 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
RAP1B-230ENST00000543697 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
RAP1B-230ENST00000543697 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
RAP1B-230ENST00000543697 ADAM33Q9BZ11 813 aa12.35□□□□□ -0.43
RAP1B-230ENST00000543697 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
RAP1B-230ENST00000543697 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
RAP1B-230ENST00000543697 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
RAP1B-230ENST00000543697 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
RAP1B-230ENST00000543697 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
RAP1B-230ENST00000543697 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
RAP1B-230ENST00000543697 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
RAP1B-230ENST00000543697 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
RAP1B-230ENST00000543697 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
RAP1B-230ENST00000543697 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
RAP1B-230ENST00000543697 PTPREP23469 700 aa12.33□□□□□ -0.44
RAP1B-230ENST00000543697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
RAP1B-230ENST00000543697 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
RAP1B-230ENST00000543697 CDCA7LQ96GN5 454 aa12.32□□□□□ -0.44
RAP1B-230ENST00000543697 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
RAP1B-230ENST00000543697 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
RAP1B-230ENST00000543697 SH3D19Q5HYK7 790 aa12.31□□□□□ -0.44
RAP1B-230ENST00000543697 PCMTD1Q96MG8 357 aaPredicted RBP12.31□□□□□ -0.44
RAP1B-230ENST00000543697 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
RAP1B-230ENST00000543697 IGF1RP08069 1367 aa12.3□□□□□ -0.44
RAP1B-230ENST00000543697 FLIIQ13045 1269 aa12.3□□□□□ -0.44
RAP1B-230ENST00000543697 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
RAP1B-230ENST00000543697 MS4A1P11836 297 aa12.29□□□□□ -0.44
RAP1B-230ENST00000543697 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
RAP1B-230ENST00000543697 PTPRGP23470 1445 aa12.28□□□□□ -0.44
RAP1B-230ENST00000543697 MAGI3Q5TCQ9 1506 aa12.28□□□□□ -0.44
RAP1B-230ENST00000543697 SSTR3P32745 418 aaPredicted RBP12.28□□□□□ -0.44
RAP1B-230ENST00000543697 FAM217BQ9NTX9 383 aaPredicted RBP12.28□□□□□ -0.44
RAP1B-230ENST00000543697 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
RAP1B-230ENST00000543697 NBPF26B4DH59 902 aa12.27□□□□□ -0.45
RAP1B-230ENST00000543697 UHRF1BP1LA0JNW5 1464 aa12.27□□□□□ -0.45
RAP1B-230ENST00000543697 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
RAP1B-230ENST00000543697 KHSRPQ92945 711 aaKnown RBP eCLIP12.26□□□□□ -0.454e-8■■■□□ 17
RAP1B-230ENST00000543697 PHOX2BQ99453 314 aa12.26□□□□□ -0.45
RAP1B-230ENST00000543697 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
RAP1B-230ENST00000543697 REPIN1Q9BWE0 567 aaKnown RBP12.25□□□□□ -0.45
RAP1B-230ENST00000543697 SKIV2LQ15477 1246 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms