RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 SPATA31A6Q5VVP1 1343 aa18.12■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 EP400Q96L91 3159 aa18.12■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 RGS12O14924 1447 aa18.1■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
CACNA1C-IT3-201ENST00000542680 CCER1Q8TC90 406 aaPredicted RBP18.08■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 MROH1Q8NDA8 1641 aa18.08■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 SLIT1O75093 1534 aa18.07■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 NUP155O75694 1391 aa18.06■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 KANK1Q14678 1352 aa18.04■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 WASHC2CQ9Y4E1 1318 aa18.04■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 LTKP29376 864 aa18.04■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 KIF3BO15066 747 aa18.03■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 TET3O43151 1660 aa18.03■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.48
CACNA1C-IT3-201ENST00000542680 FOXD1Q16676 465 aa18.01■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 LRP5O75197 1615 aa18.01■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 SLAIN2Q9P270 581 aa18■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 AHDC1Q5TGY3 1603 aaPredicted RBP18■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 NWD1Q149M9 1564 aa18■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 KDM5AP29375 1690 aaKnown RBP17.98■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 ABCC3O15438 1527 aa17.98■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 MSH6P52701 1360 aa17.97■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 ATAD2Q6PL18 1390 aa17.97■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 AFF2P51816 1311 aa17.97■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 NUTM2BA6NNL0 878 aaPredicted RBP17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 NUTM2EB1AL46 878 aaPredicted RBP17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 KCNA6P17658 529 aa17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 PROSER2Q86WR7 435 aaPredicted RBP17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 NUTM2AQ8IVF1 878 aaPredicted RBP17.96■□□□□ 0.47
CACNA1C-IT3-201ENST00000542680 RPRD2Q5VT52 1461 aaKnown RBP17.95■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 CEP152O94986 1710 aa17.95■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 E9PCH4 1651 aa17.93■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 ANKRD30BQ9BXX2 1392 aa17.92■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 ARHGAP31Q2M1Z3 1444 aa17.92■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.46
CACNA1C-IT3-201ENST00000542680 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 TRPM2O94759 1503 aa17.88■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 TMEM2Q9UHN6 1383 aa17.87■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 CHD2O14647 1828 aaKnown RBP17.84■□□□□ 0.45
CACNA1C-IT3-201ENST00000542680 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 NHSL1Q5SYE7 1610 aa17.81■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 NOS1P29475 1434 aa17.81■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 IFFO2Q5TF58 517 aa17.8■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 CCDC125Q86Z20 511 aa17.8■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 NGLY1Q96IV0 654 aa17.8■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 C8orf37Q96NL8 207 aa17.78■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
CACNA1C-IT3-201ENST00000542680 TONSLQ96HA7 1378 aa17.77■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 KIF1BO60333 1816 aa17.74■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
CACNA1C-IT3-201ENST00000542680 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 ADGRB3O60242 1522 aa17.7■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 SPATA31E1Q6ZUB1 1445 aa17.7■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 PNPLA6Q8IY17 1366 aa17.68■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 ATRNO75882 1429 aa17.68■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 BLMP54132 1417 aaPredicted RBP17.67■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 YY1P25490 414 aa17.67■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 STAC3Q96MF2 364 aa17.67■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 ATF3P18847 181 aa17.65■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 TRPC5Q9UL62 973 aaPredicted RBP17.65■□□□□ 0.42
CACNA1C-IT3-201ENST00000542680 C14orf37Q86TY3 774 aa17.64■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 L3MBTL2Q969R5 705 aa17.63■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 USP21Q9UK80 565 aa17.63■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 IDI1Q13907 227 aa17.6■□□□□ 0.41
CACNA1C-IT3-201ENST00000542680 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms